Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_A12
(877 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D26067-1|BAA05062.1| 335|Homo sapiens KIAA0033 protein. 233 5e-61
BC091524-1|AAH91524.1| 291|Homo sapiens transmembrane protein 4... 233 5e-61
BC019884-1|AAH19884.1| 264|Homo sapiens transmembrane protein 4... 138 2e-32
BC008043-1|AAH08043.1| 264|Homo sapiens transmembrane protein 4... 138 2e-32
AY358547-1|AAQ88911.1| 264|Homo sapiens RPLL168 protein. 138 2e-32
BC044597-1|AAH44597.1| 192|Homo sapiens TMEM41B protein protein. 50 1e-05
BC035034-1|AAH35034.1| 192|Homo sapiens TMEM41B protein protein. 50 1e-05
AK172748-1|BAD18735.1| 132|Homo sapiens protein ( Homo sapiens ... 33 1.0
>D26067-1|BAA05062.1| 335|Homo sapiens KIAA0033 protein.
Length = 335
Score = 233 bits (571), Expect = 5e-61
Identities = 104/177 (58%), Positives = 134/177 (75%)
Frame = +2
Query: 308 YRQFPXXXXXXXXXXXXPWDLEDAKQLGLVLDRYKDRYFYEVLFGVFLVYIFLQTFAIPG 487
Y+ FP P D++DAK LG VL +YKD ++ +VL F YIFLQTFAIPG
Sbjct: 116 YKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFATYIFLQTFAIPG 175
Query: 488 SIFLSILSGFLFPFYFALVLVCCCSAIGASLCFFLSNLLGKKLVRKFFPERAAEWSKAVA 667
SIFLSILSGFL+PF AL LVC CS +GAS C+ LS L+G+ +V K+ E+A +WS+ V
Sbjct: 176 SIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLTEKAVKWSQQVE 235
Query: 668 KHKDNLLNYIVFLRVTPFLPNWFINMSAPVIGVPLVPFALGTFIGVAPPSFVAIQAG 838
+H+++L+NYI+FLR+TPFLPNWFIN+++PVI VPL F +GTF+GVAPPSFVAI+AG
Sbjct: 236 RHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPPSFVAIKAG 292
>BC091524-1|AAH91524.1| 291|Homo sapiens transmembrane protein 41B
protein.
Length = 291
Score = 233 bits (571), Expect = 5e-61
Identities = 104/177 (58%), Positives = 134/177 (75%)
Frame = +2
Query: 308 YRQFPXXXXXXXXXXXXPWDLEDAKQLGLVLDRYKDRYFYEVLFGVFLVYIFLQTFAIPG 487
Y+ FP P D++DAK LG VL +YKD ++ +VL F YIFLQTFAIPG
Sbjct: 72 YKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFATYIFLQTFAIPG 131
Query: 488 SIFLSILSGFLFPFYFALVLVCCCSAIGASLCFFLSNLLGKKLVRKFFPERAAEWSKAVA 667
SIFLSILSGFL+PF AL LVC CS +GAS C+ LS L+G+ +V K+ E+A +WS+ V
Sbjct: 132 SIFLSILSGFLYPFPLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLTEKAVKWSQQVE 191
Query: 668 KHKDNLLNYIVFLRVTPFLPNWFINMSAPVIGVPLVPFALGTFIGVAPPSFVAIQAG 838
+H+++L+NYI+FLR+TPFLPNWFIN+++PVI VPL F +GTF+GVAPPSFVAI+AG
Sbjct: 192 RHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPPSFVAIKAG 248
>BC019884-1|AAH19884.1| 264|Homo sapiens transmembrane protein 41A
protein.
Length = 264
Score = 138 bits (335), Expect = 2e-32
Identities = 60/160 (37%), Positives = 103/160 (64%)
Frame = +2
Query: 359 PWDLEDAKQLGLVLDRYKDRYFYEVLFGVFLVYIFLQTFAIPGSIFLSILSGFLFPFYFA 538
P DL + ++L VL Y+ + V Y++ Q FAIPGS FL++L+G LF +
Sbjct: 45 PSDLAELRELSEVLREYRKEHQAYVFLLFCGAYLYKQGFAIPGSSFLNVLAGALFGPWLG 104
Query: 539 LVLVCCCSAIGASLCFFLSNLLGKKLVRKFFPERAAEWSKAVAKHKDNLLNYIVFLRVTP 718
L+L C +++GA+ C+ LS++ GK+LV +FP++ A + V +++++L +++FLR+ P
Sbjct: 105 LLLCCVLTSVGATCCYLLSSIFGKQLVVSYFPDKVALLQRKVEENRNSLFFFLLFLRLFP 164
Query: 719 FLPNWFINMSAPVIGVPLVPFALGTFIGVAPPSFVAIQAG 838
PNWF+N+SAP++ +P+V F IG+ P +F+ +Q G
Sbjct: 165 MTPNWFLNLSAPILNIPIVQFFFSVLIGLIPYNFICVQTG 204
>BC008043-1|AAH08043.1| 264|Homo sapiens transmembrane protein 41A
protein.
Length = 264
Score = 138 bits (335), Expect = 2e-32
Identities = 60/160 (37%), Positives = 103/160 (64%)
Frame = +2
Query: 359 PWDLEDAKQLGLVLDRYKDRYFYEVLFGVFLVYIFLQTFAIPGSIFLSILSGFLFPFYFA 538
P DL + ++L VL Y+ + V Y++ Q FAIPGS FL++L+G LF +
Sbjct: 45 PSDLAELRELSEVLREYRKEHQAYVFLLFCGAYLYKQGFAIPGSSFLNVLAGALFGPWLG 104
Query: 539 LVLVCCCSAIGASLCFFLSNLLGKKLVRKFFPERAAEWSKAVAKHKDNLLNYIVFLRVTP 718
L+L C +++GA+ C+ LS++ GK+LV +FP++ A + V +++++L +++FLR+ P
Sbjct: 105 LLLCCVLTSVGATCCYLLSSIFGKQLVVSYFPDKVALLQRKVEENRNSLFFFLLFLRLFP 164
Query: 719 FLPNWFINMSAPVIGVPLVPFALGTFIGVAPPSFVAIQAG 838
PNWF+N+SAP++ +P+V F IG+ P +F+ +Q G
Sbjct: 165 MTPNWFLNLSAPILNIPIVQFFFSVLIGLIPYNFICVQTG 204
>AY358547-1|AAQ88911.1| 264|Homo sapiens RPLL168 protein.
Length = 264
Score = 138 bits (335), Expect = 2e-32
Identities = 60/160 (37%), Positives = 103/160 (64%)
Frame = +2
Query: 359 PWDLEDAKQLGLVLDRYKDRYFYEVLFGVFLVYIFLQTFAIPGSIFLSILSGFLFPFYFA 538
P DL + ++L VL Y+ + V Y++ Q FAIPGS FL++L+G LF +
Sbjct: 45 PSDLAELRELSEVLREYRKEHQAYVFLLFCGAYLYKQGFAIPGSSFLNVLAGALFGPWLG 104
Query: 539 LVLVCCCSAIGASLCFFLSNLLGKKLVRKFFPERAAEWSKAVAKHKDNLLNYIVFLRVTP 718
L+L C +++GA+ C+ LS++ GK+LV +FP++ A + V +++++L +++FLR+ P
Sbjct: 105 LLLCCVLTSVGATCCYLLSSIFGKQLVVSYFPDKVALLQRKVEENRNSLFFFLLFLRLFP 164
Query: 719 FLPNWFINMSAPVIGVPLVPFALGTFIGVAPPSFVAIQAG 838
PNWF+N+SAP++ +P+V F IG+ P +F+ +Q G
Sbjct: 165 MTPNWFLNLSAPILNIPIVQFFFSVLIGLIPYNFICVQTG 204
>BC044597-1|AAH44597.1| 192|Homo sapiens TMEM41B protein protein.
Length = 192
Score = 49.6 bits (113), Expect = 1e-05
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = +2
Query: 308 YRQFPXXXXXXXXXXXXPWDLEDAKQLGLVLDRYKDRYFYEVLFGVFLVYIFLQ 469
Y+ FP P D++DAK LG VL +YKD ++ +VL F YIF Q
Sbjct: 72 YKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFATYIFYQ 125
Score = 47.6 bits (108), Expect = 6e-05
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +1
Query: 466 ANICNTWIYIFKYTFRVSFSFLFRTGISLLLFSNWCKSMFLLVKSSWKEAC*KILPRKSS 645
ANIC + +YI +YT RVS S L +F WC + SW+ +C +I R+SS
Sbjct: 127 ANICYSRLYISQYTLRVSLSLSTSLISCLFVFWTWCLFLLYAFLFSWETSCIQIPNRESS 186
Query: 646 RVV 654
++V
Sbjct: 187 KMV 189
>BC035034-1|AAH35034.1| 192|Homo sapiens TMEM41B protein protein.
Length = 192
Score = 49.6 bits (113), Expect = 1e-05
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = +2
Query: 308 YRQFPXXXXXXXXXXXXPWDLEDAKQLGLVLDRYKDRYFYEVLFGVFLVYIFLQ 469
Y+ FP P D++DAK LG VL +YKD ++ +VL F YIF Q
Sbjct: 72 YKNFPQLSEEERVNMKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFATYIFYQ 125
Score = 47.6 bits (108), Expect = 6e-05
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +1
Query: 466 ANICNTWIYIFKYTFRVSFSFLFRTGISLLLFSNWCKSMFLLVKSSWKEAC*KILPRKSS 645
ANIC + +YI +YT RVS S L +F WC + SW+ +C +I R+SS
Sbjct: 127 ANICYSRLYISQYTLRVSLSLSTSLISCLFVFWTWCLFLLYAFLFSWETSCIQIPNRESS 186
Query: 646 RVV 654
++V
Sbjct: 187 KMV 189
>AK172748-1|BAD18735.1| 132|Homo sapiens protein ( Homo sapiens
cDNA FLJ23909 fis, clone ADSU01856. ).
Length = 132
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +2
Query: 359 PWDLEDAKQLGLVLDRYKDRYFYEVLFGVFLVYIFLQTFAIPGSIFL 499
P DL + ++L VL Y+ + V Y++ Q FAIPGS FL
Sbjct: 45 PSDLAELRELSEVLREYRKEHQAYVFLLFCGAYLYKQGFAIPGSSFL 91
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,727,573
Number of Sequences: 237096
Number of extensions: 1946438
Number of successful extensions: 7923
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7921
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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