Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_B01
(467 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 32 0.27
SB_17568| Best HMM Match : Ldl_recept_a (HMM E-Value=0.04) 31 0.48
SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016) 31 0.48
SB_3226| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.021) 31 0.63
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 31 0.63
SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.63
SB_41667| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.83
SB_19719| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_28257| Best HMM Match : Gp-FAR-1 (HMM E-Value=3.2) 29 1.5
SB_23562| Best HMM Match : DUF288 (HMM E-Value=1.1) 29 1.5
SB_22224| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_30472| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42) 29 1.9
SB_47491| Best HMM Match : Acyl-CoA_dh_N (HMM E-Value=0.36) 29 2.5
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 29 2.5
SB_21494| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_33744| Best HMM Match : SMC_N (HMM E-Value=0) 28 4.4
SB_3809| Best HMM Match : DUF1014 (HMM E-Value=8.7e-09) 28 4.4
SB_58681| Best HMM Match : MAP65_ASE1 (HMM E-Value=3.3e-26) 28 4.4
SB_45217| Best HMM Match : Linker_histone (HMM E-Value=4.4e-27) 28 4.4
SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022) 27 5.9
SB_45585| Best HMM Match : Swi3 (HMM E-Value=0.37) 27 5.9
SB_6594| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.9
SB_58221| Best HMM Match : TBC (HMM E-Value=2.9e-08) 27 5.9
SB_36059| Best HMM Match : TolA (HMM E-Value=0.1) 27 5.9
SB_35264| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.9
SB_44568| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_49663| Best HMM Match : TolA (HMM E-Value=0.059) 27 7.7
SB_47152| Best HMM Match : Vicilin_N (HMM E-Value=5.4) 27 7.7
SB_22215| Best HMM Match : Rib_hydrolayse (HMM E-Value=0.035) 27 7.7
SB_810| Best HMM Match : TAF4 (HMM E-Value=4.7e-31) 27 7.7
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 31.9 bits (69), Expect = 0.27
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +1
Query: 202 LREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*KDK 336
LR+ E KEK +AK +EKER A + K E + K+ K+K
Sbjct: 322 LRQKEEKEKQRLEAKAAKEKERLEAKQKKEQERLEKQAEKEKKEK 366
>SB_17568| Best HMM Match : Ldl_recept_a (HMM E-Value=0.04)
Length = 189
Score = 31.1 bits (67), Expect = 0.48
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 193 EAKLREIE-AKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*KDK 336
E + EIE AK+K + D +L+ E+++ E++A ++ K+ KDK
Sbjct: 134 EKRRHEIELAKQKKLEDLRLQLEQKKQVVAELQATKDKVEAVEKEAKDK 182
>SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016)
Length = 1284
Score = 31.1 bits (67), Expect = 0.48
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = +1
Query: 163 AFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK 324
A HQ ++SK + L E + +RD +L +EKE AS++++ LE+ A +K
Sbjct: 696 AHHQQKISKLNSCLEEAVSDMNSLRD-ELNKEKEAASSMKM-TLEKKAKEALEK 747
>SB_3226| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.021)
Length = 1217
Score = 30.7 bits (66), Expect = 0.63
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +1
Query: 172 QNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALE-EMASGTAKK 324
++R +K+ ++ E + +E+ ++ K KEEKER E +A E E A AK+
Sbjct: 747 KDRKERKKIEMEEAKKREQEEKERKEKEEKERIEREEREAKEREYAERIAKQ 798
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 30.7 bits (66), Expect = 0.63
Identities = 12/43 (27%), Positives = 28/43 (65%)
Frame = +1
Query: 172 QNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEE 300
Q + ++E ++RE E ++K +++ ++++ +E A +ALEE
Sbjct: 176 QEQQEEEERRIREEEERQKALKEERMRKLQEEARLAAQRALEE 218
>SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1126
Score = 30.7 bits (66), Expect = 0.63
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 187 KKEAKLREIEAKEKVIRDAKLKEEKERASALEI--KALEEMASGTAKK 324
++E +L+ E K ++ R+ ++EE+ER LE+ K +EE A K
Sbjct: 963 RRERELKAREEKLRLAREQMMREERERTLKLELERKRMEERLKDQASK 1010
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 172 QNRLSKKEAKLREIEAKEKVIR-DAKLKEEKER 267
+ R +K ++EIE KEK + K KEEKER
Sbjct: 911 RERTEEKARIMKEIEEKEKKEEAERKAKEEKER 943
>SB_41667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 30.3 bits (65), Expect = 0.83
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 8/59 (13%)
Frame = +1
Query: 187 KKEAKLREIEAKEKVIRDAKLKEEKERASALEIKAL-----EEMA---SGTAKK*KDKI 339
+KE KL E +AKE + A ++E++R ALE + L E++A + AKK K+K+
Sbjct: 259 EKERKLAEKKAKEDAAKAAAEEKERQRQEALEAERLAKEKEEQLAKEKATQAKKEKEKL 317
>SB_19719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 5 ELDFSKKYRTRIVLQYSNYITKCQIYHTEL 94
EL F ++ RT + +Q +Y T+C I TEL
Sbjct: 149 ELLFGRRIRTTVPVQCYSYFTECHIKSTEL 178
>SB_28257| Best HMM Match : Gp-FAR-1 (HMM E-Value=3.2)
Length = 497
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1
Query: 172 QNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*KDKIV 342
QN S+K R++ K V + A +++EK R + + +E + T K KD+IV
Sbjct: 153 QNEASEKSGDARQV--KRSVDKKASVRDEKNRHDEDKKQTEKEEGADTNKAPKDRIV 207
>SB_23562| Best HMM Match : DUF288 (HMM E-Value=1.1)
Length = 411
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = -1
Query: 176 FWWKAPYRTPTVRK--DQRPNLIRG-DIRTG 93
+WW++PY P R+ +Q NL G D+ TG
Sbjct: 246 YWWRSPYGLPNCRRAYEQLSNLTLGHDLSTG 276
>SB_22224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1106
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +1
Query: 172 QNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*KDK 336
Q+ + +E+K RE + KEK R+ +L+ +KER + K EE KK K++
Sbjct: 974 QSEVDAEESKKREKKDKEKEKRERELQRKKER-DEQKRKKEEEKREREEKKRKEE 1027
>SB_30472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 482
Score = 29.1 bits (62), Expect = 1.9
Identities = 22/64 (34%), Positives = 35/64 (54%)
Frame = +1
Query: 145 VGVLYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK 324
+G+L ++ + EA+ + I KEK +AK +EE+ER E K E A+ A+K
Sbjct: 295 IGMLKVLLNKGMTAVAEAEQKGI--KEKAETEAKKQEEEERKRDEEKKKAER-AAAEARK 351
Query: 325 *KDK 336
K+K
Sbjct: 352 KKEK 355
>SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42)
Length = 1712
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +1
Query: 154 LYGAFHQNRLSKKEAKLR-EIEAKEKVIRDAKLKEEKERASAL 279
L F + +S+K+ +L E++A+EK ++ KLK EKE+++ L
Sbjct: 76 LVAKFQEEAVSEKQNRLSAELQAQEK-LQIEKLKSEKEKSAQL 117
>SB_47491| Best HMM Match : Acyl-CoA_dh_N (HMM E-Value=0.36)
Length = 431
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 181 LSKKEAKLREIEAKEKVIRDAKLKEE-KERASALEIKALEEM 303
L+ +E + R I+ +E + AKLKEE +ER +K LE++
Sbjct: 106 LTPEELEQRRIKRQEAAAKRAKLKEEAEERREQERMKKLEKL 147
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/58 (24%), Positives = 35/58 (60%)
Frame = +1
Query: 172 QNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*KDKIVI 345
+ + ++A+L+E++ KEK+ ++ + K+++ER E K ++ K+ + K++I
Sbjct: 888 KEKKDNEKARLKEMKDKEKIEKEKREKDKREREEK-ERKRRQQQLEKEKKEKEKKLLI 944
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 187 KKEAKLREIEAKEKVIRDAKLKEEKER 267
K++ +LRE E KEK + K+EKER
Sbjct: 953 KQKERLREKEEKEKQKEAERAKKEKER 979
>SB_21494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 28.3 bits (60), Expect = 3.4
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +1
Query: 130 WSFLTVGV--LYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEM 303
W+FL V + L G L+KK KLR E EK+ K +EE R + L +
Sbjct: 96 WAFLRVLMVELTGFIDLQVLNKKYNKLRVTEFTEKLYNSFKSREEDMRNATKTALLLRKF 155
Query: 304 AS 309
A+
Sbjct: 156 AT 157
>SB_33744| Best HMM Match : SMC_N (HMM E-Value=0)
Length = 1014
Score = 27.9 bits (59), Expect = 4.4
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Frame = +1
Query: 172 QNRLSKKEAKLREIE---AKEKVIRDAKLKEEKERASALEI-KALEEM 303
Q + KK++KL+EIE A+E KLKE ERAS LE K + E+
Sbjct: 182 QRTIEKKDSKLQEIETILAEEITPTLKKLKE--ERASYLEYQKVMREL 227
>SB_3809| Best HMM Match : DUF1014 (HMM E-Value=8.7e-09)
Length = 265
Score = 27.9 bits (59), Expect = 4.4
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 175 NRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIK-ALEEMASGTAKK*KDK 336
N+ ++KE K RE E K D ++EK+R ALE K A +M K K K
Sbjct: 46 NKSAEKERKEREEEDKLWEDDDKHEQQEKKRLEALERKNAARQMLEEEEKSLKGK 100
>SB_58681| Best HMM Match : MAP65_ASE1 (HMM E-Value=3.3e-26)
Length = 631
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/42 (28%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Frame = +1
Query: 196 AKLREIEAKEKV---IRDAKLKEEKERASALEIKALEEMASG 312
++L+E +K+ V + D +K+EK+R AL+++ +++ G
Sbjct: 233 SELKEYNSKKNVTENVSDPTMKDEKQRLQALKLQHMQKFIEG 274
>SB_45217| Best HMM Match : Linker_histone (HMM E-Value=4.4e-27)
Length = 228
Score = 27.9 bits (59), Expect = 4.4
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +1
Query: 160 GAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*KDKI 339
G+F ++ +KKE ++ E +AK K R + + EKE A ++K ++ G K K+
Sbjct: 80 GSFKLSQDTKKEGEMAEKKAKAKE-RKLQKQLEKEAAEEEKVKKPKKSRDGEKTKKSKKV 138
>SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022)
Length = 1421
Score = 27.5 bits (58), Expect = 5.9
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = +1
Query: 172 QNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEE 300
Q + +K+ + E+ KEK + K+ +EK + +E + +E
Sbjct: 1184 QKKREEKKKREEEMREKEKEMEQNKIDQEKRKQELMESRRFQE 1226
>SB_45585| Best HMM Match : Swi3 (HMM E-Value=0.37)
Length = 341
Score = 27.5 bits (58), Expect = 5.9
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 172 QNRLSKKEAKLR-EIEAKEKVIRDAKLKEEKERASALEIKALEE 300
QNR ++++K+ + EK+ RD+K KEE+ER + E L E
Sbjct: 201 QNRTIEEKSKIAFDKWMSEKLKRDSKKKEEEERKAREEKDKLIE 244
>SB_6594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 175 NRLSKKEAKLREIEAKEKVIRDAKLKEEKER 267
NR+ K+EA E + K +R AK KE+K+R
Sbjct: 162 NRVEKREALKTRFEIERK-LRQAKKKEKKKR 191
>SB_58221| Best HMM Match : TBC (HMM E-Value=2.9e-08)
Length = 580
Score = 27.5 bits (58), Expect = 5.9
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +1
Query: 103 ISPLIKFGRWSFLTVGVLYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALE 282
ISP ++ W FL YG ++R + AK E + + + K+EK A E
Sbjct: 194 ISPSLRGDVWRFLLGYYKYGCTFESRKTLCRAKEDEYQTMKMQWQTISAKQEKRFAEFRE 253
Query: 283 IKAL 294
K L
Sbjct: 254 RKQL 257
>SB_36059| Best HMM Match : TolA (HMM E-Value=0.1)
Length = 1936
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 181 LSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK 324
+ +K + ++ K ++ R K ++EKE + LE K LEE + K+
Sbjct: 1201 VDRKHLEQKKQRLKREMERQEKERKEKEMQALLEEKRLEEEKNAKRKR 1248
>SB_35264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 27.5 bits (58), Expect = 5.9
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +1
Query: 139 LTVGVLYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTA 318
+ V + G + + K ++L+ I V+R A K KE++S L+ E AS T+
Sbjct: 313 MVVDEITGTQNTASSAAKLSRLKTIVNYSSVVRSAPAKGGKEKSSLLDSLRSESFASPTS 372
Query: 319 KK 324
++
Sbjct: 373 EE 374
>SB_44568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = -1
Query: 149 PTVRKDQRPNLIRGDIRTGAPYGKSDILLYNCYTVKQFLYDTFWK 15
PT+R + G K LLYNC +F D FWK
Sbjct: 265 PTIRSRKADITEFGSAHISQYDAKQANLLYNCPDYPEFPKDFFWK 309
>SB_49663| Best HMM Match : TolA (HMM E-Value=0.059)
Length = 591
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = +1
Query: 187 KKEAKLREIEAKEKVIRDAKLKEEKER 267
KKE + + EA+EK +++ +++ EKER
Sbjct: 346 KKEEEKKRKEAEEKRVKEEQIRLEKER 372
>SB_47152| Best HMM Match : Vicilin_N (HMM E-Value=5.4)
Length = 330
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 135 LPHRRSSIRRLPPEQAIKERSETTRD*SQREGHPR 239
L +R R+LPPEQ K +++ R S ++ HP+
Sbjct: 209 LTPKRPKTRQLPPEQRCKS-TQSPRILSHQQSHPK 242
>SB_22215| Best HMM Match : Rib_hydrolayse (HMM E-Value=0.035)
Length = 186
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -1
Query: 110 GDIRTGAPYGKSDILLYNCYTVKQFLYDTFWKNLI 6
G TG DI+L CY K+F+ D +++ +
Sbjct: 25 GTSNTGTTRNFKDIVLGRCYYYKEFMLDDVYRSSV 59
>SB_810| Best HMM Match : TAF4 (HMM E-Value=4.7e-31)
Length = 883
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 178 RLSKKEAKLREIEAKEKVIRDAKLKEEKE 264
++ + E K RE+ +E ++R AKL++E+E
Sbjct: 682 QIDEVERKKRELREREVLMRAAKLQQEEE 710
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,702,170
Number of Sequences: 59808
Number of extensions: 197495
Number of successful extensions: 770
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 969807871
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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