Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_A12
(877 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47808-6|CAA87776.1| 246|Caenorhabditis elegans Hypothetical pr... 227 6e-60
AL023853-2|CAA19559.3| 253|Caenorhabditis elegans Hypothetical ... 116 2e-26
Z77669-3|CAB01241.2| 259|Caenorhabditis elegans Hypothetical pr... 115 4e-26
Z73910-5|CAI79219.1| 124|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z82276-4|CAB05241.3| 327|Caenorhabditis elegans Hypothetical pr... 29 3.3
AC006664-1|AAF39902.2| 298|Caenorhabditis elegans Serpentine re... 29 3.3
AF024492-5|AAF98621.1| 334|Caenorhabditis elegans Serpentine re... 29 4.4
U28928-8|AAA68340.1| 661|Caenorhabditis elegans Peroxisomal mem... 28 7.6
AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical ... 28 7.6
>Z47808-6|CAA87776.1| 246|Caenorhabditis elegans Hypothetical
protein D2013.10 protein.
Length = 246
Score = 227 bits (556), Expect = 6e-60
Identities = 102/177 (57%), Positives = 132/177 (74%)
Frame = +2
Query: 308 YRQFPXXXXXXXXXXXXPWDLEDAKQLGLVLDRYKDRYFYEVLFGVFLVYIFLQTFAIPG 487
Y FP P +LEDAKQLG VL +YK+ + VL GV +VY+FLQ+FAIPG
Sbjct: 29 YSNFPEVSADEKVHLKYPRNLEDAKQLGRVLSKYKENNYSVVLCGVIVVYVFLQSFAIPG 88
Query: 488 SIFLSILSGFLFPFYFALVLVCCCSAIGASLCFFLSNLLGKKLVRKFFPERAAEWSKAVA 667
SIFL+ILSG+LFPFY A+VLVC CSA GA++C+ +S L G+ V + FPER A+W ++
Sbjct: 89 SIFLTILSGYLFPFYVAIVLVCSCSATGAAICYTISKLFGRSFVLQKFPERIAKWQDDLS 148
Query: 668 KHKDNLLNYIVFLRVTPFLPNWFINMSAPVIGVPLVPFALGTFIGVAPPSFVAIQAG 838
KH+D+ LNY++FLRVTP +PNW IN+++PV+ VPL PF GTF+GVAPPSF+ IQAG
Sbjct: 149 KHRDDFLNYMIFLRVTPIVPNWLINIASPVLDVPLAPFFWGTFLGVAPPSFLYIQAG 205
>AL023853-2|CAA19559.3| 253|Caenorhabditis elegans Hypothetical
protein Y71A12C.2 protein.
Length = 253
Score = 116 bits (280), Expect = 2e-26
Identities = 57/160 (35%), Positives = 91/160 (56%)
Frame = +2
Query: 359 PWDLEDAKQLGLVLDRYKDRYFYEVLFGVFLVYIFLQTFAIPGSIFLSILSGFLFPFYFA 538
P DLE ++L L +Y++ + + Y++ QTFAIPGS F+++L+G LF
Sbjct: 37 PRDLEGLRELSSSLTKYEESHAAYTVLLFSAAYLYKQTFAIPGSFFMNLLAGALFGTVRG 96
Query: 539 LVLVCCCSAIGASLCFFLSNLLGKKLVRKFFPERAAEWSKAVAKHKDNLLNYIVFLRVTP 718
+ LVC +A+GASLCF LS L +V +F R V +D L +++ R+ P
Sbjct: 97 VALVCSLNAVGASLCFCLSALFAAPIVDRFLKSRIESLRCLVNAERDRLWFFLLSARIFP 156
Query: 719 FLPNWFINMSAPVIGVPLVPFALGTFIGVAPPSFVAIQAG 838
F P+W +N+S+P + VPL A F+G+ P + + ++AG
Sbjct: 157 FTPHWLLNISSPFLDVPLRYHASSVFVGLFPYNLLCVRAG 196
>Z77669-3|CAB01241.2| 259|Caenorhabditis elegans Hypothetical
protein T07F10.4a protein.
Length = 259
Score = 115 bits (277), Expect = 4e-26
Identities = 48/149 (32%), Positives = 89/149 (59%)
Frame = +2
Query: 407 YKDRYFYEVLFGVFLVYIFLQTFAIPGSIFLSILSGFLFPFYFALVLVCCCSAIGASLCF 586
YK+ +F + Y++ QTFAIPGS L++++G ++ + +L CC + +G++LC+
Sbjct: 55 YKEDHFGYITTLFICAYLYKQTFAIPGSFLLNVIAGVVYDLWSGFILCCCLTTLGSTLCY 114
Query: 587 FLSNLLGKKLVRKFFPERAAEWSKAVAKHKDNLLNYIVFLRVTPFLPNWFINMSAPVIGV 766
S L G++ V +F ++ + + + + LL +++F R+ P P+W +N+ AP + +
Sbjct: 115 MFSELFGREYVFYYFGQKLTYLQQKIDDNSNRLLPFLLFARMFPISPSWLLNIVAPFLNI 174
Query: 767 PLVPFALGTFIGVAPPSFVAIQAGQPYIL 853
PL F + G+AP +F+ +QAG YIL
Sbjct: 175 PLPIFVVSALFGLAPYNFICVQAG--YIL 201
>Z73910-5|CAI79219.1| 124|Caenorhabditis elegans Hypothetical
protein M117.6 protein.
Length = 124
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -1
Query: 181 YFLMKSNFINIYNXLLDVSNLCKHXNXELRFNFAGCCAPLRK 56
+FL KS FI I+N + ++N + + ++ CC+ +R+
Sbjct: 39 FFLAKSTFILIFNVFMKLNNCFQVFRYQRFLQYSTCCSRIRR 80
>Z82276-4|CAB05241.3| 327|Caenorhabditis elegans Hypothetical
protein K03D3.4 protein.
Length = 327
Score = 29.5 bits (63), Expect = 3.3
Identities = 39/133 (29%), Positives = 58/133 (43%)
Frame = +2
Query: 431 VLFGVFLVYIFLQTFAIPGSIFLSILSGFLFPFYFALVLVCCCSAIGASLCFFLSNLLGK 610
VLFG+F+ L T A I++S++ +FP V + I A + L +LL
Sbjct: 78 VLFGIFV----LCTLAEGLLIYISLI---IFPIGIVYVFI---EMIIADVFHLLISLLA- 126
Query: 611 KLVRKFFPERAAEWSKAVAKHKDNLLNYIVFLRVTPFLPNWFINMSAPVIGVPLVPFALG 790
+ KFF W K V + + YIVF+ +L M + VIG L P+
Sbjct: 127 --MEKFFIYFFPRWEKTVISIQKYIHKYIVFV----YLACCSRYMLSAVIGSSLEPYG-W 179
Query: 791 TFIGVAPPSFVAI 829
F+G F+ I
Sbjct: 180 KFLGPIVQHFLTI 192
>AC006664-1|AAF39902.2| 298|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 40 protein.
Length = 298
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 694 IIEQIVLVFCHCL*PLCCSFWEEF 623
I++ +V FC + P C S W EF
Sbjct: 212 ILDAVVTFFCQFIPPFCVSIWPEF 235
>AF024492-5|AAF98621.1| 334|Caenorhabditis elegans Serpentine
receptor, class h protein129 protein.
Length = 334
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +2
Query: 419 YFYEVLFGVFLVYIFLQ--TFAIPGSIFLSILSGFLFP-FYFALVLVCCCSAIGASLCFF 589
+F+ L + + ++ + F +PG I L +LS P F A LV C + G S+ F
Sbjct: 56 HFWSSLLDITVCFLVIPYTIFPVPGGIPLGVLSIMSVPSFIQAFSLVVCGAFTGISILGF 115
Query: 590 LSN 598
N
Sbjct: 116 FKN 118
>U28928-8|AAA68340.1| 661|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 2 protein.
Length = 661
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 734 FINMSAPVIGVPLVPFALGTFIGVAPPSFV 823
+ N+S P++ V L F LGT +G + PS +
Sbjct: 207 YSNLSKPILDVFLYLFRLGTSLGFSSPSIL 236
>AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical
protein Y39D8B.1 protein.
Length = 1372
Score = 28.3 bits (60), Expect = 7.6
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +2
Query: 710 VTPFLPNWFINMSAPVIGVPLV--PFALGTFIGVAPPSFVAIQAGQPYIL 853
++PF+ + FI +PV+ PLV PFAL FIG+ P+ + P++L
Sbjct: 734 LSPFILSPFI--LSPVVMAPLVLSPFALSPFIGI--PNALTPLILSPFVL 779
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,449,377
Number of Sequences: 27780
Number of extensions: 309493
Number of successful extensions: 938
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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