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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_B03
         (634 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo...    64   2e-11
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom...    60   2e-10
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch...    55   1e-08
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom...    52   5e-08
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom...    52   5e-08
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos...    52   7e-08
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom...    51   2e-07
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p...    51   2e-07
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ...    50   3e-07
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar...    48   9e-07
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2...    48   9e-07
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc...    47   2e-06
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha...    46   3e-06
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces...    46   6e-06
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz...    45   1e-05
SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr 3...    42   6e-05
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc...    35   0.008
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ...    33   0.034
SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces pom...    31   0.10 
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce...    31   0.18 
SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces pomb...    29   0.74 
SPAC926.05c |||diphthamide biosynthesis protein Dph4 |Schizosacc...    27   2.3  
SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomy...    27   3.0  
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||...    26   5.2  
SPAC664.09 |ggt1||gamma-glutamyltranspeptidase Ggt1 |Schizosacch...    25   6.9  
SPCP31B10.05 |||tyrosyl-DNA phosphodiesterase |Schizosaccharomyc...    25   9.1  
SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces pombe...    25   9.1  
SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharo...    25   9.1  
SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15 |Schizo...    25   9.1  

>SPBC1773.09c |mug184||meiotically upregulated gene
           Mug184|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 551

 Score = 64.1 bits (149), Expect = 2e-11
 Identities = 29/62 (46%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
 Frame = +2

Query: 5   ALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMK-FQKLKEAKEILCDPSKRALY 181
           A+L   +N+T +QI  +Y  LALQ+HPD+N G++E  +K FQ+L+ A E+L D +KR +Y
Sbjct: 15  AILKLQKNATFQQIRKQYLFLALQYHPDRNPGDEERAVKRFQRLQLAHEVLSDATKRLIY 74

Query: 182 DK 187
           D+
Sbjct: 75  DQ 76


>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 381

 Score = 60.5 bits (140), Expect = 2e-10
 Identities = 25/66 (37%), Positives = 42/66 (63%)
 Frame = +2

Query: 8   LLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRALYDK 187
           +LG  ++++  +I   Y+ L  Q HPDKN G +EA+ KF ++ +A E+L DP +R +YD 
Sbjct: 11  ILGVSKDASESEIRKAYRQLTKQWHPDKNPGNEEAQEKFIEINKAHEVLSDPEQRKIYDA 70

Query: 188 WRRSGI 205
           +   G+
Sbjct: 71  YGEEGL 76


>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
           family|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 476

 Score = 54.8 bits (126), Expect = 1e-08
 Identities = 26/59 (44%), Positives = 37/59 (62%)
 Frame = +2

Query: 8   LLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRALYD 184
           +LG  + +T  +I   Y+ LAL +HPDKN G  EAE +F+++ EA  IL DP  R  +D
Sbjct: 353 ILGVSKEATDIEIKKAYRKLALVYHPDKNAGNLEAEARFKEVGEAYTILSDPESRRRFD 411


>SPCC63.03 |||DNAJ domain protein, DNAJC11
           family|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 642

 Score = 52.4 bits (120), Expect = 5e-08
 Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
 Frame = +2

Query: 11  LGCDENSTVEQITAEYKILALQHHPDKNDGEKEA--EMKFQKLKEAKEILCDPSKRALYD 184
           LG  +++T +QI   Y  L+   HPD++  +++A  E KFQ ++ A E+L DPSK+ +YD
Sbjct: 13  LGLPKDATSDQIKESYYRLSRLFHPDRHTADQKAAAEEKFQIIQHAYEVLSDPSKKEIYD 72

Query: 185 KWRRSGI 205
            +   G+
Sbjct: 73  NFGEQGL 79


>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
           type|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 392

 Score = 52.4 bits (120), Expect = 5e-08
 Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
 Frame = +2

Query: 8   LLGCDENSTVEQITAEYKILALQHHPDKN-DGEKEAEMKFQKLKEAKEILCDPSKRALYD 184
           LLG   ++T   I   Y+ LA+++HPDKN D  + A  KFQK+ EA ++L D   R+ YD
Sbjct: 12  LLGISTDATAVDIKKAYRKLAVKYHPDKNPDDPQGASEKFQKISEAYQVLGDEKLRSQYD 71

Query: 185 KW 190
           ++
Sbjct: 72  QF 73


>SPBC11B10.05c |rsp1||random septum position protein
           Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 494

 Score = 52.0 bits (119), Expect = 7e-08
 Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
 Frame = +2

Query: 8   LLGCDENSTVEQITAEYKILALQHHPDKNDG-EKEAEMKFQKLKEAKEILCDPSKRALYD 184
           +LG +  S+  +I  +Y  L L++HPD+N G E E   +FQ +++A E+L DP  R L+D
Sbjct: 16  ILGAESTSSYVEIRQQYLKLVLRYHPDRNPGREAEVLPQFQLIQKAHEVLKDPKLRELFD 75

Query: 185 KWR 193
           + R
Sbjct: 76  QRR 78


>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 407

 Score = 50.8 bits (116), Expect = 2e-07
 Identities = 25/69 (36%), Positives = 40/69 (57%)
 Frame = +2

Query: 8   LLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRALYDK 187
           +L  D  ++  ++   Y+ LAL++HPDKN    +   KF+++  A EIL D  KRA YD+
Sbjct: 10  VLNVDVTASQAELKKAYRKLALKYHPDKNPNAGD---KFKEISRAYEILADEEKRATYDR 66

Query: 188 WRRSGIAMG 214
           +   G+  G
Sbjct: 67  FGEEGLQGG 75


>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 355

 Score = 50.8 bits (116), Expect = 2e-07
 Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
 Frame = +2

Query: 8   LLGCDENSTVEQITAEYKILALQHHPDKN-DGEKEAEMKFQKLKEAKEILCDPSKRALYD 184
           +L    ++  + I   Y+ LA+ +HPDKN +  + A  KFQKL EA ++L DP  R  YD
Sbjct: 13  ILNISVDADGDTIKKSYRRLAILYHPDKNRENPEAAREKFQKLAEAYQVLSDPKLREKYD 72

Query: 185 KWRRSG 202
           K  + G
Sbjct: 73  KLGKVG 78


>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 528

 Score = 50.0 bits (114), Expect = 3e-07
 Identities = 23/60 (38%), Positives = 39/60 (65%)
 Frame = +2

Query: 11  LGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRALYDKW 190
           LG  ++++  +I + Y  LA Q+HPD N  +K A+ KF ++K+A E+L DP K+  +D +
Sbjct: 91  LGVSKSASASEIKSAYYKLAKQYHPDANP-DKAAQDKFVEIKQAYEVLQDPKKKKAFDTY 149


>SPAC1071.09c |||DNAJ domain protein, DNAJC9
           family|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 282

 Score = 48.4 bits (110), Expect = 9e-07
 Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 8/83 (9%)
 Frame = +2

Query: 5   ALLGCDENSTVEQITAEYKILALQHHPDK-NDGEK--EAEMKFQKLKEAKEILCDPSKRA 175
           ++LG +++++ E I   Y+  ALQHHPD+ +D EK  EA ++F K+  A  +L D  +R 
Sbjct: 34  SVLGVEKDASDELIRRAYRKKALQHHPDRIHDEEKKVEARIEFDKVAIAYGVLSDKKRRK 93

Query: 176 LYDKWRR-----SGIAMGFKQWL 229
            YDK  +     + I   +K+WL
Sbjct: 94  HYDKTGQLRETDADIDFDWKEWL 116


>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 413

 Score = 48.4 bits (110), Expect = 9e-07
 Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
 Frame = +2

Query: 29  STVEQITAEYKILALQHHPDKN--DGEKEAEMKFQKLKEAKEILCDPSKRALYDKW 190
           ++ E+I   YK LAL HHPDK     ++EA  +F+ ++EA +IL DP  R +YD +
Sbjct: 17  ASAEEIKKSYKRLALLHHPDKAPIHEKEEAAERFRGVQEAYDILKDPESREMYDMY 72


>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 379

 Score = 47.2 bits (107), Expect = 2e-06
 Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
 Frame = +2

Query: 41  QITAEYKILALQHHPDKN-DGEKEAEMKFQKLKEAKEILCDPSKRALYDKW 190
           ++   Y+ LAL++HPDKN +GEK    KF+++  A E+L DP +R LYD++
Sbjct: 21  ELKKAYRKLALKYHPDKNPNGEK----KFKEISLAYEVLSDPQRRKLYDQY 67


>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
           family|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 380

 Score = 46.4 bits (105), Expect = 3e-06
 Identities = 21/60 (35%), Positives = 37/60 (61%)
 Frame = +2

Query: 8   LLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRALYDK 187
           +L  + +S +++I A Y+ LALQ+HPD+N G ++    F ++  A  IL +  KR  ++K
Sbjct: 13  ILQVNHDSDLQEIKANYRKLALQYHPDRNPGIEDYNEIFSQINAAYNILSNDDKRKWHEK 72


>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 403

 Score = 45.6 bits (103), Expect = 6e-06
 Identities = 24/60 (40%), Positives = 35/60 (58%)
 Frame = +2

Query: 8   LLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRALYDK 187
           +L   +  T  +I   YK LALQ HPDKN     A+  F+ + +A ++L DP+ RA YD+
Sbjct: 117 ILDLKKTCTDTEIKKSYKKLALQLHPDKNHA-PSADEAFKMVSKAFQVLSDPNLRAHYDR 175


>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
           Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 289

 Score = 44.8 bits (101), Expect = 1e-05
 Identities = 23/67 (34%), Positives = 38/67 (56%)
 Frame = +2

Query: 8   LLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRALYDK 187
           LLG +E++  ++I   ++  +L++HPDKN  + +A  KF  L+ A   L D   R  YD 
Sbjct: 13  LLGINEDAQDQEIHRAWRKTSLKYHPDKNPNDPKAAEKFHMLQLAYNALIDVQLRKAYDS 72

Query: 188 WRRSGIA 208
            R + +A
Sbjct: 73  ERFAKLA 79


>SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 208

 Score = 42.3 bits (95), Expect = 6e-05
 Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
 Frame = +2

Query: 5   ALLGCDENSTVEQITAEYKILALQHHPDK--NDGEKEAEMKFQKLKEAKEILCDPSKRAL 178
           A+L     ++ E+I   YK  AL+ HPD+        A  +FQ + EA  +L D S+RA 
Sbjct: 7   AILNITPKASAEEIKYAYKKAALETHPDRVSPSARARATEQFQLVNEAYYVLSDNSRRAQ 66

Query: 179 YDKWRRSGIA 208
           YD+   S  A
Sbjct: 67  YDRESASSSA 76


>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 442

 Score = 35.1 bits (77), Expect = 0.008
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +2

Query: 38  EQITAEYKILALQHHPDKN--DGEKEAEMKFQKLKEAKEILCDPSKRALYD 184
           EQI   +    L+HHPDK    G    +  F+ +++A EIL DP +R  +D
Sbjct: 114 EQIKKAHLKKVLKHHPDKKAASGNINDDSFFKCIQKAYEILSDPVRRRQFD 164


>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
           Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 611

 Score = 33.1 bits (72), Expect = 0.034
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
 Frame = +2

Query: 8   LLGCDENSTVEQITAEYKILALQHHPDK-----NDGEKEAEMKFQKLKEAKEILCDPSKR 172
           +LG  + ++V+ +   YK L+++ HPDK     N   +E E  + ++  A   L D   R
Sbjct: 102 ILGIAKGTSVDDVRRHYKRLSIKFHPDKVRNMVNTTREEVEKHYIEITNAYRALTDDKTR 161

Query: 173 ALY 181
             Y
Sbjct: 162 ENY 164


>SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 303

 Score = 31.5 bits (68), Expect = 0.10
 Identities = 21/75 (28%), Positives = 36/75 (48%)
 Frame = +2

Query: 8   LLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRALYDK 187
           LL     +++++I   Y+  ++ +HPDKN   KE    +  L     IL +   R  YD 
Sbjct: 44  LLEVPTKASIKEINRAYRKKSILYHPDKNPKSKEL---YTLLGLIVNILRNTETRKRYDY 100

Query: 188 WRRSGIAMGFKQWLG 232
           + ++    GF +W G
Sbjct: 101 FLKN----GFPRWKG 111


>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 1008

 Score = 30.7 bits (66), Expect = 0.18
 Identities = 12/48 (25%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = +2

Query: 152 LCDPSKRALYDKWRRSGIAMGFKQW--LGMKDHVQQSMHWSKPNTKDR 289
           LC   +  + +KWR+ G  +G  +W   G +++V+    + +P+  +R
Sbjct: 840 LCKSRRLGILEKWRKMGSKIGTSEWDLKGGEEYVELMQQYVRPSLTNR 887


>SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 209

 Score = 28.7 bits (61), Expect = 0.74
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +2

Query: 32  TVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRALYD 184
           +V+ I   Y+  +L  HPDKN    +A   F  LK+A+  L +   R   D
Sbjct: 43  SVDDIRNLYRKKSLMIHPDKNRDNPKAADAFDILKKAESDLVNDKIRESLD 93


>SPAC926.05c |||diphthamide biosynthesis protein Dph4
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 139

 Score = 27.1 bits (57), Expect = 2.3
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = +2

Query: 32  TVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRALY 181
           T ++I   Y+   L  HPDK   +        ++KEA ++L     R  Y
Sbjct: 16  TDDEIKEAYRKALLLFHPDKCKEKPSVVYTIDQVKEAYQVLSSEKDRQQY 65


>SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 542

 Score = 26.6 bits (56), Expect = 3.0
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -1

Query: 277 IRLGPVHGLLHMIFHTQPLLEAHSYTTTTPL 185
           I L P H  L+++ +  P L   SYT  T L
Sbjct: 427 ITLAPQHSFLNIVINLNPALALKSYTIITLL 457


>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1158

 Score = 25.8 bits (54), Expect = 5.2
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 249 SSPCTGPSLILRIACWKEMEASRQVHLALAPV 344
           SS C+   L   I+C + +E   ++HL + PV
Sbjct: 379 SSTCSRNRLCYSISCPRRLEQQARLHLKVQPV 410


>SPAC664.09 |ggt1||gamma-glutamyltranspeptidase Ggt1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 630

 Score = 25.4 bits (53), Expect = 6.9
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 240 IMCSSPCTGPSLILRIACWKEMEAS 314
           I C SPC+G +LIL +    +++ S
Sbjct: 334 ITCGSPCSGEALILGLNVLSKVDLS 358


>SPCP31B10.05 |||tyrosyl-DNA phosphodiesterase |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 536

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +2

Query: 83  PDKNDGEKEAEMKFQKLKEAKEILCDPSKRALYDKWRRSGIAM 211
           P K +GE+E+     KLK+  ++L   SK+    K+  S I +
Sbjct: 268 PGKFEGEEESSWGLGKLKKILKMLEKDSKKDEKTKFEESDICI 310


>SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 659

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 14/44 (31%), Positives = 27/44 (61%)
 Frame = -2

Query: 531 KSIIHEKLIMLQLTIILTVVEIYI*IS*LRNLERTSEGGS*LPV 400
           +S   ++L+MLQLT+++ V+ +Y+ +S L     T+   S  P+
Sbjct: 550 ESSFQKRLLMLQLTVLI-VLTVYMAVSRLPENLPTTRSSSNNPI 592


>SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1205

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 32   TVEQITAEYKILALQHHPDKNDGEKEAEMKF 124
            T+E + A Y I  L HHPD +  E E  + F
Sbjct: 972  TMEYV-ATYLIHLLSHHPDISSIESENSLDF 1001


>SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 534

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 552 SKKYLXNLAVTSCHYNCQILLWLFXCL 632
           S+ Y     +   HYNC I +W   C+
Sbjct: 294 SRFYRSPEVILGLHYNCGIDMWSLGCI 320


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,365,161
Number of Sequences: 5004
Number of extensions: 40311
Number of successful extensions: 122
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 112
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 281707720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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