Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_B09
         (771 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    31   0.009
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    31   0.009
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    30   0.021
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    30   0.027
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    27   0.26 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   2.4  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   5.5  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    21   9.6  
EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholi...    21   9.6  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   9.6  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 31.5 bits (68), Expect = 0.009
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = +3

Query: 531 CHDCGELFKSKCKLRVHWKRAHQSSYLKCERCKRQFKSFKAYNLHKKI 674
           C+ CG+ F    +L  H++        +CE C + F   +  ++H++I
Sbjct: 94  CNICGKTFAVPARLTRHYRTHTGEKPYQCEYCSKSFSVKENLSVHRRI 141



 Score = 31.5 bits (68), Expect = 0.009
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
 Frame = +3

Query: 528 ECHDCGELFKSKCKLRVHWKRAHQSSYLKCERCKRQFKSFKAYNLHKKI----SPAXCTV 695
           +C  C + F  K  L VH +   +    KC+ C+R F+     + H +I     P  CTV
Sbjct: 121 QCEYCSKSFSVKENLSVHRRIHTKERPYKCDVCERAFEHSGKLHRHMRIHTGERPHKCTV 180

Query: 696 AKFIXIE 716
                I+
Sbjct: 181 CSKTFIQ 187



 Score = 29.5 bits (63), Expect = 0.036
 Identities = 15/47 (31%), Positives = 19/47 (40%)
 Frame = +3

Query: 531 CHDCGELFKSKCKLRVHWKRAHQSSYLKCERCKRQFKSFKAYNLHKK 671
           C  CG+ F     L++H    +     KC  C   F S K   LH K
Sbjct: 234 CDICGKSFGYNHVLKLHQVAHYGEKVYKCTLCHETFGSKKTMELHIK 280



 Score = 25.4 bits (53), Expect = 0.59
 Identities = 12/46 (26%), Positives = 19/46 (41%)
 Frame = +3

Query: 531 CHDCGELFKSKCKLRVHWKRAHQSSYLKCERCKRQFKSFKAYNLHK 668
           C  CG+ F    +L+VH +         C+ C + F       LH+
Sbjct: 206 CKACGKGFTCSKQLKVHTRTHTGEKPYTCDICGKSFGYNHVLKLHQ 251


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 31.5 bits (68), Expect = 0.009
 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
 Frame = +3

Query: 531 CHDCGELFKSKCKLRVHWKRAHQ--SSYLKCERCKRQFKSFKAYNLHKKI 674
           C  C ++  S  +LR H +  H   S    C  CKR + S  +   HK I
Sbjct: 5   CEPCNKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLNSLRNHKSI 54


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 30.3 bits (65), Expect = 0.021
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = +3

Query: 507 RANDLSLECHDCGELFKSKCKLRVHWKRAHQSSYLKCERCKRQF 638
           R + L  +CH CG+ F     L+ H +         C+ C R F
Sbjct: 37  RTHTLPCKCHLCGKAFSRPWLLQGHIRTHTGEKPFSCQHCNRAF 80


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 29.9 bits (64), Expect = 0.027
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = +3

Query: 528 ECHDCGELFKSKCKLRVHWKRAHQSS--YLKCERCKRQFKSFKAYNLHKKI 674
           EC  C   F     L+ H++  H+ S     CE C R++++  +   HK +
Sbjct: 7   ECPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKSL 57


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 26.6 bits (56), Expect = 0.26
 Identities = 12/49 (24%), Positives = 18/49 (36%)
 Frame = +3

Query: 528 ECHDCGELFKSKCKLRVHWKRAHQSSYLKCERCKRQFKSFKAYNLHKKI 674
           EC +C + F     L+ H +         C  C RQF        H ++
Sbjct: 11  ECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRV 59


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +3

Query: 615 CERCKRQFKSFKAYNLHKKISPAXCTVAKFIXIEGEGKNRMFYCK 749
           CE CK  F+     ++ +KI    CT  +   I    +NR  YC+
Sbjct: 84  CEGCKGFFRR----SIQQKIQYRPCTKNQQCSILRINRNRCQYCR 124


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +3

Query: 129 SFKV-CRVCLGCYPSDDCLSLFHVENGRAISDL 224
           SF V C V LG Y    C +  HV++ RA++ L
Sbjct: 200 SFYVPCIVMLGIYCRLYCYAQKHVKSIRAVTKL 232


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 11/37 (29%), Positives = 14/37 (37%)
 Frame = +3

Query: 561 KCKLRVHWKRAHQSSYLKCERCKRQFKSFKAYNLHKK 671
           K  L  H +    S   KCE+C     +    N H K
Sbjct: 1   KHHLEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSHLK 37


>EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 6 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 549 LFKSKCKLRVHW 584
           +FKS CK+ V W
Sbjct: 106 IFKSTCKMDVAW 117


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 462 HCFHETMYQIHSY 424
           HCF+ T YQI  +
Sbjct: 608 HCFNCTQYQIRDH 620


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,211
Number of Sequences: 438
Number of extensions: 4448
Number of successful extensions: 22
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)