Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_F_A03
         (728 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    22   5.2  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    22   5.2  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    22   5.2  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    22   5.2  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   5.2  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    22   6.8  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    22   6.8  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    22   6.8  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    22   6.8  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    21   9.0  

>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 702 LVPVLLNNVINKCPAIMLAVNRT 634
           L+P +LNN  N+C +  + +  T
Sbjct: 56  LLPEVLNNHCNRCTSRQIGIANT 78


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 514 N*KYKSHIYSYNSTXNTLYFNTIYSNY*NHQKYY 615
           N KY S+  +YN+  N  Y N   +NY    K Y
Sbjct: 88  NYKY-SNYNNYNNNYNNNYNNNYNNNYKKLYKNY 120


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 514 N*KYKSHIYSYNSTXNTLYFNTIYSNY*NHQKYY 615
           N KY S+  +YN+  N  Y N   +NY    K Y
Sbjct: 88  NYKY-SNYNNYNNNYNNNYNNNYNNNYKKLYKNY 120


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 562 TLYFNTIYSNY*NHQKYYS 618
           T++ N  Y+NY N + YY+
Sbjct: 311 TIHNNNNYNNYNNKKLYYN 329


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 541 SYNSTXNTLYFNTIYSNY*NHQKYYSTWNFSST 639
           +Y+S  NTL +  + SN   + K+ +  N SST
Sbjct: 300 AYSSLENTLKYYEVGSNVPFNFKFITDANSSST 332


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 514 N*KYKSHIYSYNSTXNTLYFNTIY 585
           N KY  +  +YN+    LY+N  Y
Sbjct: 95  NYKYNYNNNNYNNNCKKLYYNINY 118


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 514 N*KYKSHIYSYNSTXNTLYFNTIY 585
           N KY  +  +YN+    LY+N  Y
Sbjct: 95  NYKYNYNNNNYNNNCKKLYYNINY 118


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 514 N*KYKSHIYSYNSTXNTLYFNTIY 585
           N KY  +  +YN+    LY+N  Y
Sbjct: 95  NYKYNYNNNNYNNNCKKLYYNINY 118


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 514 N*KYKSHIYSYNSTXNTLYFNTIY 585
           N KY  +  +YN+    LY+N  Y
Sbjct: 95  NYKYNYNNNNYNNNCKKLYYNINY 118


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 538 YSYNSTXNTLYFNTIY 585
           Y+YN+    LY+N  Y
Sbjct: 98  YNYNNNCKKLYYNINY 113


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,183
Number of Sequences: 438
Number of extensions: 2296
Number of successful extensions: 20
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)