Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_A16
         (466 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-498|AAF47674.1|  458|Drosophila melanogaster CG12186-PA...    73   1e-13
BT003289-1|AAO25049.1|  458|Drosophila melanogaster GM03563p pro...    72   4e-13
BT010320-1|AAQ23638.1|  335|Drosophila melanogaster AT04665p pro...    30   1.3  

>AE014296-498|AAF47674.1|  458|Drosophila melanogaster CG12186-PA
           protein.
          Length = 458

 Score = 73.3 bits (172), Expect = 1e-13
 Identities = 32/71 (45%), Positives = 52/71 (73%)
 Frame = +3

Query: 6   TEITCKSQKLLXECGLVRPTTSGFFTLLPXARRALDKLENLIKTCIESSGAQRLSLPALT 185
           TE   +SQKLL E GLV+  ++G + ++P A+R++DK  +L+++ ++ +G Q+++LP LT
Sbjct: 23  TEQLSRSQKLLTELGLVKSGSNGTYQIMPMAQRSVDKCIDLVQSNMQQAGGQKITLPILT 82

Query: 186 SAGLWAKTGRL 218
             GLW KTGRL
Sbjct: 83  PTGLWKKTGRL 93



 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 21/43 (48%), Positives = 33/43 (76%)
 Frame = +1

Query: 253 DRHNKKYLLAPTYEEAIAELLSDLKPISYKQLPIILYQIXNKY 381
           DR  K++L++PT+EEA+  +L+   PISY+QLP+ L+QI  K+
Sbjct: 105 DRSGKQFLMSPTHEEAVTAMLATTSPISYRQLPLRLFQIGPKF 147



 Score = 30.3 bits (65), Expect = 1.3
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 386 DELRPKHGLLRAREFSMLDAYGAHAS 463
           DEL+ + GL+RA+EF M D Y    S
Sbjct: 149 DELKTRFGLMRAKEFLMKDMYSFDVS 174


>BT003289-1|AAO25049.1|  458|Drosophila melanogaster GM03563p
           protein.
          Length = 458

 Score = 71.7 bits (168), Expect = 4e-13
 Identities = 31/71 (43%), Positives = 51/71 (71%)
 Frame = +3

Query: 6   TEITCKSQKLLXECGLVRPTTSGFFTLLPXARRALDKLENLIKTCIESSGAQRLSLPALT 185
           TE   +SQKLL E G V+  ++G + ++P A+R++DK  +L+++ ++ +G Q+++LP LT
Sbjct: 23  TEQLSRSQKLLTELGFVKSGSNGTYQIMPMAQRSVDKCIDLVQSNMQQAGGQKITLPILT 82

Query: 186 SAGLWAKTGRL 218
             GLW KTGRL
Sbjct: 83  PTGLWKKTGRL 93



 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 21/43 (48%), Positives = 33/43 (76%)
 Frame = +1

Query: 253 DRHNKKYLLAPTYEEAIAELLSDLKPISYKQLPIILYQIXNKY 381
           DR  K++L++PT+EEA+  +L+   PISY+QLP+ L+QI  K+
Sbjct: 105 DRSGKQFLMSPTHEEAVTAMLATTSPISYRQLPLRLFQIGPKF 147



 Score = 30.3 bits (65), Expect = 1.3
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 386 DELRPKHGLLRAREFSMLDAYGAHAS 463
           DEL+ + GL+RA+EF M D Y    S
Sbjct: 149 DELKTRFGLMRAKEFLMKDMYSFDVS 174


>BT010320-1|AAQ23638.1|  335|Drosophila melanogaster AT04665p
           protein.
          Length = 335

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +1

Query: 310 LLSDLKPISYKQLPIILYQIXNKY 381
           +L+   PISY+QLP+ L+QI  K+
Sbjct: 1   MLATTSPISYRQLPLRLFQIGPKF 24



 Score = 30.3 bits (65), Expect = 1.3
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 386 DELRPKHGLLRAREFSMLDAYGAHAS 463
           DEL+ + GL+RA+EF M D Y    S
Sbjct: 26  DELKTRFGLMRAKEFLMKDMYSFDVS 51


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,220,106
Number of Sequences: 53049
Number of extensions: 354921
Number of successful extensions: 823
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1559812275
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)