Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_B03
         (634 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ297932-1|CAC35452.1|   90|Anopheles gambiae gSG1a protein prot...    25   2.0  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   2.6  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   6.1  

>AJ297932-1|CAC35452.1|   90|Anopheles gambiae gSG1a protein
          protein.
          Length = 90

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 81 WCCRASILYSAVICS 37
          WCC  S +  AV+CS
Sbjct: 7  WCCLLSFIAMAVLCS 21


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +2

Query: 101 EKEAEMKFQKLKEAKEILCDPSKRALYDKW 190
           +KE E   QK KEA+E L +  KR   +KW
Sbjct: 898 QKELESWIQKEKEAQEKLEEDGKR--MEKW 925


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +2

Query: 77   HHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRALYDKWRR 196
            H+ D N     A+   + ++ +K  +   SK  LY++W R
Sbjct: 1108 HYRDLNANAYLADTIVEAVESSKRAILVLSKSFLYNEWTR 1147


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,554
Number of Sequences: 2352
Number of extensions: 9936
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)