Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_A22
         (473 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73102-18|CAI91178.1|   90|Caenorhabditis elegans Hypothetical p...    37   0.009
AL132904-2|CAC35833.1|   86|Caenorhabditis elegans Hypothetical ...    36   0.015
Z81117-12|CAB03320.2|  345|Caenorhabditis elegans Hypothetical p...    28   3.9  
Z82059-12|CAB04880.1|  622|Caenorhabditis elegans Hypothetical p...    27   5.2  
U20783-1|AAC46845.1|  535|Caenorhabditis elegans unknown protein.      27   5.2  
AL032665-2|CAA21772.1|  622|Caenorhabditis elegans Hypothetical ...    27   5.2  
Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical pr...    27   6.9  
Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical pr...    27   6.9  
Z50795-2|CAA90663.1|  618|Caenorhabditis elegans Hypothetical pr...    27   9.1  

>Z73102-18|CAI91178.1|   90|Caenorhabditis elegans Hypothetical
           protein B0035.18 protein.
          Length = 90

 Score = 36.7 bits (81), Expect = 0.009
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = +3

Query: 189 RGLLNAVIKRNIIVALALSGVAGFTFKQIIGNERKRKYAEFYRTYDAEKEFEEM--RKKG 362
           R +L +  KR I V+LA++ V+   F       R  KY EF+  YD+    +E+    KG
Sbjct: 8   RNMLQSYGKRGIYVSLAVAVVSTAAFNAFYVWPRHNKYEEFFANYDSYTRMKEICSANKG 67

Query: 363 LFQSC 377
              +C
Sbjct: 68  YMHTC 72


>AL132904-2|CAC35833.1|   86|Caenorhabditis elegans Hypothetical
           protein Y111B2A.2 protein.
          Length = 86

 Score = 35.9 bits (79), Expect = 0.015
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = +3

Query: 189 RGLLNAVIKRNIIVALALSGVAGFTFKQIIGNERKRKYAEFYRTYDAEKEFEEM--RKKG 362
           R +L +  KR I V+LA++ V+   F       R  KY EF+  YD     +E+    KG
Sbjct: 4   RNMLQSYGKRGIYVSLAVAVVSTAAFNAFYVWPRHNKYEEFFANYDPYTRMKEICAANKG 63

Query: 363 LFQSC 377
              +C
Sbjct: 64  YMHTC 68


>Z81117-12|CAB03320.2|  345|Caenorhabditis elegans Hypothetical
           protein T06E6.5 protein.
          Length = 345

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = -1

Query: 374 GLE*TLLAHLLKFLFSIIGSVEFSIL-SLALITNDLLEGKTSDARESQSNNN 222
           G++ TL+A+   FL    G +E  +  S++LI+ DLLEG        + NNN
Sbjct: 84  GMKQTLVANR-DFLILAAGHLENLLRNSISLISIDLLEGADFSENSDRDNNN 134


>Z82059-12|CAB04880.1|  622|Caenorhabditis elegans Hypothetical
           protein T27E9.7 protein.
          Length = 622

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +1

Query: 88  PVPXCVIRHVSFQSKSHSPWL 150
           P P  +++HVSF+   ++PW+
Sbjct: 390 PPPVIMVQHVSFRYNENTPWI 410


>U20783-1|AAC46845.1|  535|Caenorhabditis elegans unknown protein.
          Length = 535

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +1

Query: 88  PVPXCVIRHVSFQSKSHSPWL 150
           P P  +++HVSF+   ++PW+
Sbjct: 389 PPPVIMVQHVSFRYNENTPWI 409


>AL032665-2|CAA21772.1|  622|Caenorhabditis elegans Hypothetical
           protein T27E9.7 protein.
          Length = 622

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +1

Query: 88  PVPXCVIRHVSFQSKSHSPWL 150
           P P  +++HVSF+   ++PW+
Sbjct: 390 PPPVIMVQHVSFRYNENTPWI 410


>Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical protein
            C09H6.1b protein.
          Length = 1309

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 68   KSAVLCRLCPXVSFGMFHFSQNLIRHGWRK 157
            K+A  C+ C        +F ++L RHGW +
Sbjct: 1159 KNAKYCKKCTFKCVSQSNFIEHLDRHGWNQ 1188


>Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical protein
            C09H6.1a protein.
          Length = 1311

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 68   KSAVLCRLCPXVSFGMFHFSQNLIRHGWRK 157
            K+A  C+ C        +F ++L RHGW +
Sbjct: 1159 KNAKYCKKCTFKCVSQSNFIEHLDRHGWNQ 1188


>Z50795-2|CAA90663.1|  618|Caenorhabditis elegans Hypothetical
           protein R166.2 protein.
          Length = 618

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +3

Query: 141 AMAGASAVSXARKPQLRGLLNAVIKRNIIVALALSGVAGF 260
           A+A A+A   A +PQ  G +  +IK+ I +   +S V+GF
Sbjct: 4   AVAPAAAPEAAPEPQQGGGIWGMIKQAITIYFVVSMVSGF 43


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,050,427
Number of Sequences: 27780
Number of extensions: 135121
Number of successful extensions: 358
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 358
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)