Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_B07
         (638 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    26   0.88 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    26   1.2  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    24   4.7  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   6.2  
DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.       23   8.2  
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        23   8.2  

>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 26.2 bits (55), Expect = 0.88
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -1

Query: 488 CWCWDAEK 465
           CWCWD EK
Sbjct: 522 CWCWDLEK 529


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 293 ETSHKPQDSLQITESCQPDSG 355
           ET+HK Q    +T+ C  D+G
Sbjct: 687 ETNHKGQRDFDLTQDCTDDAG 707


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 422 ELQALHTLPELES 460
           E Q LHTLP++ES
Sbjct: 185 ETQPLHTLPDIES 197


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +3

Query: 420 ENSKLYTHYQNWNLLLLSIPAPTKGISELILSML 521
           E  KLY +Y+    +     A +KG  ELILS L
Sbjct: 695 EYVKLYVNYRFMRGIEQQFLALSKGFGELILSHL 728


>DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.
          Length = 383

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 186 FASLQSFNYPAIFIEHS 236
           +AS   FNYP  F EH+
Sbjct: 123 YASGPDFNYPPEFYEHT 139


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +2

Query: 371 SVLELVEERAHLQELDRELQALHTLPELESPTSQHPSTNK 490
           +V E   E    QE++ E+  L  LP+  +    HPS  K
Sbjct: 35  TVREKSVELHERQEIEHEILELLGLPDRPNKQHVHPSLRK 74


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 681,041
Number of Sequences: 2352
Number of extensions: 14622
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)