Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_F_A05
(872 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024756-2|AAK29884.1| 413|Caenorhabditis elegans Hypothetical ... 90 2e-18
AF016423-4|AAX88829.1| 185|Caenorhabditis elegans Hypothetical ... 76 4e-14
AF016423-3|AAB65322.1| 221|Caenorhabditis elegans Hypothetical ... 76 4e-14
AL034365-5|CAA22258.1| 172|Caenorhabditis elegans Hypothetical ... 39 0.005
AC024845-1|AAF60850.2| 347|Caenorhabditis elegans Hypothetical ... 35 0.066
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 35 0.087
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 35 0.087
U23177-2|AAA64331.2| 538|Caenorhabditis elegans Hypothetical pr... 31 1.4
AF016672-5|AAB66120.1| 951|Caenorhabditis elegans Hypothetical ... 30 2.5
AF016672-4|AAD47126.1| 968|Caenorhabditis elegans Hypothetical ... 30 2.5
AF098993-2|AAC67466.1| 549|Caenorhabditis elegans Hypothetical ... 29 3.3
AC025716-10|AAK39607.1| 474|Caenorhabditis elegans Hypothetical... 29 5.7
>AC024756-2|AAK29884.1| 413|Caenorhabditis elegans Hypothetical
protein Y34D9A.1 protein.
Length = 413
Score = 90.2 bits (214), Expect = 2e-18
Identities = 57/159 (35%), Positives = 90/159 (56%), Gaps = 5/159 (3%)
Frame = +3
Query: 411 LEKSSRNLKLEINLEDVRKEWLKTTGPFHKKQIADHYGVFEHLYGEGYFLPHLNIDVLYN 590
LE+ SR+++L+I+++ + E L I H+ VF+HL+G+ F ++ ++ N
Sbjct: 111 LERKSRHMQLKIDIDHLDVENLS---------IYRHFQVFDHLFGDNIFFENVQ-NLQVN 160
Query: 591 LKDGTFLPVCAGNVIKPTEALEAPIITYDS--DDSALWTLAFTSLDGHLYENEK--EYVH 758
++ + V +GNVI L+ P IT +S + TL +LDG+ + K E V
Sbjct: 161 FEND--IVVHSGNVITANSTLKRPEITIESVGNGGGFNTLLMINLDGNALDLGKNGEIVQ 218
Query: 759 WLVANIP-GSAIXKGETLVEYLQPFPLKGTGYHRYVFVL 872
W+++NIP G AI G +++YLQP P GTGYHR FVL
Sbjct: 219 WMISNIPDGEAISAGSEIIDYLQPLPFYGTGYHRVAFVL 257
>AF016423-4|AAX88829.1| 185|Caenorhabditis elegans Hypothetical
protein F40A3.3b protein.
Length = 185
Score = 75.8 bits (178), Expect = 4e-14
Identities = 36/85 (42%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Frame = +3
Query: 624 GNVIKPTEALEAPIITYDSDDSALWTLAFTSLDGHLYENE--KEYVHWLVANIPGSAIXK 797
GNV+ PT+ + P + +D++ AL+TL T D + +E+ HWLV NIPG+ I K
Sbjct: 38 GNVLTPTQVKDTPEVKWDAEPGALYTLIKTDPDAPSRKEPTYREWHHWLVVNIPGNDIAK 97
Query: 798 GETLVEYLQPFPLKGTGYHRYVFVL 872
G+TL EY+ P TG HRYV+++
Sbjct: 98 GDTLSEYIGAGPPPKTGLHRYVYLI 122
>AF016423-3|AAB65322.1| 221|Caenorhabditis elegans Hypothetical
protein F40A3.3a protein.
Length = 221
Score = 75.8 bits (178), Expect = 4e-14
Identities = 36/85 (42%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Frame = +3
Query: 624 GNVIKPTEALEAPIITYDSDDSALWTLAFTSLDGHLYENE--KEYVHWLVANIPGSAIXK 797
GNV+ PT+ + P + +D++ AL+TL T D + +E+ HWLV NIPG+ I K
Sbjct: 74 GNVLTPTQVKDTPEVKWDAEPGALYTLIKTDPDAPSRKEPTYREWHHWLVVNIPGNDIAK 133
Query: 798 GETLVEYLQPFPLKGTGYHRYVFVL 872
G+TL EY+ P TG HRYV+++
Sbjct: 134 GDTLSEYIGAGPPPKTGLHRYVYLI 158
>AL034365-5|CAA22258.1| 172|Caenorhabditis elegans Hypothetical
protein Y69E1A.5 protein.
Length = 172
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Frame = +3
Query: 678 SDDSALWTLAFTSLDGHLYENEK--EYVHWLVANIPGS----AIXKGETLVEYLQPFPLK 839
+D +++T+ D +N E++HWLV NIP S I G+ + Y P P
Sbjct: 57 ADPESIYTVLMIDPDNLSRKNPSVAEWLHWLVCNIPASNIIDGINGGQHQMAYGSPAPGP 116
Query: 840 GTGYHRYVFVL 872
T HRYV ++
Sbjct: 117 RTDLHRYVILM 127
>AC024845-1|AAF60850.2| 347|Caenorhabditis elegans Hypothetical
protein Y65B4BL.3 protein.
Length = 347
Score = 35.1 bits (77), Expect = 0.066
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Frame = -1
Query: 551 SFTIKMFKYAIMVCNLFFMKWTCSFQP---FFSDIFQVYFKF*ISR*FFQVFITF-YFSQ 384
+F I +F YA++V +F++KW SF P +I ++ +F + VF+ F +FS
Sbjct: 180 AFIISIF-YALLVGVIFYLKWRISFAPKNFLHLNILFIFAEFNFYQPASLVFVDFGFFSP 238
Query: 383 MLQSMITNFFTLLY 342
++ T ++ ++Y
Sbjct: 239 LVIHFATLYYIMIY 252
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical protein
F15D4.7 protein.
Length = 2268
Score = 34.7 bits (76), Expect = 0.087
Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 3/130 (2%)
Frame = +3
Query: 357 EVRDHRLQHLRKIKSDKNLEKSSRNLKLEINLEDVRKEWLKTTGPFHKKQIADHYGVFEH 536
E+ D + + +K K LEK++ + L I L D+ + T P K I HYG E
Sbjct: 1622 EIIDPKTKKPKKSMLPK-LEKTTESESLTILLMDLNTKGKSITTPDGKNVIQQHYGELE- 1679
Query: 537 LYGEGYFLP-HLNIDVLYNLKDG-TFLPVCAGNVIKPTEALEAPIITYDSDDSALWTLAF 710
EG P +LNI Y KDG + + + P EA E PI+ ++ A +
Sbjct: 1680 --AEGISFPANLNI---YTDKDGLKRIRKRVKSSVLPAEAHE-PIVIHNKHVLAELIMRE 1733
Query: 711 T-SLDGHLYE 737
T ++GHL E
Sbjct: 1734 THEINGHLPE 1743
>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 34.7 bits (76), Expect = 0.087
Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 3/130 (2%)
Frame = +3
Query: 357 EVRDHRLQHLRKIKSDKNLEKSSRNLKLEINLEDVRKEWLKTTGPFHKKQIADHYGVFEH 536
E+ D + + +K K LEK++ + L I L D+ + T P K I HYG E
Sbjct: 1622 EIIDPKTKKPKKSMLPK-LEKTTESESLTILLMDLNTKGKSITTPDGKNVIQQHYGELE- 1679
Query: 537 LYGEGYFLP-HLNIDVLYNLKDG-TFLPVCAGNVIKPTEALEAPIITYDSDDSALWTLAF 710
EG P +LNI Y KDG + + + P EA E PI+ ++ A +
Sbjct: 1680 --AEGISFPANLNI---YTDKDGLKRIRKRVKSSVLPAEAHE-PIVIHNKHVLAELIMRE 1733
Query: 711 T-SLDGHLYE 737
T ++GHL E
Sbjct: 1734 THEINGHLPE 1743
>U23177-2|AAA64331.2| 538|Caenorhabditis elegans Hypothetical
protein C56G2.4 protein.
Length = 538
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +3
Query: 750 YVHWLVANIPGS----AIXKGETLVEYLQPFPLKGTGYHRYVFVL 872
++HWL +IP + A G T +Y+ P K + H Y+FVL
Sbjct: 373 HLHWLEVDIPAANLNAANGNGLTKADYVPLIPKKPSTCHSYLFVL 417
>AF016672-5|AAB66120.1| 951|Caenorhabditis elegans Hypothetical
protein F56D12.6b protein.
Length = 951
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +3
Query: 342 IKQSKEVRDHRLQHLRKIKSDKNLEKSSRNLKLEINLEDVRKEW 473
++++KE HR Q L K+K + N+ + K+E+ + R+E+
Sbjct: 120 LQKAKETYQHRCQELEKVKKETNVNVKEIS-KVELKVARAREEY 162
>AF016672-4|AAD47126.1| 968|Caenorhabditis elegans Hypothetical
protein F56D12.6a protein.
Length = 968
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +3
Query: 342 IKQSKEVRDHRLQHLRKIKSDKNLEKSSRNLKLEINLEDVRKEW 473
++++KE HR Q L K+K + N+ + K+E+ + R+E+
Sbjct: 137 LQKAKETYQHRCQELEKVKKETNVNVKEIS-KVELKVARAREEY 179
>AF098993-2|AAC67466.1| 549|Caenorhabditis elegans Hypothetical
protein T10B11.2 protein.
Length = 549
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 372 DDHELLYFALLVGSQCRFDLCTVH 301
+DH + +GS+C D+CTVH
Sbjct: 290 NDHATSAVHIAIGSECNVDVCTVH 313
>AC025716-10|AAK39607.1| 474|Caenorhabditis elegans Hypothetical
protein Y39G10AR.7 protein.
Length = 474
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 285 ELNYKDELYTSRIDIGFPPIKQSKEVRDHRLQHLRKIKSDKNLEKSSRN 431
ELN K TS ID+ PP+ +S E R+ + + K+L S R+
Sbjct: 175 ELNSKVSK-TSAIDVSVPPVTESSEADSVRIDLSFLVDTPKSLSDSRRS 222
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,246,253
Number of Sequences: 27780
Number of extensions: 406195
Number of successful extensions: 1083
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1078
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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