Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_B09
(771 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 33 0.013
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 27 0.49
AY146739-1|AAO12099.1| 176|Anopheles gambiae odorant-binding pr... 27 0.49
AF387857-1|AAL58707.1| 215|Anopheles gambiae integrase protein. 27 0.85
AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein pr... 25 2.6
AF387858-1|AAL58708.1| 209|Anopheles gambiae integrase protein. 25 2.6
AF387850-1|AAL58705.1| 209|Anopheles gambiae integrase protein. 25 2.6
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 32.7 bits (71), Expect = 0.013
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +3
Query: 528 ECHDCGELFKSKCKLRVHWKRAHQSSY-LKCERCKRQFKSFKAYNLHKK 671
+C C K LR+H + H + +KC+RC F +Y +H K
Sbjct: 299 QCKLCPTTCGRKTDLRIHVQNLHTADKPIKCKRCDSTFPDRYSYKMHAK 347
Score = 31.1 bits (67), Expect = 0.039
Identities = 37/161 (22%), Positives = 60/161 (37%), Gaps = 18/161 (11%)
Frame = +3
Query: 342 SYFTLINDTFKNPLIPKVDIKEELSFDNNCEFDTSFHENSVETEFE----IEDKNIKTSR 509
SY ++ND K+ L+ + + S DN +D + V+ E E + + +T +
Sbjct: 63 SYVLIMNDADKSTLVLNDEPSQGDSKDNEI-YDFEDPDYIVQEEQEPAKKTQTRGKRTQQ 121
Query: 510 ANDLSLECHDCGELFKSKCKLRVHWKRAHQSSYLKCERCKRQFKSFKA----YNLHKKIS 677
+ + C+ C L H K + KC C+R FK+ + N H
Sbjct: 122 STGSTYMCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVNTHTGTK 181
Query: 678 PAXCT-VAKFIXIEGEGKNRMFY---------CKDCDYKSI 770
P C GE + Y C +CDY S+
Sbjct: 182 PHRCKHCDNCFTTSGELIRHIRYRHTHERPHKCTECDYASV 222
Score = 29.1 bits (62), Expect = 0.16
Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 9/78 (11%)
Frame = +3
Query: 528 ECHDCGELFKSKCKLRVHWKRAHQSSYLK---------CERCKRQFKSFKAYNLHKKISP 680
+C C + F+ K L+ H H Y+ C CKR F+ H +
Sbjct: 384 KCDQCAQTFRQKQLLKRHMNYYHNPDYVAPTPKAKTHICPTCKRPFRHKGNLIRHMAMHD 443
Query: 681 AXCTVAKFIXIEGEGKNR 734
TV+K + EG+ +
Sbjct: 444 PESTVSKEMEALREGRQK 461
Score = 27.9 bits (59), Expect = 0.37
Identities = 13/54 (24%), Positives = 24/54 (44%)
Frame = +3
Query: 465 ETEFEIEDKNIKTSRANDLSLECHDCGELFKSKCKLRVHWKRAHQSSYLKCERC 626
+T+ I +N+ T+ D ++C C F + ++H K +CE C
Sbjct: 310 KTDLRIHVQNLHTA---DKPIKCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYC 360
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 27.5 bits (58), Expect = 0.49
Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +3
Query: 528 ECHDCGELFKSKCKLRVHWKRAHQSSY----LKCERCKRQFKSFKAYNLHKK 671
+C+ C +++K + + H H+ S +KC C + F + Y LH +
Sbjct: 350 QCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMR 401
>AY146739-1|AAO12099.1| 176|Anopheles gambiae odorant-binding
protein AgamOBP29 protein.
Length = 176
Score = 27.5 bits (58), Expect = 0.49
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 288 ECFHELEKAVKFKQKCEHS--YFTLINDTFK 374
ECFH L + K KC++S + T ++D F+
Sbjct: 132 ECFHMLGLDNRLKDKCDYSMRFVTCLSDRFE 162
>AF387857-1|AAL58707.1| 215|Anopheles gambiae integrase protein.
Length = 215
Score = 26.6 bits (56), Expect = 0.85
Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 303 LEKAVKFKQKCEHSYFTLINDTFKNPLIPKVDIKEELSFDNNCEF-DTSFHENSVETEFE 479
L + KF + + + + NP I + + ++L FD++ +F D S ++ V E
Sbjct: 60 LSRDAKFIEMEDFEHAAINRSKKTNPQIVEYEFDDDLPFDDDSDFDDDSDFDDDVGDRLE 119
Query: 480 IEDKN 494
E+++
Sbjct: 120 SEEED 124
>AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein
protein.
Length = 942
Score = 25.0 bits (52), Expect = 2.6
Identities = 13/72 (18%), Positives = 29/72 (40%)
Frame = +3
Query: 303 LEKAVKFKQKCEHSYFTLINDTFKNPLIPKVDIKEELSFDNNCEFDTSFHENSVETEFEI 482
L + KF + + + + NP I + + ++ FD++ +FD + E +
Sbjct: 290 LSRDAKFIEMEDFEHAAINRSKKTNPQIVEYEFDDDFPFDDDSDFDDDVGDRLESEEEDS 349
Query: 483 EDKNIKTSRAND 518
D+ + D
Sbjct: 350 TDETLIEEELTD 361
>AF387858-1|AAL58708.1| 209|Anopheles gambiae integrase protein.
Length = 209
Score = 25.0 bits (52), Expect = 2.6
Identities = 13/72 (18%), Positives = 29/72 (40%)
Frame = +3
Query: 303 LEKAVKFKQKCEHSYFTLINDTFKNPLIPKVDIKEELSFDNNCEFDTSFHENSVETEFEI 482
L + KF + + + + NP I + + ++ FD++ +FD + E +
Sbjct: 60 LSRDAKFIEMEDFEHAAINRSKKTNPQIVEYEFDDDFPFDDDSDFDDDVGDRLESEEEDS 119
Query: 483 EDKNIKTSRAND 518
D+ + D
Sbjct: 120 TDETLIEEELTD 131
>AF387850-1|AAL58705.1| 209|Anopheles gambiae integrase protein.
Length = 209
Score = 25.0 bits (52), Expect = 2.6
Identities = 13/72 (18%), Positives = 29/72 (40%)
Frame = +3
Query: 303 LEKAVKFKQKCEHSYFTLINDTFKNPLIPKVDIKEELSFDNNCEFDTSFHENSVETEFEI 482
L + KF + + + + NP I + + ++ FD++ +FD + E +
Sbjct: 60 LSRDAKFIEMEDFEHAAINRSKKTNPQIVEYEFDDDFPFDDDSDFDDDVGDRLESEEEDS 119
Query: 483 EDKNIKTSRAND 518
D+ + D
Sbjct: 120 TDETLIEEELTD 131
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 777,146
Number of Sequences: 2352
Number of extensions: 16517
Number of successful extensions: 85
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 85
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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