Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_B05
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    24   1.4  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   1.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.4  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   7.4  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   9.8  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +3

Query: 168 SGEDWTPDADSNEPASRTGRKRVSKAPVNNTK 263
           SG+   P +DS     RTG KR       +T+
Sbjct: 22  SGQQHGPQSDSRNQQLRTGEKRKRSTSSQSTE 53


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -3

Query: 525 STSSVHQVLILQYLHP 478
           S SS H VLI Q LHP
Sbjct: 56  SPSSAHTVLIPQPLHP 71


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 552 SVIMLCHQFSTSSVHQ 505
           +VI+ CH  S   VHQ
Sbjct: 170 NVILACHMLSFLMVHQ 185


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -3

Query: 552 SVIMLCHQFSTSSVHQVLILQYLHPILH 469
           +++  CH  S SS HQ ++  + +P+ H
Sbjct: 329 AMVNRCHPLSLSSDHQAML--HHNPMSH 354


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/26 (23%), Positives = 13/26 (50%)
 Frame = +1

Query: 526 KLMAKHYYRNLSQWNQMEEFYTNVHV 603
           + M  H++  L  W+Q+   +  + V
Sbjct: 85  RFMKYHFFGTLKLWSQLFSTFAGIEV 110


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,348
Number of Sequences: 336
Number of extensions: 3175
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)