Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_A23
         (730 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    27   0.45 
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            25   1.8  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    25   3.2  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   5.5  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   9.7  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   9.7  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   9.7  

>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 27.5 bits (58), Expect = 0.45
 Identities = 19/84 (22%), Positives = 36/84 (42%)
 Frame = +3

Query: 213 SETTGN*LKIINSLLITVQSEPILTRTNLFGIDFKTFVSFAHIARQRSCERDEYTLYCFR 392
           S   G+ +    +++ T ++ P   RTN F   F+  +    IA  R      YT+  F 
Sbjct: 344 SAAVGSTIPSFLNVIDTNEAPPTYNRTNKFTRGFQNLIDAYGIASYREANPALYTIITFP 403

Query: 393 DVL*ILL*IKNSVNNLFLAFYGRW 464
            +  I+    +  + + +A +G W
Sbjct: 404 FLFGIM--FGDLGHGMIMALFGLW 425


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 50  DARPTVYENLLRLWWLYLRINIYK 121
           D  P ++E+L  L WL +R NI++
Sbjct: 173 DIGPDLFEHLPNLTWLDMRDNIFR 196


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 19/84 (22%), Positives = 33/84 (39%)
 Frame = +3

Query: 213 SETTGN*LKIINSLLITVQSEPILTRTNLFGIDFKTFVSFAHIARQRSCERDEYTLYCFR 392
           S   G+ +    +++ T +  P   +TN F   F+  +    IA  R      YT+  F 
Sbjct: 336 SAAVGSAVPSFLNIIATDEDPPTYNKTNKFTRGFQNLIESYGIATYREANPALYTIITFP 395

Query: 393 DVL*ILL*IKNSVNNLFLAFYGRW 464
            +  I+    +  + L L   G W
Sbjct: 396 FLFAIM--FGDLGHGLILFLLGMW 417


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 391 LKQYKVYSSRSHERCRAMCANET 323
           L + K  SS  +   RA+CAN+T
Sbjct: 771 LAEVKAKSSDKNSTARALCANKT 793


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +2

Query: 491 SMVTAVHDATNTKNNICSSNNKKYCNRICLNIKNNRS 601
           S+  A  + +N  NN  S+NN    N I  N  NN S
Sbjct: 191 SLPNASSNNSNNNNNSSSNNNN---NTISSNNNNNNS 224


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +2

Query: 491 SMVTAVHDATNTKNNICSSNNKKYCNRICLNIKNNRS 601
           S+  A  + +N  NN  S+NN    N I  N  NN S
Sbjct: 191 SLPNASSNNSNNNNNSSSNNNN---NTISSNNNNNNS 224


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +2

Query: 491 SMVTAVHDATNTKNNICSSNNKKYCNRICLNIKNNRS 601
           S+  A  + +N  NN  S+NN    N I  N  NN S
Sbjct: 143 SLPNASSNNSNNNNNSSSNNNN---NTISSNNNNNNS 176


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,847
Number of Sequences: 2352
Number of extensions: 13050
Number of successful extensions: 24
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)