Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_A18
(783 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical pr... 36 0.043
Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical pr... 36 0.043
M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.ele... 36 0.043
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 34 0.100
U58738-3|AAQ81272.1| 349|Caenorhabditis elegans Apex-related ge... 34 0.100
U58738-2|AAQ81271.1| 357|Caenorhabditis elegans Apex-related ge... 34 0.100
U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crum... 34 0.100
Z98877-2|CAB11570.1| 907|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z73427-8|CAA97804.1| 302|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical pr... 33 0.23
U50143-1|AAB02199.1| 349|Caenorhabditis elegans ARG-1 protein. 33 0.23
U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein. 33 0.23
M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.ele... 33 0.23
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 33 0.23
AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior phar... 33 0.23
U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical p... 32 0.53
U58750-13|AAB00653.1| 616|Caenorhabditis elegans Hypothetical p... 32 0.53
AL110485-23|CAB60377.3| 770|Caenorhabditis elegans Hypothetical... 32 0.53
Z66494-3|CAA91258.2| 520|Caenorhabditis elegans Hypothetical pr... 31 0.70
U58746-6|AAB00626.2| 378|Caenorhabditis elegans Hypothetical pr... 31 0.70
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 31 0.70
Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical pr... 31 0.93
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr... 31 0.93
U40420-1|AAA81430.1| 2214|Caenorhabditis elegans Hypothetical pr... 31 0.93
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 31 0.93
Z81064-2|CAB02963.1| 259|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical p... 31 1.2
U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 31 1.2
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 31 1.2
Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical p... 30 1.6
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81482-4|CAB03958.1| 104|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p... 30 1.6
U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein. 30 1.6
U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein. 30 1.6
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like... 30 1.6
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 30 1.6
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 30 1.6
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 30 1.6
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 30 1.6
AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein. 30 1.6
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 30 1.6
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 30 1.6
Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical p... 29 2.8
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr... 29 2.8
X77495-1|CAA54629.1| 402|Caenorhabditis elegans lag-2 protein. 29 2.8
AL032660-1|CAA21752.1| 711|Caenorhabditis elegans Hypothetical ... 29 2.8
AC024205-1|AAF36047.1| 402|Caenorhabditis elegans Lin-12 and gl... 29 2.8
Z70754-3|CAA94773.1| 293|Caenorhabditis elegans Hypothetical pr... 29 3.7
U61950-6|AAC24291.1| 528|Caenorhabditis elegans Nuclear hormone... 29 5.0
U61950-5|AAL02466.1| 576|Caenorhabditis elegans Nuclear hormone... 29 5.0
AF273791-1|AAG15139.1| 525|Caenorhabditis elegans nuclear recep... 29 5.0
AF273790-1|AAG15138.1| 534|Caenorhabditis elegans nuclear recep... 29 5.0
AF273787-1|AAG15135.1| 527|Caenorhabditis elegans nuclear recep... 29 5.0
Z69883-4|CAA93742.2| 480|Caenorhabditis elegans Hypothetical pr... 28 8.7
>Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 35.5 bits (78), Expect = 0.043
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +1
Query: 664 SQYYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
S++ C NGGVC CECQ GY GP CE
Sbjct: 451 SRHPCKNGGVCKNTGY-------CECQYGYTGPTCE 479
Score = 31.9 bits (69), Expect = 0.53
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFKD 780
C NGG C V + + C C G+ G CE KD
Sbjct: 416 CANGGTCEGV----NGVIRCNCPNGFSGDYCEIKD 446
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 670 YYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFK 777
Y C N G C + PI C C+ G+ G RCE +
Sbjct: 278 YVCQNDGYC-AHDSNQMPI--CYCEQGFTGQRCEIE 310
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C+N CF + + C C+ GY G CE
Sbjct: 242 CVNNSTCFNL----HGDFTCTCKPGYAGKYCE 269
>Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 35.5 bits (78), Expect = 0.043
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +1
Query: 664 SQYYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
S++ C NGGVC CECQ GY GP CE
Sbjct: 451 SRHPCKNGGVCKNTGY-------CECQYGYTGPTCE 479
Score = 31.9 bits (69), Expect = 0.53
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFKD 780
C NGG C V + + C C G+ G CE KD
Sbjct: 416 CANGGTCEGV----NGVIRCNCPNGFSGDYCEIKD 446
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 670 YYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFK 777
Y C N G C + PI C C+ G+ G RCE +
Sbjct: 278 YVCQNDGYC-AHDSNQMPI--CYCEQGFTGQRCEIE 310
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C+N CF + + C C+ GY G CE
Sbjct: 242 CVNNSTCFNL----HGDFTCTCKPGYAGKYCE 269
>M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein (
C.elegans glp-1 gene,complete cds. ).
Length = 1295
Score = 35.5 bits (78), Expect = 0.043
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +1
Query: 664 SQYYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
S++ C NGGVC CECQ GY GP CE
Sbjct: 451 SRHPCKNGGVCKNTGY-------CECQYGYTGPTCE 479
Score = 31.9 bits (69), Expect = 0.53
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFKD 780
C NGG C V + + C C G+ G CE KD
Sbjct: 416 CANGGTCEGV----NGVIRCNCPNGFSGDYCEIKD 446
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 670 YYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFK 777
Y C N G C + PI C C+ G+ G RCE +
Sbjct: 278 YVCQNDGYC-AHDSNQMPI--CYCEQGFTGQRCEIE 310
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C+N CF + + C C+ GY G CE
Sbjct: 242 CVNNSTCFNL----HGDFTCTCKPGYAGKYCE 269
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
F55H12.3 protein.
Length = 2972
Score = 34.3 bits (75), Expect = 0.100
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 6/38 (15%)
Frame = +1
Query: 676 CLNGGVCF------TVVISXSPIYNCECQXGYVGPRCE 771
C NGG C T +S YNC CQ GY G CE
Sbjct: 1771 CFNGGTCSIFNYNTTTKVSIES-YNCTCQTGYFGTNCE 1807
>U58738-3|AAQ81272.1| 349|Caenorhabditis elegans Apex-related genes
protein 1, isoformb protein.
Length = 349
Score = 34.3 bits (75), Expect = 0.100
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C NGGVC T Y C+C ++GPRCE
Sbjct: 197 CANGGVCSTD-------YKCQCPSEFLGPRCE 221
>U58738-2|AAQ81271.1| 357|Caenorhabditis elegans Apex-related genes
protein 1, isoforma protein.
Length = 357
Score = 34.3 bits (75), Expect = 0.100
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C NGGVC T Y C+C ++GPRCE
Sbjct: 184 CANGGVCSTD-------YKCQCPSEFLGPRCE 208
>U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crumbs
homolog protein 1 protein.
Length = 1722
Score = 34.3 bits (75), Expect = 0.100
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 649 CEPEYSQYYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C S+ CLNGG C V + ++ CEC G+ G C+
Sbjct: 18 CNRACSRNTCLNGGTC--TVNDETRMFQCECPKGFSGLLCQ 56
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +1
Query: 640 TFKCEPEYSQYYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFK 777
+++ P S CLNGG C + P C C+ G+ GP CE K
Sbjct: 362 SYRSHPTCSDIRCLNGGSC-KLDAEGEPF--CVCEEGFDGPFCEPK 404
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFK 777
C N GVC T + ++CECQ ++G RCE +
Sbjct: 1414 CNNDGVCRT---NDENTFSCECQKFFMGTRCEIE 1444
Score = 31.5 bits (68), Expect = 0.70
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 652 EPEYSQYYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFKD 780
E E + +C NG C + S Y C+C G+ G CE +D
Sbjct: 164 EDECKENFCQNGADCENLKGS----YECKCLKGFSGKYCEIQD 202
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 652 EPEYSQYYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
EP + + C N G C ++ + C C G+VG CE
Sbjct: 126 EPSCATHTCQNNGTC----VAENGNVKCACPPGFVGDHCE 161
Score = 30.3 bits (65), Expect = 1.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +1
Query: 727 YNCECQXGYVGPRCEFKD 780
Y C C+ G++GPRC ++
Sbjct: 1580 YKCACRNGFIGPRCSVRN 1597
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 673 YCLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFK 777
YC N G C IS +C+C G+ G CE K
Sbjct: 210 YCHNNGQC----ISTGSDLSCKCSPGFDGAFCELK 240
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +1
Query: 646 KCEPEY---SQYYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
KC+ ++ S+ C +G C V + + C C+ G+ G +CE
Sbjct: 500 KCDQKHDKCSKVSCPSGQTCSQVNDNVNITAQCGCEIGHFGQQCE 544
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFKDL 783
C N G C + C C GY G CE +D+
Sbjct: 1299 CQNFGQCMQ---KTDTFFECNCMDGYSGELCEQRDV 1331
>Z98877-2|CAB11570.1| 907|Caenorhabditis elegans Hypothetical
protein Y69H2.2 protein.
Length = 907
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFKD 780
C NGG C ++V+S S + C C G+ G RCE K+
Sbjct: 155 CQNGGTC-SMVLSNSN-WICNCTEGWQGRRCETKN 187
Score = 31.1 bits (67), Expect = 0.93
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C+NG C T V + Y C C G+ G CE
Sbjct: 429 CVNGK-CETTVDGITTNYTCTCDDGWTGANCE 459
>Z73427-8|CAA97804.1| 302|Caenorhabditis elegans Hypothetical
protein F58B3.8 protein.
Length = 302
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFKDL 783
C NGGVC I +P CEC Y G +CE K +
Sbjct: 191 CENGGVC----IDSNPKPICECSKAYRGEKCEKKHI 222
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical protein
F40E10.4 protein.
Length = 1410
Score = 33.1 bits (72), Expect = 0.23
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C NGG C ++S Y+C C+ GY G CE
Sbjct: 1034 CQNGGSCVDGILS----YDCLCRPGYAGQYCE 1061
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFK 777
C NGG C ++ S Y C+C Y G CE K
Sbjct: 956 CENGGKCVDLINS----YRCDCPMEYEGKHCEDK 985
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C N +C T + S Y C C G+ G CE
Sbjct: 878 CKNNAICET---TSSRKYTCNCTPGFYGVHCE 906
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = +1
Query: 649 CEPEYSQYY---CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
CE + Y CLN C ++ + +NC C G+ G CE
Sbjct: 905 CENQIDACYGSPCLNNATC---KVAQAGRFNCYCNKGFEGDYCE 945
>Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical
protein R107.8 protein.
Length = 1429
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 670 YYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
++C N G C SP+ C+C+ G++G RCE
Sbjct: 411 FHCENDGTCMHTS-DHSPV--CQCKNGFIGKRCE 441
Score = 32.3 bits (70), Expect = 0.40
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFK 777
C NGGVC CEC G+ G RCE K
Sbjct: 591 CQNGGVCIN---EEEKGRKCECSYGFSGARCEEK 621
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +1
Query: 655 PEYSQYYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
P+ YC NGG C C+C GY G CE
Sbjct: 214 PDGRSMYCQNGGFC------DKASSKCQCPPGYHGSTCE 246
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C+NGG C I C C G+ G RCE
Sbjct: 123 CMNGGQC----IGAGNRAKCACPDGFKGERCE 150
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C NGGVC ++C+C G+ G CE
Sbjct: 552 CSNGGVCH----QHRESFSCDCPPGFYGNGCE 579
>U50143-1|AAB02199.1| 349|Caenorhabditis elegans ARG-1 protein.
Length = 349
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C NGGVC T Y C+C ++GPRCE
Sbjct: 197 CANGGVCSTD-------YICQCPSEFLGPRCE 221
>U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein.
Length = 515
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C NGG+C ++ S S Y C C +VG +C+
Sbjct: 250 CANGGIC-SIDSSSSTGYKCHCPFEFVGSQCK 280
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 664 SQYYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
+++ C NGG C ++ C+C+ G+ G CE
Sbjct: 290 AEHVCKNGGACISM---DDTNIQCKCRRGFSGKFCE 322
>M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein (
C.elegans homeotic lin-12 protein gene, complete cds. ).
Length = 1429
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 670 YYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
++C N G C SP+ C+C+ G++G RCE
Sbjct: 411 FHCENDGTCMHTS-DHSPV--CQCKNGFIGKRCE 441
Score = 32.3 bits (70), Expect = 0.40
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFK 777
C NGGVC CEC G+ G RCE K
Sbjct: 591 CQNGGVCIN---EEEKGRKCECSYGFSGARCEEK 621
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +1
Query: 655 PEYSQYYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
P+ YC NGG C C+C GY G CE
Sbjct: 214 PDGRSMYCQNGGFC------DKASSKCQCPPGYHGSTCE 246
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C+NGG C I C C G+ G RCE
Sbjct: 123 CMNGGQC----IGAGNRAKCACPDGFKGERCE 150
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C NGGVC ++C+C G+ G CE
Sbjct: 552 CSNGGVCH----QHRESFSCDCPPGFYGNGCE 579
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 33.1 bits (72), Expect = 0.23
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C NGG C ++S Y+C C+ GY G CE
Sbjct: 1034 CQNGGSCVDGILS----YDCLCRPGYAGQYCE 1061
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFK 777
C NGG C ++ S Y C+C Y G CE K
Sbjct: 956 CENGGKCVDLINS----YRCDCPMEYEGKHCEDK 985
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C N +C T + S Y C C G+ G CE
Sbjct: 878 CKNNAICET---TSSRKYTCNCTPGFYGVHCE 906
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = +1
Query: 649 CEPEYSQYY---CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
CE + Y CLN C ++ + +NC C G+ G CE
Sbjct: 905 CENQIDACYGSPCLNNATC---KVAQAGRFNCYCNKGFEGDYCE 945
>AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior pharynx
in excess protein1 protein.
Length = 515
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C NGG+C ++ S S Y C C +VG +C+
Sbjct: 250 CANGGIC-SIDSSSSTGYKCHCPFEFVGSQCK 280
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 664 SQYYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
+++ C NGG C ++ C+C+ G+ G CE
Sbjct: 290 AEHVCKNGGACISM---DDTNIQCKCRRGFSGKFCE 322
>U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical
protein F47C12.1 protein.
Length = 1827
Score = 31.9 bits (69), Expect = 0.53
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C NGGVC + S C C+ G+ GP+CE
Sbjct: 1754 CPNGGVCHDLPGVKST--TCLCRTGFAGPQCE 1783
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFK 777
C NGG C V Y C C + G RC+F+
Sbjct: 1716 CYNGGKCEQV----GTTYKCTCPKMFNGARCQFE 1745
Score = 27.9 bits (59), Expect = 8.7
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1
Query: 733 CECQXGYVGPRCE 771
C C+ GYVG RCE
Sbjct: 1693 CHCKPGYVGDRCE 1705
>U58750-13|AAB00653.1| 616|Caenorhabditis elegans Hypothetical
protein F55G1.13 protein.
Length = 616
Score = 31.9 bits (69), Expect = 0.53
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 673 YCLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
YC NGG C + +P C+C Y G +C+
Sbjct: 144 YCSNGGTCEMLFSDTTPY--CQCPFDYYGDKCQ 174
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCEF 774
CL GVC S Y+C C G+ G +C++
Sbjct: 108 CLQNGVCS----SSGGTYSCACATGFFGEQCQY 136
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Frame = +1
Query: 649 CEPEYSQYY--CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
CE S Y C NGG C + C+C + G CE
Sbjct: 399 CETFDSCYINKCENGGTCVPTYNLLDSTFTCQCTPDWKGTYCE 441
>AL110485-23|CAB60377.3| 770|Caenorhabditis elegans Hypothetical
protein Y46G5A.29 protein.
Length = 770
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPI-YNCECQXGYVGPRCEFK 777
C N CF SP+ Y+C+CQ G VG CE +
Sbjct: 412 CDNNSTCFND--KRSPVGYSCKCQNGTVGKLCEIE 444
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 649 CEPEYSQYYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
CE E + C NGG C+ ++ C+C G G RCE
Sbjct: 441 CEIECPKDQCENGGQCY---LNTFGKIGCKCVPGTTGRRCE 478
>Z66494-3|CAA91258.2| 520|Caenorhabditis elegans Hypothetical
protein C34C6.3 protein.
Length = 520
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFK 777
CLNGG+C S C C G+ G RC+ K
Sbjct: 173 CLNGGICVEQANSLIE-KRCFCSYGFFGQRCDQK 205
>U58746-6|AAB00626.2| 378|Caenorhabditis elegans Hypothetical
protein R05G6.9 protein.
Length = 378
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C N G+C S ++C CQ GY G RCE
Sbjct: 183 CNNKGLCLGTKNS----FSCACQIGYTGSRCE 210
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C + G+C I + +C C GY G RCE
Sbjct: 261 CNSNGIC----IGTKNLKSCICAPGYYGSRCE 288
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 31.5 bits (68), Expect = 0.70
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1
Query: 631 TFPTFKCEPEYSQYYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCEF 774
T P CE + + Y C NG C + C C+ GY+G C+F
Sbjct: 477 TQPLSSCE-KANAYMCQNGAGCKK---ESETEFTCFCKEGYIGKFCQF 520
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/44 (27%), Positives = 18/44 (40%)
Frame = +1
Query: 640 TFKCEPEYSQYYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
T C+ + +C NG C+ +S P C + G CE
Sbjct: 864 TETCDTRCTADFCQNGAKCYEDFVSGMPFCQCAFPDVHSGVNCE 907
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/48 (31%), Positives = 19/48 (39%), Gaps = 4/48 (8%)
Frame = +1
Query: 649 CEPEYSQYYCLNGGVCFTVVISXSP---IYNCEC-QXGYVGPRCEFKD 780
CE S CLNGG C + P C+C + Y G C +
Sbjct: 1157 CEVGCSSITCLNGGHCSVAWANTDPSAATTTCDCSRTSYTGASCSLDE 1204
>Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical
protein F20B10.1 protein.
Length = 1180
Score = 31.1 bits (67), Expect = 0.93
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFKDL 783
C NGG C V S Y C C+ GY G C DL
Sbjct: 453 CENGGGC---VQSALDDYVCNCKEGYKGKNCHTTDL 485
>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical
protein W02C12.1 protein.
Length = 1372
Score = 31.1 bits (67), Expect = 0.93
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
CLN C + Y C C+ G+ GP+CE
Sbjct: 227 CLNDAQC----VDMGGAYKCVCKSGWTGPKCE 254
Score = 31.1 bits (67), Expect = 0.93
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C NGG C + CEC G+ G RCE
Sbjct: 339 CENGGKCAEAA---GGLQKCECSPGFTGERCE 367
Score = 30.3 bits (65), Expect = 1.6
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 727 YNCECQXGYVGPRCEFK 777
+ C C+ GY GPRC+ K
Sbjct: 202 FKCVCKPGYTGPRCDVK 218
Score = 28.7 bits (61), Expect = 5.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 727 YNCECQXGYVGPRCEFKD 780
Y CEC G+ G RC K+
Sbjct: 49 YKCECPTGFSGKRCHIKE 66
>U40420-1|AAA81430.1| 2214|Caenorhabditis elegans Hypothetical
protein F40F4.6 protein.
Length = 2214
Score = 31.1 bits (67), Expect = 0.93
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 622 INVTFPTFKCEPEYSQYYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
+N + T C PE++ YC N +C+ + +C C GY G CE
Sbjct: 847 MNPSNTTCFCTPEFTGTYCQNI-ICYNGGTASGD--HCVCPPGYAGESCE 893
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 31.1 bits (67), Expect = 0.93
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
CLNGG C + S + +C C G+ G CE
Sbjct: 1804 CLNGGFC-SYANSNRSLPHCICPSGFTGDHCE 1834
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 646 KCE-PEYSQYYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
+C+ P YC N C I+ + C+C+ G+ G RCE
Sbjct: 1911 RCDVPVQCDDYCTNNSKC---TITNGTHFECDCKPGFKGLRCE 1950
Score = 31.1 bits (67), Expect = 0.93
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +1
Query: 637 PTFK---CEPEYSQYYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFK 777
P FK C + +CL+ G C T+ P CEC ++G RC+++
Sbjct: 2022 PGFKGLLCSSNACENFCLHDGNC-TLDEYFEP--QCECYQAFIGDRCQYR 2068
>Z81064-2|CAB02963.1| 259|Caenorhabditis elegans Hypothetical
protein F16B12.2 protein.
Length = 259
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +1
Query: 673 YCLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFK 777
YC N GVC V I C C G+ G CE K
Sbjct: 180 YCQNKGVCSFV----DGISRCRCAVGFTGKHCERK 210
>Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical
protein C50H2.3 protein.
Length = 838
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Frame = +1
Query: 676 CLNGGVCFTVV----ISXSPIYNCECQXGYVGPRCE 771
CLNG C + P + C C G+ GP+C+
Sbjct: 600 CLNGATCQIKYNDDDVDEKPTFECFCAAGFGGPKCD 635
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
CLN G C T Y CEC G+ G C+
Sbjct: 644 CLNNGTCRTT--KGYSTYFCECANGFGGKNCD 673
>U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical
protein F28B4.3 protein.
Length = 2229
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 622 INVTFPTFKCEPEYSQYYCLNGGVCFTV-VISXSPIYNCECQXGYVGPRCE 771
+N T T C P+++ YC N VC+ +S C C GY G CE
Sbjct: 850 MNPTNTTCFCTPQFTGTYCQNI-VCYNGGTVSGG---QCVCPPGYAGESCE 896
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C NGGVC S +C C GY+G +CE
Sbjct: 1345 CENGGVC------DSSTGSCVCPPGYIGTKCE 1370
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/44 (27%), Positives = 18/44 (40%)
Frame = +1
Query: 646 KCEPEYSQYYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFK 777
+C P C N CF + C C G++GP C+ +
Sbjct: 1585 ECRPGRYGQSCQNKCQCFNGATCDARTGQCSCSPGWLGPTCQIE 1628
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C NGG C + + C+C GY G +CE
Sbjct: 594 CQNGGKCS--MRGSGLLSKCDCPSGYTGEKCE 623
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCEF 774
C++GG C +CEC G+ GP CEF
Sbjct: 1130 CMHGGEC------NKENGDCECIDGWTGPSCEF 1156
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCEF 774
C NGG C + + CEC G+ G +C++
Sbjct: 84 CHNGGTCVPSEHNDNEQV-CECPVGFTGAKCQY 115
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C NGGVC S +C C GY+G +CE
Sbjct: 1345 CENGGVC------DSSTGSCVCPPGYIGTKCE 1370
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/44 (27%), Positives = 18/44 (40%)
Frame = +1
Query: 646 KCEPEYSQYYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFK 777
+C P C N CF + C C G++GP C+ +
Sbjct: 1585 ECRPGRYGQSCQNKCQCFNGATCDARTGQCSCSPGWLGPTCQIE 1628
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C NGG C + + C+C GY G +CE
Sbjct: 594 CQNGGKCS--MRGSGLLSKCDCPSGYTGEKCE 623
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCEF 774
C++GG C +CEC G+ GP CEF
Sbjct: 1130 CMHGGEC------NKENGDCECIDGWTGPSCEF 1156
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCEF 774
C NGG C + + CEC G+ G +C++
Sbjct: 84 CHNGGTCVPSEHNDNEQV-CECPVGFTGAKCQY 115
>Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical
protein Y69H2.12 protein.
Length = 528
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C+NG C T V + Y C C G+ G C+
Sbjct: 445 CVNGD-CQTTVDGITTNYTCTCDSGWTGENCD 475
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFKD 780
C N G C T+V+ S Y C C + G RCE D
Sbjct: 171 CQNSGNC-TMVLENSN-YLCTCSPDWQGRRCEVAD 203
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFKDL 783
C NG +C V+ Y C C GY G C++ D+
Sbjct: 368 CWNG-IC--VLNEQYNTYTCACDDGYFGDLCQYPDV 400
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFKDL 783
C +G C + S + Y+C C G CE+ +L
Sbjct: 130 CRSGATCVSSNSSATTEYSCICTDQQFGTHCEYDNL 165
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 631 TFPTFKCEPEYSQYYCLNGGVCFTVVISXSPIYNCECQ-XGYVGPRCE 771
T P ++ P C N GVC + +P + CEC+ G G RC+
Sbjct: 2240 TCPVWRAPPACQHSLCHNDGVCH----NTNPGFFCECRNDGLKGARCQ 2283
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 631 TFPTFKCEPEYSQYYCLNGGVCFTVVISXSPIYNCECQ-XGYVGPRCE 771
T P ++ P C N GVC + +P + CEC+ G G RC+
Sbjct: 2240 TCPVWRAPPACQHSLCHNDGVCH----NTNPGFFCECRNDGLKGARCQ 2283
>Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical
protein W02B9.1a protein.
Length = 1223
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 631 TFPTFKCEPEYSQYYCLNGGVCFTVVISXSPIYNCECQ-XGYVGPRCE 771
T P ++ P C N GVC + +P + CEC+ G G RC+
Sbjct: 543 TCPVWRAPPACQHSLCHNDGVCH----NTNPGFFCECRNDGLKGARCQ 586
>Z81482-4|CAB03958.1| 104|Caenorhabditis elegans Hypothetical
protein C40H5.7 protein.
Length = 104
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFK 777
C N G C +++ S Y CEC ++G +CE++
Sbjct: 38 CWNEGKC---LLNGSSNYFCECPPAFIGFQCEYR 68
>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical protein
F15B9.7 protein.
Length = 2577
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = +1
Query: 649 CEPEYSQYY---CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C+ + Y C N C ++ Y CEC+ G++G CE
Sbjct: 1248 CDTRIDECYRGRCSNNSTC----VAFENTYQCECKPGWIGRHCE 1287
>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = +1
Query: 649 CEPEYSQYY---CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C+ + Y C N C ++ Y CEC+ G++G CE
Sbjct: 1248 CDTRIDECYRGRCSNNSTC----VAFENTYQCECKPGWIGRHCE 1287
>U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
CLN G C T Y CEC G+ G C+
Sbjct: 644 CLNNGTCRTT--KGYSTYFCECANGFGGKNCD 673
>U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
CLN G C T Y CEC G+ G C+
Sbjct: 644 CLNNGTCRTT--KGYSTYFCECANGFGGKNCD 673
>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
protein FMI-1 protein.
Length = 2596
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = +1
Query: 649 CEPEYSQYY---CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C+ + Y C N C ++ Y CEC+ G++G CE
Sbjct: 1248 CDTRIDECYRGRCSNNSTC----VAFENTYQCECKPGWIGRHCE 1287
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 631 TFPTFKCEPEYSQYYCLNGGVCFTVVISXSPIYNCECQ-XGYVGPRCE 771
T P ++ P C N GVC + +P + CEC+ G G RC+
Sbjct: 2240 TCPVWRAPPACQHSLCHNDGVCH----NTNPGFFCECRNDGLKGARCQ 2283
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 637 PTFKCEPEYSQYYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
PT P + + C N G C ++S C C+ G+ G RCE
Sbjct: 217 PTLPPSP-CANHECHNNGTC---LVSQEGAATCLCRNGFTGDRCE 257
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 646 KCEPEY-SQYYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
+CE + S C NGGVC S + I CEC + G CE
Sbjct: 255 RCELDVCSSVPCQNGGVCR----SNNGIAYCECPPAFTGLLCE 293
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 637 PTFKCEPEYSQYYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
PT P + + C N G C ++S C C+ G+ G RCE
Sbjct: 217 PTLPPSP-CANHECHNNGTC---LVSQEGAATCLCRNGFTGDRCE 257
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 646 KCEPEY-SQYYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
+CE + S C NGGVC S + I CEC + G CE
Sbjct: 255 RCELDVCSSVPCQNGGVCR----SNNGIAYCECPPAFTGLLCE 293
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 631 TFPTFKCEPEYSQYYCLNGGVCFTVVISXSPIYNCECQ-XGYVGPRCE 771
T P ++ P C N GVC + +P + CEC+ G G RC+
Sbjct: 2240 TCPVWRAPPACQHSLCHNDGVCH----NTNPGFFCECRNDGLKGARCQ 2283
>AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein.
Length = 1223
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 631 TFPTFKCEPEYSQYYCLNGGVCFTVVISXSPIYNCECQ-XGYVGPRCE 771
T P ++ P C N GVC + +P + CEC+ G G RC+
Sbjct: 543 TCPVWRAPPACQHSLCHNDGVCH----NTNPGFFCECRNDGLKGARCQ 586
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 637 PTFKCEPEYSQYYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
PT P + + C N G C ++S C C+ G+ G RCE
Sbjct: 217 PTLPPSP-CANHECHNNGTC---LVSQEGAATCLCRNGFTGDRCE 257
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 646 KCEPEY-SQYYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
+CE + S C NGGVC S + I CEC + G CE
Sbjct: 255 RCELDVCSSVPCQNGGVCR----SNNGIAYCECPPAFTGLLCE 293
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 637 PTFKCEPEYSQYYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
PT P + + C N G C ++S C C+ G+ G RCE
Sbjct: 217 PTLPPSP-CANHECHNNGTC---LVSQEGAATCLCRNGFTGDRCE 257
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 646 KCEPEY-SQYYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
+CE + S C NGGVC S + I CEC + G CE
Sbjct: 255 RCELDVCSSVPCQNGGVCR----SNNGIAYCECPPAFTGLLCE 293
>Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical
protein Y69H2.11 protein.
Length = 887
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFKD 780
C N G C VV + + I C C G+ G RCE D
Sbjct: 110 CQNNGNCSMVVDNANWI--CSCPPGWQGRRCETPD 142
Score = 28.7 bits (61), Expect = 5.0
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = +1
Query: 682 NGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
N G C + + + Y C C G+ G C+
Sbjct: 384 NNGKCASTIDGITTNYTCTCDDGWTGTNCD 413
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCEFKDL 783
CLNG C V+ + C C G+ G +C++ D+
Sbjct: 306 CLNG-TC--VLNDQYNKFTCVCDDGFFGDKCQYSDI 338
>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical
protein ZC116.3 protein.
Length = 3871
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C+N G C + Y CEC+ G++G CE
Sbjct: 352 CVNAGKCKP---TSDTEYKCECEAGFLGKFCE 380
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCEF 774
C N G C I+ + C+CQ GY G C++
Sbjct: 126 CQNNGTC----INNRGGFECQCQSGYHGSLCQY 154
>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical
protein ZC116.3 protein.
Length = 3871
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C+N G C + Y CEC+ G++G CE
Sbjct: 352 CVNAGKCKP---TSDTEYKCECEAGFLGKFCE 380
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCEF 774
C N G C I+ + C+CQ GY G C++
Sbjct: 126 CQNNGTC----INNRGGFECQCQSGYHGSLCQY 154
>X77495-1|CAA54629.1| 402|Caenorhabditis elegans lag-2 protein.
Length = 402
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
CLNG CF P C C G++G CE
Sbjct: 239 CLNGAKCFP----NGPKVFCSCAVGFIGEFCE 266
>AL032660-1|CAA21752.1| 711|Caenorhabditis elegans Hypothetical
protein Y70G10A.2 protein.
Length = 711
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +1
Query: 649 CEPEYSQYYCLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
C PE C GVC + + S C+C GY G RCE
Sbjct: 168 CTPEA----CGKNGVCTSELAEVS----CKCNWGYAGDRCE 200
>AC024205-1|AAF36047.1| 402|Caenorhabditis elegans Lin-12 and glp-1
phenotype protein2 protein.
Length = 402
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 676 CLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
CLNG CF P C C G++G CE
Sbjct: 239 CLNGAKCFP----NGPKVFCSCAVGFIGEFCE 266
>Z70754-3|CAA94773.1| 293|Caenorhabditis elegans Hypothetical
protein F58E6.3 protein.
Length = 293
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 673 YCLNGGVCFTVVISXSPIYNCECQXGYVGPRCE 771
+CLNGG C + C C G+ G RC+
Sbjct: 261 FCLNGGSCLKTGRGET---KCLCASGFAGKRCQ 290
>U61950-6|AAC24291.1| 528|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 46, isoform a protein.
Length = 528
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +2
Query: 200 VFDFSLSTCSSRDRCDISGARINRAXXXXXXXXXXXXXHRKHVRADRQR 346
VF+ + CS+ + CDI+ NR + KHVR +R +
Sbjct: 127 VFEGRVYMCSADNHCDITNESRNRCRACRLRNCLEGGMNPKHVREERSK 175
>U61950-5|AAL02466.1| 576|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 46, isoform b protein.
Length = 576
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +2
Query: 200 VFDFSLSTCSSRDRCDISGARINRAXXXXXXXXXXXXXHRKHVRADRQR 346
VF+ + CS+ + CDI+ NR + KHVR +R +
Sbjct: 175 VFEGRVYMCSADNHCDITNESRNRCRACRLRNCLEGGMNPKHVREERSK 223
>AF273791-1|AAG15139.1| 525|Caenorhabditis elegans nuclear receptor
NHR-46 protein.
Length = 525
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +2
Query: 200 VFDFSLSTCSSRDRCDISGARINRAXXXXXXXXXXXXXHRKHVRADRQR 346
VF+ + CS+ + CDI+ NR + KHVR +R +
Sbjct: 124 VFEGRVYMCSADNHCDITNESRNRCRACRLRNCLEGGMNPKHVREERSK 172
>AF273790-1|AAG15138.1| 534|Caenorhabditis elegans nuclear receptor
NHR-46 protein.
Length = 534
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +2
Query: 200 VFDFSLSTCSSRDRCDISGARINRAXXXXXXXXXXXXXHRKHVRADRQR 346
VF+ + CS+ + CDI+ NR + KHVR +R +
Sbjct: 133 VFEGRVYMCSADNHCDITNESRNRCRACRLRNCLEGGMNPKHVREERSK 181
>AF273787-1|AAG15135.1| 527|Caenorhabditis elegans nuclear receptor
NHR-46 protein.
Length = 527
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +2
Query: 200 VFDFSLSTCSSRDRCDISGARINRAXXXXXXXXXXXXXHRKHVRADRQR 346
VF+ + CS+ + CDI+ NR + KHVR +R +
Sbjct: 126 VFEGRVYMCSADNHCDITNESRNRCRACRLRNCLEGGMNPKHVREERSK 174
>Z69883-4|CAA93742.2| 480|Caenorhabditis elegans Hypothetical
protein C27C12.5 protein.
Length = 480
Score = 27.9 bits (59), Expect = 8.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1
Query: 174 WRSFKTQTLNVPFEKLYT 121
WR F+T TL + +K+YT
Sbjct: 184 WREFETNTLKIKLKKMYT 201
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,819,381
Number of Sequences: 27780
Number of extensions: 311816
Number of successful extensions: 1556
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1539
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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