Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_A05
(872 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_03_0139 + 10632020-10632211,10632876-10632937,10633141-106331... 54 2e-07
06_03_0155 - 17321982-17322214,17323550-17323590,17323831-173238... 51 1e-06
12_01_0791 + 7234021-7234221,7234801-7234862,7235441-7235481,723... 50 2e-06
02_02_0177 + 7484526-7484723,7484913-7484974,7485606-7485646,748... 50 2e-06
06_01_0411 + 2939148-2939354,2939517-2939578,2939712-2939752,294... 45 9e-05
06_01_0409 + 2926072-2926275,2926423-2926484,2926598-2926638,292... 44 1e-04
11_01_0326 - 2435918-2436135,2436232-2436272,2436486-2436547,243... 44 2e-04
12_01_0332 - 2564541-2564758,2564847-2564887,2565138-2565199,256... 43 4e-04
04_03_0855 - 20328695-20328912,20329128-20329168,20329782-203298... 41 0.001
01_01_0831 + 6493897-6494100,6494195-6494256,6498047-6498087,649... 41 0.001
02_04_0085 - 19587026-19587243,19587509-19587549,19587811-195878... 40 0.003
06_03_0423 - 20624149-20624375,20625581-20625621,20625709-206257... 40 0.003
01_01_0723 + 5651593-5651751,5651896-5651957,5652130-5652170,565... 36 0.056
02_04_0481 + 23284296-23284448,23284553-23284753,23284855-232879... 32 0.52
05_06_0093 - 25468271-25468320,25468393-25468433,25468592-254686... 32 0.69
04_04_0352 + 24619621-24619757,24620102-24620411,24621022-246214... 30 2.1
08_02_0597 + 19132492-19133230,19133827-19134371,19134563-19135264 30 2.8
01_06_0666 + 31040768-31041079,31041716-31041889,31041996-31042646 29 3.7
09_02_0020 + 3042502-3042980,3043068-3043176,3043290-3043476,304... 29 4.9
08_01_0255 + 2089543-2089583,2089696-2090089,2090797-2090862,209... 29 6.4
06_01_0469 + 3322886-3323564,3324033-3324953,3325025-3325155,332... 29 6.4
02_04_0179 + 20682852-20684510,20684593-20684661,20684741-206848... 29 6.4
>11_03_0139 +
10632020-10632211,10632876-10632937,10633141-10633181,
10633667-10633883,10634229-10634271
Length = 184
Score = 53.6 bits (123), Expect = 2e-07
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Frame = +3
Query: 555 FLPHLNIDVLYNLKDGTFLPVCAGNVIKPTEALEAPIITYDSDDS-ALWTLAFTSLDGHL 731
F+ ++ V YN K+ T G+ +KP++ L P I + D L+TL D
Sbjct: 19 FVTTASLRVFYNSKEMT-----NGSELKPSQVLNQPRIYIEGRDMRTLYTLVMVDPDAPS 73
Query: 732 YEN--EKEYVHWLVANIPGSAIXK-GETLVEYLQPFPLKGTGYHRYVFVL 872
N ++EY+HW+V +IP + + G +V Y P P G HR+VF+L
Sbjct: 74 PSNPTKREYLHWMVTDIPETTDARFGNEIVPYESPRPT--AGIHRFVFIL 121
>06_03_0155 -
17321982-17322214,17323550-17323590,17323831-17323892,
17324051-17324245
Length = 176
Score = 50.8 bits (116), Expect = 1e-06
Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Frame = +3
Query: 555 FLPHLNIDVLYNLKDGTFLPVCAGNVIKPTEALEAPIITYDSDDSALWTLAFTSLDGHLY 734
F+P + V + KD T G IKP+ A P + + L+ L T D
Sbjct: 21 FVPTTAMSVRFGTKDLT-----NGCEIKPSVAAAPPAVQIAGRVNELFALVMTDPDAPSP 75
Query: 735 ENE--KEYVHWLVANIPGSA-IXKGETLVEYLQPFPLKGTGYHRYVFVL 872
+E++HWLV NIPG +G+ +V Y+ P P G HRYV VL
Sbjct: 76 SEPTMREWLHWLVVNIPGGTDPSQGDVVVPYMGPRP--PVGIHRYVMVL 122
>12_01_0791 +
7234021-7234221,7234801-7234862,7235441-7235481,
7235711-7235940
Length = 177
Score = 50.4 bits (115), Expect = 2e-06
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Frame = +3
Query: 621 AGNVIKPTEALEAPI--ITYDSDDSALWTLAFTSLDGHLYEN--EKEYVHWLVANIP-GS 785
+G+ ++P++ P IT D AL+TL D N ++EY+HWLV ++P G
Sbjct: 38 SGSELRPSQVAGEPAVQITGGRDGRALYTLVMVDPDAPSPSNPSKREYLHWLVTDVPEGG 97
Query: 786 AIXKGETLVEYLQPFPLKGTGYHRYVFVL 872
KG +V Y P P G HR VF++
Sbjct: 98 DTSKGTEVVAYESPRPT--AGIHRLVFIV 124
>02_02_0177 +
7484526-7484723,7484913-7484974,7485606-7485646,
7485845-7486101
Length = 185
Score = 50.4 bits (115), Expect = 2e-06
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Frame = +3
Query: 555 FLPHLNIDVLYNLKDGTFLPVCAGNVIKPTEALEAPIITYDSDDSAL-WTLAFTSLDGHL 731
F+ +++ V+Y DG +PV +G ++ E P++ DD + +TL D
Sbjct: 19 FISTVDLTVMYG-DDG--MPVISGVELRAPAVAEKPVVEVGGDDLRVAYTLVMVDPDAPN 75
Query: 732 YENE--KEYVHWLVANIPGSA-IXKGETLVEYLQPFPLKGTGYHRYVFVL 872
N +EY+HW+V +IP S G +V Y P P TG HR V VL
Sbjct: 76 PSNPTLREYLHWMVTDIPASTDATYGREVVCYESPNPT--TGIHRMVLVL 123
>06_01_0411 +
2939148-2939354,2939517-2939578,2939712-2939752,
2941060-2941289
Length = 179
Score = 44.8 bits (101), Expect = 9e-05
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
Frame = +3
Query: 555 FLPHLNIDVLYNLKDGTFLPVCAGNVIKPTEALEAPIITYDSDDS-ALWTLAFTSLDGHL 731
F+ N+ V Y K V G +KP+ P + +D +TL D
Sbjct: 24 FVRSTNLKVTYGSKT-----VSNGCELKPSMVTHQPRVEVGGNDMRTFYTLVMVDPDAPS 78
Query: 732 YE--NEKEYVHWLVANIPG-SAIXKGETLVEYLQPFPLKGTGYHRYVFVL 872
N +EY+HWLV +IPG +A G+ ++ Y P P G HR VFVL
Sbjct: 79 PSDPNLREYLHWLVTDIPGTTAASFGQEVMCYESPRPT--MGIHRLVFVL 126
>06_01_0409 +
2926072-2926275,2926423-2926484,2926598-2926638,
2927165-2927394
Length = 178
Score = 44.4 bits (100), Expect = 1e-04
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Frame = +3
Query: 615 VCAGNVIKPTEALEAP-IITYDSDDSALWTLAFTSLDGHLYENE--KEYVHWLVANIPG- 782
V G +KP+ + P ++ +D +TL D N +EY+HWLV +IPG
Sbjct: 38 VSNGCELKPSMVTQQPRVVVGGNDMRTFYTLVMVDPDAPSPSNPNLREYLHWLVTDIPGT 97
Query: 783 SAIXKGETLVEYLQPFPLKGTGYHRYVFVL 872
+ G+ ++ Y P P G HR VFVL
Sbjct: 98 TGATFGQEVMCYESPRPT--MGIHRLVFVL 125
>11_01_0326 -
2435918-2436135,2436232-2436272,2436486-2436547,
2436620-2436820
Length = 173
Score = 44.0 bits (99), Expect = 2e-04
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Frame = +3
Query: 555 FLPHLNIDVLYNLKDGTFLPVCAGNVIKPTEALEAPIITYDSDD-SALWTLAFTSLD--G 725
F P + + V YN F G+ + P+ + P + D + +TL T D G
Sbjct: 21 FNPCMKMIVTYNSNKLVF----NGHELYPSAVVSKPRVEVQGGDLRSFFTLVMTDPDVPG 76
Query: 726 HLYENEKEYVHWLVANIPGSAIXK-GETLVEYLQPFPLKGTGYHRYVFVL 872
+E++HW+V +IPG+ G ++ Y P P G HR++FVL
Sbjct: 77 PSDPYLREHLHWIVTDIPGTTDASFGREVISYESPKP--NIGIHRFIFVL 124
>12_01_0332 -
2564541-2564758,2564847-2564887,2565138-2565199,
2565305-2565505
Length = 173
Score = 42.7 bits (96), Expect = 4e-04
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +3
Query: 624 GNVIKPTEALEAPIITYDSDDS-ALWTLAFTSLD--GHLYENEKEYVHWLVANIPGSAIX 794
G+ P+ + P + D + +TL T D G +E++HW+V +IPG+
Sbjct: 40 GHEFYPSAVVSKPRVEVQGGDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDA 99
Query: 795 K-GETLVEYLQPFPLKGTGYHRYVFVL 872
G ++ Y P P G HR+VFVL
Sbjct: 100 SFGREIISYESPKP--SIGIHRFVFVL 124
>04_03_0855 -
20328695-20328912,20329128-20329168,20329782-20329843,
20330023-20330223
Length = 173
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +3
Query: 624 GNVIKPTEALEAPIITYDSDD-SALWTLAFTSLD--GHLYENEKEYVHWLVANIPGSAIX 794
G+ + P+ + P + D + +TL T D G +E++HW+V +IPG+
Sbjct: 40 GHELFPSAVVSKPRVEVQGGDLRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDA 99
Query: 795 K-GETLVEYLQPFPLKGTGYHRYVFVL 872
G +V Y P P G HR+V VL
Sbjct: 100 SFGREVVSYESPKP--NIGIHRFVLVL 124
>01_01_0831 +
6493897-6494100,6494195-6494256,6498047-6498087,
6498218-6498441
Length = 176
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Frame = +3
Query: 615 VCAGNVIKPTEALEAPIITYDSDDS-ALWTLAFTSLDGHLYE--NEKEYVHWLVANIPG- 782
V G ++P+ + P + D +TL D N +EY+HWLV +IP
Sbjct: 38 VANGCELRPSAVADQPRVAVGGPDMRTFYTLVMVDPDAPSPSDPNLREYLHWLVTDIPAT 97
Query: 783 SAIXKGETLVEYLQPFPLKGTGYHRYVFVL 872
+ + G +V Y P P+ G HR VF+L
Sbjct: 98 TGVSFGTEVVCYESPRPV--LGIHRLVFLL 125
>02_04_0085 -
19587026-19587243,19587509-19587549,19587811-19587872,
19587990-19588190
Length = 173
Score = 39.9 bits (89), Expect = 0.003
Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 4/112 (3%)
Frame = +3
Query: 549 GYFLPHLNIDVLYNLKDGTFLPVCAGNVIKPTEALEAPIITYDSDD-SALWTLAFTSLD- 722
G L + N V G V G+ P+ P + D + +TL T D
Sbjct: 15 GEVLDNFNPTVKMTATYGANKQVFNGHEFFPSAVAGKPRVEVQGGDLRSFFTLVMTDPDV 74
Query: 723 -GHLYENEKEYVHWLVANIPGSAIXK-GETLVEYLQPFPLKGTGYHRYVFVL 872
G +E++HW+V +IPG+ G +V Y P P G HR++ VL
Sbjct: 75 PGPSDPYLREHLHWIVTDIPGTTDASFGREVVSYESPRP--NIGIHRFILVL 124
>06_03_0423 -
20624149-20624375,20625581-20625621,20625709-20625770,
20626147-20626338
Length = 173
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Frame = +3
Query: 612 PVCAGNVIKPTEALEAPIITYDSDDSAL-WTLAFTSLDGHLYENE--KEYVHWLVANIPG 782
PV G + + P + DD +TL D N +EY+HW+V +IP
Sbjct: 33 PVFNGKEFRSSAVSMKPRVEIGGDDFRFAYTLVMVDPDAPNPSNPTLREYLHWMVTDIPS 92
Query: 783 SAIXK-GETLVEYLQPFPLKGTGYHRYVFVL 872
S G +V Y P P G HR V VL
Sbjct: 93 STDDSFGREIVTYESPSPT--MGIHRIVMVL 121
>01_01_0723 +
5651593-5651751,5651896-5651957,5652130-5652170,
5654105-5654352
Length = 169
Score = 35.5 bits (78), Expect = 0.056
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 744 KEYVHWLVANIPGSA-IXKGETLVEYLQPFPLKGTGYHRYVFVL 872
+EY+HWLV +IPG+ G +V Y P P G HR VL
Sbjct: 69 REYLHWLVTDIPGTTDANYGREVVCYESPRP--AAGIHRVAVVL 110
>02_04_0481 + 23284296-23284448,23284553-23284753,23284855-23287971,
23288510-23289353,23289468-23290120,23290573-23290676,
23290898-23291000
Length = 1724
Score = 32.3 bits (70), Expect = 0.52
Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 2/117 (1%)
Frame = +3
Query: 240 GNPPIYARSLKQRIQELNYKDELYTSRIDIGFPPIKQSKEVRDHRLQHLRKIKSDKNLEK 419
GN + + LKQ ELN + E +D+ + + K D + +K N EK
Sbjct: 783 GNNSVLEK-LKQAWDELNSESENIKQALDVKNSEVDKLKHALDENNSEIENLKHTLN-EK 840
Query: 420 SSR--NLKLEINLEDVRKEWLKTTGPFHKKQIADHYGVFEHLYGEGYFLPHLNIDVL 584
+S LK +I+ + E LK + I D EHL + L +D++
Sbjct: 841 NSETDKLKQDIDATYMEMENLKYEIASRESAITDLREQVEHLSSQVTHSQKLQLDII 897
>05_06_0093 -
25468271-25468320,25468393-25468433,25468592-25468653,
25468872-25469057
Length = 112
Score = 31.9 bits (69), Expect = 0.69
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +3
Query: 555 FLPHLNIDVLYNLKDGTFLPVCAGNVIKPTEALEAPIITYDSDDSAL-WTLAFTSLDGHL 731
F+ +++ V YN + + AG +KP+ + P + +D + +TL D
Sbjct: 17 FISTISLRVTYNSR-----LLLAGAALKPSAVVSKPQVDVGGNDMRVSYTLVLVDPDAPS 71
Query: 732 YENE--KEYVHWLVANIP 779
+ +EY+HW+V +IP
Sbjct: 72 PSDPSLREYLHWMVTDIP 89
>04_04_0352 +
24619621-24619757,24620102-24620411,24621022-24621429,
24621773-24622357
Length = 479
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +3
Query: 264 SLKQRIQELNYKDELYTSRIDIGFPPIKQSKEVRDHRLQHLRKIKS-DKNLEKSSRNLKL 440
S ++++QE + + LY ++D FP E D +HLRKI S + S++ LK+
Sbjct: 403 SEEEQVQE-SKEQPLYLDKLD-KFPSENNDNEPDDFE-EHLRKIASLSDRTDSSAKELKV 459
Query: 441 EINLEDVRKEWLKTTGPFHKK 503
L+++ K +L+ + K+
Sbjct: 460 S-ELDEIDKIFLRASSLLKKR 479
>08_02_0597 + 19132492-19133230,19133827-19134371,19134563-19135264
Length = 661
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 666 ITYDSD-DSALWTLAFTSLDGHLYENEKEYVHWLVANIPGSAIXKGET 806
+T DSD DSAL +A TS DG Y E +H ++ G+ +G+T
Sbjct: 78 LTLDSDQDSALHVVA-TSGDGEQYVQCAEMIHGRARHLLGATNNRGDT 124
>01_06_0666 + 31040768-31041079,31041716-31041889,31041996-31042646
Length = 378
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 369 HRLQHL-RKIKSDKNLEKSSRNLKLEINLEDVRKEWLKTTGPFHKKQIAD 515
HRLQ L R+ S + ++S +E V + LKTT P H+++++D
Sbjct: 136 HRLQALMRQQASSRAATRASYRKSMEQERISVEETRLKTTTPGHRRRLSD 185
>09_02_0020 +
3042502-3042980,3043068-3043176,3043290-3043476,
3043690-3043784
Length = 289
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +3
Query: 264 SLKQRIQELNYKDELYTSRIDIGFPPIKQSK----EVRDHRLQHLRKIKSDKNLEKSSRN 431
SL + +Q + E + ++ P K+SK ++ H L+ KIK+D+NLE
Sbjct: 199 SLVEGVQSQDNLVEKLAAVPEVILSPSKKSKRRGSDIIQHALERAEKIKADRNLENQKAK 258
Query: 432 LKLEINLEDV 461
E LED+
Sbjct: 259 ---EDQLEDI 265
>08_01_0255 +
2089543-2089583,2089696-2090089,2090797-2090862,
2091067-2091189,2091605-2091685,2091765-2091857,
2092103-2092178,2092255-2092334,2092433-2092504,
2092937-2092996,2093177-2093273,2093498-2093561,
2093706-2093765,2093942-2094035
Length = 466
Score = 28.7 bits (61), Expect = 6.4
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -1
Query: 530 KYAIMVCNLFFMKWTCSF 477
KY + CN++FMK++C F
Sbjct: 370 KYPVPECNIWFMKFSCDF 387
>06_01_0469 +
3322886-3323564,3324033-3324953,3325025-3325155,
3325237-3325317,3328173-3328820
Length = 819
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 255 YARSLKQRIQELNYKDELYTSRIDIGFPPIKQSKEVRDHRLQHLRKI-KSDKNLEKSSR 428
YA SL + QEL+ +++ ++ G + E+R R Q + + K DK +KSS+
Sbjct: 471 YACSLIAKSQELDESRKIFWDTLETGEKALDVFFEIRSLRSQAAKDVSKRDKKKKKSSK 529
>02_04_0179 +
20682852-20684510,20684593-20684661,20684741-20684809,
20686779-20688206
Length = 1074
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 357 EVRDHRLQHLRKIKSDKNLEKSSRNLKLEINLE 455
+ RD HL+ +K+ KNL+K S N+ + N++
Sbjct: 771 QCRDRHACHLQDLKAMKNLQKLSINVTTDANVD 803
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,560,633
Number of Sequences: 37544
Number of extensions: 419115
Number of successful extensions: 968
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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