Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_P20
         (638 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF106583-2|AAD03129.2|  255|Caenorhabditis elegans Hypothetical ...   207   6e-54
AF025472-5|AAB71076.1|  423|Caenorhabditis elegans Hypothetical ...    30   1.6  
Z79603-10|CAI79233.1|  224|Caenorhabditis elegans Hypothetical p...    29   3.7  
AF040652-5|AAB95022.2|  378|Caenorhabditis elegans Hypothetical ...    28   4.9  
AF025450-9|AAB70938.2|  409|Caenorhabditis elegans C-type lectin...    27   8.6  

>AF106583-2|AAD03129.2|  255|Caenorhabditis elegans Hypothetical
           protein F23C8.5 protein.
          Length = 255

 Score =  207 bits (505), Expect = 6e-54
 Identities = 104/182 (57%), Positives = 126/182 (69%), Gaps = 1/182 (0%)
 Frame = -3

Query: 633 TALAMGADRAIHVEVAGAEYDTLQPIHVAKILAKLSQDEKADLVIVGKQAIDDDSNQTAQ 454
           TALA GAD+A+HV+V  AE   L+  HVAK L K+ + EK D V +GKQAIDDDS+QTA 
Sbjct: 74  TALAKGADKAVHVQVTDAEAGKLESFHVAKALQKIVEQEKFDAVFLGKQAIDDDSSQTAP 133

Query: 453 MTAALLDWPQGTFASKIEKTD-GALTITREIDGGLEVIKTKIPAVLSADLRLNEPRYATL 277
           + A LL+WPQ  +ASK+E    G + +TREIDGGL+ IK K+P VLSADLRLNEPRYATL
Sbjct: 134 ILAGLLEWPQALYASKVEDAGAGHMKVTREIDGGLDTIKVKVPFVLSADLRLNEPRYATL 193

Query: 276 PNIMXXXXXXXXXXXXKDLGVDLAPRIKVVSVEDPPVRQAGSIIPDVDTXVAKLKEGGHV 97
           PNIM            KDL VD+ P+ + + V +PPVRQAG  + DV   VAKLKE G V
Sbjct: 194 PNIMKAKKKPLKNIPIKDLNVDITPQTETLEVTEPPVRQAGGFVDDVSALVAKLKEKGFV 253

Query: 96  XA 91
            A
Sbjct: 254 KA 255


>AF025472-5|AAB71076.1|  423|Caenorhabditis elegans Hypothetical
           protein ZK250.7 protein.
          Length = 423

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 10/40 (25%), Positives = 23/40 (57%)
 Frame = -3

Query: 216 VDLAPRIKVVSVEDPPVRQAGSIIPDVDTXVAKLKEGGHV 97
           +D+  R+K++ V+D P  +   ++      ++ +KEGG +
Sbjct: 254 IDVEVRVKIIEVKDVPCLEKSFVLSHTIKNMSNIKEGGSI 293


>Z79603-10|CAI79233.1|  224|Caenorhabditis elegans Hypothetical
           protein M163.11 protein.
          Length = 224

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +2

Query: 26  KHLISKCSLCLFHSXSIXSSXXAXTCPPSLSLATXVSTSGMMEPACLTGGSSTETT 193
           ++  S CSLC   S S  SS  A T   S + AT    S     +  +  SST ++
Sbjct: 30  QYCASTCSLCSDSSDSSSSSSTASTSSSSSTAATSSDDSSSSSSSSSSSASSTSSS 85


>AF040652-5|AAB95022.2|  378|Caenorhabditis elegans Hypothetical
           protein T05A8.5 protein.
          Length = 378

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +3

Query: 381 LEHHQSFLSLMQMCLVANLIKQQSSVLSGWSHHL 482
           L H+Q+ L+  ++ L   LI+Q S  +SG SH L
Sbjct: 344 LIHYQAKLTAQRVILDVQLIQQHSMAMSGSSHAL 377


>AF025450-9|AAB70938.2|  409|Caenorhabditis elegans C-type lectin
           protein 3 protein.
          Length = 409

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 16/59 (27%), Positives = 29/59 (49%)
 Frame = +1

Query: 172 RIFHRDHLDTRCQVHPKVFSTYFFERLLLCFHDVRQCSISWFIQSQISTQYSWDFCLDN 348
           R+FH +   TR +   ++F    F+      + +   +I+ FI SQ+ T +   FC +N
Sbjct: 35  RLFHEETYHTRAEQTCRIFEGTLFD----VKNAIDNRAIASFIGSQVETVWMGLFCFNN 89


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,953,617
Number of Sequences: 27780
Number of extensions: 279899
Number of successful extensions: 735
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)