Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_A14
         (487 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81143-1|CAB03513.1|  381|Caenorhabditis elegans Hypothetical pr...    28   3.1  
Z67882-6|CAA91804.1|  406|Caenorhabditis elegans Hypothetical pr...    27   5.5  
Z50797-10|CAA90677.1|  406|Caenorhabditis elegans Hypothetical p...    27   5.5  
AF040644-5|AAD34647.1| 1032|Caenorhabditis elegans Hypothetical ...    27   5.5  
AC006610-3|AAK85449.1|  264|Caenorhabditis elegans Hypothetical ...    27   7.2  
Z77662-16|CAJ90504.1|  424|Caenorhabditis elegans Hypothetical p...    27   9.5  
AL033512-5|CAA22073.2|  424|Caenorhabditis elegans Hypothetical ...    27   9.5  

>Z81143-1|CAB03513.1|  381|Caenorhabditis elegans Hypothetical
           protein ZK265.2 protein.
          Length = 381

 Score = 28.3 bits (60), Expect = 3.1
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +1

Query: 175 LVPPVISPYASPAAVPITYSALPSATYYVR*NKIISRHL 291
           + PP +  Y SPA V   + A P+A  Y R  K+   H+
Sbjct: 343 VAPPKLHDYESPAPVADAHDAAPAAQPYKR-RKVARAHM 380


>Z67882-6|CAA91804.1|  406|Caenorhabditis elegans Hypothetical
           protein F22E10.5 protein.
          Length = 406

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 16/45 (35%), Positives = 19/45 (42%)
 Frame = +3

Query: 51  NSSFSSLCWPCLWPLQALRQPQSPAPQLLPYTGLVLRLYTRLSTS 185
           NS    LC    W       P   AP L+ + GLV+ L T L  S
Sbjct: 41  NSWLDELCMKRWWEFVITLCPMWIAPNLITWIGLVINLITVLVLS 85


>Z50797-10|CAA90677.1|  406|Caenorhabditis elegans Hypothetical
           protein F22E10.5 protein.
          Length = 406

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 16/45 (35%), Positives = 19/45 (42%)
 Frame = +3

Query: 51  NSSFSSLCWPCLWPLQALRQPQSPAPQLLPYTGLVLRLYTRLSTS 185
           NS    LC    W       P   AP L+ + GLV+ L T L  S
Sbjct: 41  NSWLDELCMKRWWEFVITLCPMWIAPNLITWIGLVINLITVLVLS 85


>AF040644-5|AAD34647.1| 1032|Caenorhabditis elegans Hypothetical
           protein H04J21.1 protein.
          Length = 1032

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 7   LQSLXLPRNKQHVQQILRFLRSVGRVSGRSK 99
           L+SL L +NK+HV  +   ++ V   S   K
Sbjct: 541 LKSLKLDKNKKHVDAVFEIVKDVNSTSANEK 571


>AC006610-3|AAK85449.1|  264|Caenorhabditis elegans Hypothetical
           protein C30F12.3 protein.
          Length = 264

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 106 LRAWSGQRHGQQSEENEEFVGHVVCCE 26
           +R WSG RH +QS ++E     +  CE
Sbjct: 4   IRKWSGSRHNRQSLQSEATTCIISECE 30


>Z77662-16|CAJ90504.1|  424|Caenorhabditis elegans Hypothetical
           protein Y49A3A.1 protein.
          Length = 424

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 16/44 (36%), Positives = 18/44 (40%)
 Frame = +3

Query: 54  SSFSSLCWPCLWPLQALRQPQSPAPQLLPYTGLVLRLYTRLSTS 185
           S    LC    W    L  P   AP LL   GL++ L T L  S
Sbjct: 72  SWLDELCMKKFWEAVVLYYPLWVAPNLLTLIGLIVNLTTVLVLS 115


>AL033512-5|CAA22073.2|  424|Caenorhabditis elegans Hypothetical
           protein Y49A3A.1 protein.
          Length = 424

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 16/44 (36%), Positives = 18/44 (40%)
 Frame = +3

Query: 54  SSFSSLCWPCLWPLQALRQPQSPAPQLLPYTGLVLRLYTRLSTS 185
           S    LC    W    L  P   AP LL   GL++ L T L  S
Sbjct: 72  SWLDELCMKKFWEAVVLYYPLWVAPNLLTLIGLIVNLTTVLVLS 115


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,399,866
Number of Sequences: 27780
Number of extensions: 136095
Number of successful extensions: 447
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)