Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_B07
(638 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13166| Best HMM Match : Ank (HMM E-Value=2.9e-05) 33 0.15
SB_22757| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_25457| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-08) 29 2.4
SB_3046| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_55670| Best HMM Match : zf-C2H2 (HMM E-Value=1.6e-29) 29 4.2
SB_19575| Best HMM Match : MbeB_N (HMM E-Value=1.7) 29 4.2
SB_490| Best HMM Match : C1_1 (HMM E-Value=1.3) 29 4.2
SB_9903| Best HMM Match : Lipase_GDSL (HMM E-Value=0.0051) 28 5.6
SB_12387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_7742| Best HMM Match : HEAT (HMM E-Value=9e-23) 27 9.7
>SB_13166| Best HMM Match : Ank (HMM E-Value=2.9e-05)
Length = 299
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = +2
Query: 20 SVYNVFFX*VTYLLKIYFLLQNKKKSEISILPFSISVGN*ILLRSAQFS*KPVQSFCFTA 199
S+ N F LL+I++L ++ E+ + F +L + S PV+ A
Sbjct: 230 SIQNGFLSTHLLLLRIFYLKSALRRREVEMEVFLSRTLQDLLPSQVRISLLPVEGLGDNA 289
Query: 200 IIQLSCDFHR 229
+I +SC FH+
Sbjct: 290 VIMISCHFHK 299
>SB_22757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1172
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +1
Query: 199 NHSIILRFSSNIPFLLFSKQN*YYGFSKW-QTRNFTQATR 315
NH +++R S++P +FSK+N Y +W Q R+ +Q TR
Sbjct: 1064 NHLLLMRAGSSLPPGVFSKEN-VYSRRRWKQRRSKSQRTR 1102
>SB_25457| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-08)
Length = 369
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/54 (25%), Positives = 31/54 (57%)
Frame = +1
Query: 199 NHSIILRFSSNIPFLLFSKQN*YYGFSKWQTRNFTQATRFTANN*KLSARQWRF 360
NH +++R S++P +FSK+N Y +W+ + ++ + N + A +W++
Sbjct: 115 NHLLLMRAGSSLPPGVFSKEN-VYSRRRWKQVQYLPSSGGPSRNAR-DATKWKY 166
>SB_3046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 734
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 442 TTRIGISYFSASQHQQRGSAN*FCPCFTPYT 534
TT I Y S SQH Q+ S +C C T T
Sbjct: 471 TTAIACCYASVSQHLQQPSLAAYCRCITILT 501
>SB_55670| Best HMM Match : zf-C2H2 (HMM E-Value=1.6e-29)
Length = 637
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 263 STMDSVSGKQETSHKPQDSLQITESCQPDSGDFVMP 370
ST +S S +SH P + Q + +P S D++ P
Sbjct: 227 STQESYSSNSTSSHYPYSTGQNSRPARPSSHDYIYP 262
>SB_19575| Best HMM Match : MbeB_N (HMM E-Value=1.7)
Length = 220
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +3
Query: 372 LCWSL*RRELTSKSWIENSKLYTHYQNWNLLLLSIPA 482
LC SL ELT S ENS + T +QNW L L+ A
Sbjct: 103 LCASLSALELTMSS-NENSDIDTDWQNWKDLFLAAVA 138
>SB_490| Best HMM Match : C1_1 (HMM E-Value=1.3)
Length = 256
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/74 (27%), Positives = 30/74 (40%)
Frame = +2
Query: 263 STMDSVSGKQETSHKPQDSLQITESCQPDSGDFVMPSVLELVEERAHLQELDRELQALHT 442
ST+D S + I S +SGD + PS +E ++ H ++ +H
Sbjct: 83 STIDESGDVIHPSTIDESGDVIHPSTIEESGDVIHPSTIEESDDVIHPSTIEESGDVIHP 142
Query: 443 LPELESPTSQHPST 484
ES HPST
Sbjct: 143 STIEESGDVIHPST 156
>SB_9903| Best HMM Match : Lipase_GDSL (HMM E-Value=0.0051)
Length = 891
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +2
Query: 332 ESCQPDSGDFVMPSVLELVEERAHLQELDRELQ-ALHTLPELESP--TSQHPSTNKGDQR 502
E C ++ + +L+ + + +D Q A H LE+P TS HPST + + R
Sbjct: 229 EVCSQETSESHRIEILDQSRQSGQREAIDINRQYASHRNSRLETPRDTSSHPSTQQRENR 288
Query: 503 IN 508
N
Sbjct: 289 PN 290
>SB_12387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1096
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 115 LLYKCGKLNTPPXRAIFVKTGTKFL 189
+++KC PP RA++ KTG K+L
Sbjct: 214 VIWKCLHWRKPPSRALWDKTGDKWL 238
>SB_7742| Best HMM Match : HEAT (HMM E-Value=9e-23)
Length = 940
Score = 27.5 bits (58), Expect = 9.7
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Frame = +2
Query: 197 AIIQLSCDF----HRTFHSFSFPNKISTMDSVSGKQETSHKPQDSLQITESCQPDSGDFV 364
A+ Q+S DF R FH P + +D ++ + +H + E C +
Sbjct: 480 AVGQMSTDFANAFQRKFHMKVIPGLLHVLDDLANPRVQAHAGAALVNFCEDCPKSTLHPY 539
Query: 365 MPSVLELVEE--RAHLQEL 415
+ S+L +E A LQEL
Sbjct: 540 LDSILAKLEAVLSAKLQEL 558
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,576,652
Number of Sequences: 59808
Number of extensions: 394222
Number of successful extensions: 989
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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