Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_P23
         (679 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095078-1|AAM11406.1|  539|Drosophila melanogaster RE26454p pro...    32   0.83 
AE014134-1256|AAF52499.2|  539|Drosophila melanogaster CG4698-PA...    32   0.83 
AF533773-1|AAN04479.1|  539|Drosophila melanogaster Wnt4 protein...    31   1.9  

>AY095078-1|AAM11406.1|  539|Drosophila melanogaster RE26454p
           protein.
          Length = 539

 Score = 31.9 bits (69), Expect = 0.83
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 358 VKMEPRCKISCYNRATC*MHCHYCSRLENNFY 263
           VK   +C+    N   C + C YC RLEN ++
Sbjct: 506 VKQVEKCRCRFNNGRCCQLICDYCQRLENKYF 537


>AE014134-1256|AAF52499.2|  539|Drosophila melanogaster CG4698-PA
           protein.
          Length = 539

 Score = 31.9 bits (69), Expect = 0.83
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 358 VKMEPRCKISCYNRATC*MHCHYCSRLENNFY 263
           VK   +C+    N   C + C YC RLEN ++
Sbjct: 506 VKQVEKCRCRFNNGRCCQLICDYCQRLENKYF 537


>AF533773-1|AAN04479.1|  539|Drosophila melanogaster Wnt4 protein
           protein.
          Length = 539

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -1

Query: 358 VKMEPRCKISCYNRATC*MHCHYCSRLENNFY 263
           VK   +C+    N   C + C YC R+EN ++
Sbjct: 506 VKQVEKCRCRFNNGRCCQLICDYCQRVENKYF 537


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,064,517
Number of Sequences: 53049
Number of extensions: 494393
Number of successful extensions: 775
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)