Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_A08
         (783 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0446 - 22334291-22334751,22335304-22336191,22336290-223365...    29   5.5  
11_06_0092 + 19973364-19975983,19976272-19976648                       28   7.3  

>01_05_0446 -
           22334291-22334751,22335304-22336191,22336290-22336550,
           22337129-22337588
          Length = 689

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +1

Query: 34  EGRGQVXFSENVSQSFRSQTLGFEASTR 117
           +GRG + FS+ V+QSFR      E++T+
Sbjct: 389 DGRGGIGFSQEVAQSFRFNMEDVESATQ 416


>11_06_0092 + 19973364-19975983,19976272-19976648
          Length = 998

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = -2

Query: 323 TNLLGTGPFRSVITGSF-SETVLFTSWSSISVYIPLWKKRMKKSFPTICCSSRN 165
           ++LLG+G F SV  G F S+    TS  ++ V + L   +  KSF + C + RN
Sbjct: 687 SHLLGSGSFGSVYKGEFDSQDGEITSLVAVKV-LKLETPKALKSFTSECETLRN 739


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,164,515
Number of Sequences: 37544
Number of extensions: 272348
Number of successful extensions: 532
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 532
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)