Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_A16
(466 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC011758-1|AAH11758.2| 475|Homo sapiens prolyl-tRNA synthetase ... 64 2e-10
BC007956-1|AAH07956.2| 475|Homo sapiens prolyl-tRNA synthetase ... 64 2e-10
AL139244-7|CAI18996.1| 475|Homo sapiens prolyl-tRNA synthetase ... 64 2e-10
AK025585-1|BAB15178.1| 402|Homo sapiens protein ( Homo sapiens ... 60 5e-09
AF006061-1|AAB71829.1| 245|Homo sapiens placental growth hormon... 29 6.0
>BC011758-1|AAH11758.2| 475|Homo sapiens prolyl-tRNA synthetase 2,
mitochondrial (putative) protein.
Length = 475
Score = 64.1 bits (149), Expect = 2e-10
Identities = 27/69 (39%), Positives = 47/69 (68%)
Frame = +3
Query: 9 EITCKSQKLLXECGLVRPTTSGFFTLLPXARRALDKLENLIKTCIESSGAQRLSLPALTS 188
++TCKSQ+L+ + GL+ P + G + LLP RA++KL +I +++ G Q++++P+L+
Sbjct: 65 DLTCKSQRLMLQVGLIYPASPGCYHLLPYTVRAMEKLVRVIDQEMQAIGGQKVNMPSLSP 124
Query: 189 AGLWAKTGR 215
A LW T R
Sbjct: 125 AELWQATNR 133
Score = 59.7 bits (138), Expect = 5e-09
Identities = 24/43 (55%), Positives = 32/43 (74%)
Frame = +1
Query: 253 DRHNKKYLLAPTYEEAIAELLSDLKPISYKQLPIILYQIXNKY 381
DRH K+Y L PT+EEAI L++ K +SYKQLP +LYQ+ K+
Sbjct: 146 DRHGKEYCLGPTHEEAITALIASQKKLSYKQLPFLLYQVTRKF 188
Score = 31.9 bits (69), Expect = 1.1
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +2
Query: 386 DELRPKHGLLRAREFSMLDAY 448
DE RP+ GLLR REF M D Y
Sbjct: 190 DEPRPRFGLLRGREFYMKDMY 210
>BC007956-1|AAH07956.2| 475|Homo sapiens prolyl-tRNA synthetase 2,
mitochondrial (putative) protein.
Length = 475
Score = 64.1 bits (149), Expect = 2e-10
Identities = 27/69 (39%), Positives = 47/69 (68%)
Frame = +3
Query: 9 EITCKSQKLLXECGLVRPTTSGFFTLLPXARRALDKLENLIKTCIESSGAQRLSLPALTS 188
++TCKSQ+L+ + GL+ P + G + LLP RA++KL +I +++ G Q++++P+L+
Sbjct: 65 DLTCKSQRLMLQVGLIYPASPGCYHLLPYTVRAMEKLVRVIDQEMQAIGGQKVNMPSLSP 124
Query: 189 AGLWAKTGR 215
A LW T R
Sbjct: 125 AELWQATNR 133
Score = 59.7 bits (138), Expect = 5e-09
Identities = 24/43 (55%), Positives = 32/43 (74%)
Frame = +1
Query: 253 DRHNKKYLLAPTYEEAIAELLSDLKPISYKQLPIILYQIXNKY 381
DRH K+Y L PT+EEAI L++ K +SYKQLP +LYQ+ K+
Sbjct: 146 DRHGKEYCLGPTHEEAITALIASQKKLSYKQLPFLLYQVTRKF 188
Score = 31.9 bits (69), Expect = 1.1
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +2
Query: 386 DELRPKHGLLRAREFSMLDAY 448
DE RP+ GLLR REF M D Y
Sbjct: 190 DEPRPRFGLLRGREFYMKDMY 210
>AL139244-7|CAI18996.1| 475|Homo sapiens prolyl-tRNA synthetase 2,
mitochondrial (putative) protein.
Length = 475
Score = 64.1 bits (149), Expect = 2e-10
Identities = 27/69 (39%), Positives = 47/69 (68%)
Frame = +3
Query: 9 EITCKSQKLLXECGLVRPTTSGFFTLLPXARRALDKLENLIKTCIESSGAQRLSLPALTS 188
++TCKSQ+L+ + GL+ P + G + LLP RA++KL +I +++ G Q++++P+L+
Sbjct: 65 DLTCKSQRLMLQVGLIYPASPGCYHLLPYTVRAMEKLVRVIDQEMQAIGGQKVNMPSLSP 124
Query: 189 AGLWAKTGR 215
A LW T R
Sbjct: 125 AELWQATNR 133
Score = 59.7 bits (138), Expect = 5e-09
Identities = 24/43 (55%), Positives = 32/43 (74%)
Frame = +1
Query: 253 DRHNKKYLLAPTYEEAIAELLSDLKPISYKQLPIILYQIXNKY 381
DRH K+Y L PT+EEAI L++ K +SYKQLP +LYQ+ K+
Sbjct: 146 DRHGKEYCLGPTHEEAITALIASQKKLSYKQLPFLLYQVTRKF 188
Score = 31.9 bits (69), Expect = 1.1
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +2
Query: 386 DELRPKHGLLRAREFSMLDAY 448
DE RP+ GLLR REF M D Y
Sbjct: 190 DEPRPRFGLLRGREFYMKDMY 210
>AK025585-1|BAB15178.1| 402|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21932 fis, clone HEP04318. ).
Length = 402
Score = 59.7 bits (138), Expect = 5e-09
Identities = 24/43 (55%), Positives = 32/43 (74%)
Frame = +1
Query: 253 DRHNKKYLLAPTYEEAIAELLSDLKPISYKQLPIILYQIXNKY 381
DRH K+Y L PT+EEAI L++ K +SYKQLP +LYQ+ K+
Sbjct: 73 DRHGKEYCLGPTHEEAITALIASQKKLSYKQLPFLLYQVTRKF 115
Score = 48.8 bits (111), Expect = 9e-06
Identities = 21/60 (35%), Positives = 38/60 (63%)
Frame = +3
Query: 36 LXECGLVRPTTSGFFTLLPXARRALDKLENLIKTCIESSGAQRLSLPALTSAGLWAKTGR 215
+ + GL+ P + G + LLP RA++KL +I +++ G Q++++P+L+ A LW T R
Sbjct: 1 MLQVGLIYPASPGCYHLLPYTVRAMEKLVRVIDQEMQAIGGQKVNMPSLSPAELWQATNR 60
Score = 31.9 bits (69), Expect = 1.1
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +2
Query: 386 DELRPKHGLLRAREFSMLDAY 448
DE RP+ GLLR REF M D Y
Sbjct: 117 DEPRPRFGLLRGREFYMKDMY 137
>AF006061-1|AAB71829.1| 245|Homo sapiens placental growth hormone
isoform hGH-V3 protein.
Length = 245
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 387 TNCGRNTGCSGRGSSRCWTRTERT 458
T+C R TGCS S R WTR+ +
Sbjct: 179 THCSRTTGCS-TASGRTWTRSRHS 201
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,308,033
Number of Sequences: 237096
Number of extensions: 1084176
Number of successful extensions: 2552
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2552
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3986009860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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