Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_A10
         (748 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    24   1.7  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    24   1.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   4.0  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   5.3  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   7.0  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   9.3  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   9.3  

>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 725 FNFFNGFLYYIPMTRVNNVW 666
           FN F G L Y+ +T  + VW
Sbjct: 97  FNDFGGRLKYLTLTDASRVW 116


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 725 FNFFNGFLYYIPMTRVNNVW 666
           FN F G L Y+ +T  + VW
Sbjct: 97  FNDFGGRLKYLTLTDASRVW 116


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = +3

Query: 453 IEWLRDGQEIKVEGATVKV 509
           + WL+DG+ + +E A +++
Sbjct: 339 VSWLKDGKPLGLEEAVLRI 357


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +3

Query: 321 THWHHDHVGGVENIYKTIAKNPIIWKHKKSSEDS 422
           T +H    GG+ N+ +   + P  WK  K++E++
Sbjct: 203 TKYHRS--GGLMNVERFPYQPPFAWKILKAAEEA 234


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 119 YWWNHSSHSGKR 84
           Y WNH+  SG+R
Sbjct: 13  YQWNHTVSSGER 24


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +3

Query: 258 YQKHLSDVVNSEKANIEHIVLTHWHHDHVGGV 353
           + KH+ DVV+  +     I L   H  ++  V
Sbjct: 233 FTKHMLDVVSGTQKKKRKIYLFSGHESNIASV 264


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +3

Query: 258 YQKHLSDVVNSEKANIEHIVLTHWHHDHVGGV 353
           + KH+ DVV+  +     I L   H  ++  V
Sbjct: 248 FTKHMLDVVSGTQKKKRKIYLFSGHESNIASV 279


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,550
Number of Sequences: 438
Number of extensions: 5287
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)