Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_B06
(824 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT015283-1|AAT94512.1| 341|Drosophila melanogaster GH23746p pro... 34 0.21
BT011473-1|AAR99131.1| 319|Drosophila melanogaster RE15288p pro... 34 0.21
AY051915-1|AAK93339.1| 270|Drosophila melanogaster LD40324p pro... 34 0.21
AE014296-2544|AAN11776.1| 317|Drosophila melanogaster CG7656-PA... 34 0.21
AE014296-2543|AAN11777.2| 269|Drosophila melanogaster CG7656-PB... 34 0.21
AE014296-2542|AAF49611.1| 341|Drosophila melanogaster CG7656-PC... 34 0.21
BT004478-1|AAO42642.1| 376|Drosophila melanogaster LP02252p pro... 33 0.36
AE014296-208|AAN11466.1| 376|Drosophila melanogaster CG9134-PB,... 33 0.36
AY069067-1|AAL39212.1| 604|Drosophila melanogaster GH08407p pro... 32 0.83
AE014297-2504|AAF55540.2| 604|Drosophila melanogaster CG7669-PA... 32 0.83
AY058771-1|AAL14000.1| 885|Drosophila melanogaster SD05329p pro... 31 1.4
AE014296-3638|AAF51794.1| 885|Drosophila melanogaster CG7143-PA... 31 1.4
AB049433-1|BAB15799.1| 885|Drosophila melanogaster dpol-eta pro... 31 1.4
AB036766-1|BAB20905.1| 885|Drosophila melanogaster DNA polymera... 31 1.4
M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein ( D.me... 29 7.7
AY089555-1|AAL90293.1| 1429|Drosophila melanogaster LD43558p pro... 29 7.7
AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA... 29 7.7
>BT015283-1|AAT94512.1| 341|Drosophila melanogaster GH23746p
protein.
Length = 341
Score = 34.3 bits (75), Expect = 0.21
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Frame = +2
Query: 326 RDLEFQELARQNKITKQILEAFLQKKLGVKSNAVRPPSVLD--ILPVKMHTKESTLEQSN 499
RD + ++ N I KQ L A + K + V P ++ D + P + T ES L+ +
Sbjct: 206 RDSQGKDNEYPNIIRKQALAANAEAK---REGIVVPMTLEDYCLKPTRKPTTESGLDANF 262
Query: 500 NEEDF----QEDLQETQDYVEDDNLQSVESEQIDS 592
++DF ++DL D+ EDD+ E E DS
Sbjct: 263 YDDDFDLETEDDLPSDDDFDEDDDDDEDEDEDEDS 297
>BT011473-1|AAR99131.1| 319|Drosophila melanogaster RE15288p
protein.
Length = 319
Score = 34.3 bits (75), Expect = 0.21
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Frame = +2
Query: 326 RDLEFQELARQNKITKQILEAFLQKKLGVKSNAVRPPSVLD--ILPVKMHTKESTLEQSN 499
RD + ++ N I KQ L A + K + V P ++ D + P + T ES L+ +
Sbjct: 184 RDSQGKDNEYPNIIRKQALAANAEAK---REGIVVPMTLEDYCLKPTRKPTTESGLDANF 240
Query: 500 NEEDF----QEDLQETQDYVEDDNLQSVESEQIDS 592
++DF ++DL D+ EDD+ E E DS
Sbjct: 241 YDDDFDLETEDDLPSDDDFDEDDDDDEDEDEDEDS 275
>AY051915-1|AAK93339.1| 270|Drosophila melanogaster LD40324p
protein.
Length = 270
Score = 34.3 bits (75), Expect = 0.21
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Frame = +2
Query: 287 FLLANAQRTSNNNRDLEFQELARQNKITKQILEAFLQKKLGVKSNAVRPPSVLD--ILPV 460
F AN + R + Q+ N I KQ L A + K + V P ++ D + P
Sbjct: 122 FSPANVDASVMYRRWRDSQDNEYPNIIRKQALAANAEAK---REGIVVPMTLEDYCLKPT 178
Query: 461 KMHTKESTLEQSNNEEDF----QEDLQETQDYVEDDNLQSVESEQIDS 592
+ T ES L+ + ++DF ++DL D+ EDD+ E E DS
Sbjct: 179 RKPTTESGLDANFYDDDFDLETEDDLPSDDDFDEDDDDDEDEDEDEDS 226
>AE014296-2544|AAN11776.1| 317|Drosophila melanogaster CG7656-PA,
isoform A protein.
Length = 317
Score = 34.3 bits (75), Expect = 0.21
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Frame = +2
Query: 287 FLLANAQRTSNNNRDLEFQELARQNKITKQILEAFLQKKLGVKSNAVRPPSVLD--ILPV 460
F AN + R + Q+ N I KQ L A + K + V P ++ D + P
Sbjct: 169 FSPANVDASVMYRRWRDSQDNEYPNIIRKQALAANAEAK---REGIVVPMTLEDYCLKPT 225
Query: 461 KMHTKESTLEQSNNEEDF----QEDLQETQDYVEDDNLQSVESEQIDS 592
+ T ES L+ + ++DF ++DL D+ EDD+ E E DS
Sbjct: 226 RKPTTESGLDANFYDDDFDLETEDDLPSDDDFDEDDDDDEDEDEDEDS 273
>AE014296-2543|AAN11777.2| 269|Drosophila melanogaster CG7656-PB,
isoform B protein.
Length = 269
Score = 34.3 bits (75), Expect = 0.21
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Frame = +2
Query: 287 FLLANAQRTSNNNRDLEFQELARQNKITKQILEAFLQKKLGVKSNAVRPPSVLD--ILPV 460
F AN + R + Q+ N I KQ L A + K + V P ++ D + P
Sbjct: 121 FSPANVDASVMYRRWRDSQDNEYPNIIRKQALAANAEAK---REGIVVPMTLEDYCLKPT 177
Query: 461 KMHTKESTLEQSNNEEDF----QEDLQETQDYVEDDNLQSVESEQIDS 592
+ T ES L+ + ++DF ++DL D+ EDD+ E E DS
Sbjct: 178 RKPTTESGLDANFYDDDFDLETEDDLPSDDDFDEDDDDDEDEDEDEDS 225
>AE014296-2542|AAF49611.1| 341|Drosophila melanogaster CG7656-PC,
isoform C protein.
Length = 341
Score = 34.3 bits (75), Expect = 0.21
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Frame = +2
Query: 326 RDLEFQELARQNKITKQILEAFLQKKLGVKSNAVRPPSVLD--ILPVKMHTKESTLEQSN 499
RD + ++ N I KQ L A + K + V P ++ D + P + T ES L+ +
Sbjct: 206 RDSQGKDNEYPNIIRKQALAANAEAK---REGIVVPMTLEDYCLKPTRKPTTESGLDANF 262
Query: 500 NEEDF----QEDLQETQDYVEDDNLQSVESEQIDS 592
++DF ++DL D+ EDD+ E E DS
Sbjct: 263 YDDDFDLETEDDLPSDDDFDEDDDDDEDEDEDEDS 297
>BT004478-1|AAO42642.1| 376|Drosophila melanogaster LP02252p
protein.
Length = 376
Score = 33.5 bits (73), Expect = 0.36
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Frame = +2
Query: 461 KMHTKESTLEQSNNEEDFQEDL--QETQDYVEDDNLQSVESEQIDSFLDSI 607
++ ++ E+++++E Q+ L QE DY ++LQSVESEQ D + +I
Sbjct: 160 RLREEQEEEEEADDQERDQQPLANQEDFDYDVQESLQSVESEQHDQYYGNI 210
>AE014296-208|AAN11466.1| 376|Drosophila melanogaster CG9134-PB,
isoform B protein.
Length = 376
Score = 33.5 bits (73), Expect = 0.36
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Frame = +2
Query: 461 KMHTKESTLEQSNNEEDFQEDL--QETQDYVEDDNLQSVESEQIDSFLDSI 607
++ ++ E+++++E Q+ L QE DY ++LQSVESEQ D + +I
Sbjct: 160 RLREEQEEEEEADDQERDQQPLANQEDFDYDVQESLQSVESEQHDQYYGNI 210
>AY069067-1|AAL39212.1| 604|Drosophila melanogaster GH08407p
protein.
Length = 604
Score = 32.3 bits (70), Expect = 0.83
Identities = 14/60 (23%), Positives = 33/60 (55%)
Frame = +2
Query: 434 PSVLDILPVKMHTKESTLEQSNNEEDFQEDLQETQDYVEDDNLQSVESEQIDSFLDSIEG 613
PSV ++P H++ +++ +E+D + D + D ++++ + E E+I+ + I G
Sbjct: 118 PSVRTLMPGSAHSRVKDEDEAEDEDDDEGDGENDNDNEDENDDEDAEVEEIEEEEEEIPG 177
>AE014297-2504|AAF55540.2| 604|Drosophila melanogaster CG7669-PA
protein.
Length = 604
Score = 32.3 bits (70), Expect = 0.83
Identities = 14/60 (23%), Positives = 33/60 (55%)
Frame = +2
Query: 434 PSVLDILPVKMHTKESTLEQSNNEEDFQEDLQETQDYVEDDNLQSVESEQIDSFLDSIEG 613
PSV ++P H++ +++ +E+D + D + D ++++ + E E+I+ + I G
Sbjct: 118 PSVRTLMPGSAHSRVKDEDEAEDEDDDEGDGENDNDNEDENDDEDAEVEEIEEEEEEIPG 177
>AY058771-1|AAL14000.1| 885|Drosophila melanogaster SD05329p
protein.
Length = 885
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/66 (24%), Positives = 32/66 (48%)
Frame = +2
Query: 395 QKKLGVKSNAVRPPSVLDILPVKMHTKESTLEQSNNEEDFQEDLQETQDYVEDDNLQSVE 574
QKK G + + LD+ + +E +++N +DF+ED +E + D ++ E
Sbjct: 572 QKKTGQQGSVTSREDSLDVQEL---AEELDAIEADNSKDFEEDTEEETELTSDTHMSKPE 628
Query: 575 SEQIDS 592
+ D+
Sbjct: 629 GQSSDA 634
>AE014296-3638|AAF51794.1| 885|Drosophila melanogaster CG7143-PA
protein.
Length = 885
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/66 (24%), Positives = 32/66 (48%)
Frame = +2
Query: 395 QKKLGVKSNAVRPPSVLDILPVKMHTKESTLEQSNNEEDFQEDLQETQDYVEDDNLQSVE 574
QKK G + + LD+ + +E +++N +DF+ED +E + D ++ E
Sbjct: 572 QKKTGQQGSVTSREDSLDVQEL---AEELDAIEADNSKDFEEDTEEETELTSDTHMSKPE 628
Query: 575 SEQIDS 592
+ D+
Sbjct: 629 GQSSDA 634
>AB049433-1|BAB15799.1| 885|Drosophila melanogaster dpol-eta
protein.
Length = 885
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/66 (24%), Positives = 32/66 (48%)
Frame = +2
Query: 395 QKKLGVKSNAVRPPSVLDILPVKMHTKESTLEQSNNEEDFQEDLQETQDYVEDDNLQSVE 574
QKK G + + LD+ + +E +++N +DF+ED +E + D ++ E
Sbjct: 572 QKKTGQQGSVTSREDSLDVQEL---AEELDAIEADNSKDFEEDTEEETELTSDTHMSKPE 628
Query: 575 SEQIDS 592
+ D+
Sbjct: 629 GQSSDA 634
>AB036766-1|BAB20905.1| 885|Drosophila melanogaster DNA polymerase
eta protein.
Length = 885
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/66 (24%), Positives = 32/66 (48%)
Frame = +2
Query: 395 QKKLGVKSNAVRPPSVLDILPVKMHTKESTLEQSNNEEDFQEDLQETQDYVEDDNLQSVE 574
QKK G + + LD+ + +E +++N +DF+ED +E + D ++ E
Sbjct: 572 QKKTGQQGSVTSREDSLDVQEL---AEELDAIEADNSKDFEEDTEEETELTSDTHMSKPE 628
Query: 575 SEQIDS 592
+ D+
Sbjct: 629 GQSSDA 634
>M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein (
D.melanogaster RpII215gene encoding RNA polymerase II,
largest subunit, completecds. ).
Length = 1896
Score = 29.1 bits (62), Expect = 7.7
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 497 NNEEDFQEDLQETQDYVEDDN-LQSVESEQI-DSFLDSIEGMYSIY 628
NNEE+ +D E D +EDD L+ +E+ + D L IE + +Y
Sbjct: 1255 NNEENKFQDEDEAVDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVY 1300
>AY089555-1|AAL90293.1| 1429|Drosophila melanogaster LD43558p
protein.
Length = 1429
Score = 29.1 bits (62), Expect = 7.7
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 497 NNEEDFQEDLQETQDYVEDDN-LQSVESEQI-DSFLDSIEGMYSIY 628
NNEE+ +D E D +EDD L+ +E+ + D L IE + +Y
Sbjct: 797 NNEENKFQDEDEAVDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVY 842
>AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA
protein.
Length = 1887
Score = 29.1 bits (62), Expect = 7.7
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 497 NNEEDFQEDLQETQDYVEDDN-LQSVESEQI-DSFLDSIEGMYSIY 628
NNEE+ +D E D +EDD L+ +E+ + D L IE + +Y
Sbjct: 1255 NNEENKFQDEDEAVDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVY 1300
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,801,165
Number of Sequences: 53049
Number of extensions: 498198
Number of successful extensions: 1903
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1878
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3901127880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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