Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_P19
         (676 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC16C4.12 |||NatB N-acetyltransferase complex catalytic subuni...   166   3e-42
SPAC15E1.08 |||NatA N-acetyltransferase complex subunit Ard1 |Sc...    83   3e-17
SPBC15D4.06 |||NatC N-acetyltransferase complex catalytic subuni...    59   7e-10
SPAC56E4.07 |||N-acetyltransferase |Schizosaccharomyces pombe|ch...    29   0.81 
SPCC191.11 |inv1||beta-fructofuranosidase|Schizosaccharomyces po...    27   2.5  
SPCC1672.05c |||tyrosine-tRNA ligase |Schizosaccharomyces pombe|...    27   3.3  
SPBC651.05c |dot2||EAP30 family protein Dot2|Schizosaccharomyces...    26   4.3  
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos...    26   4.3  
SPCC1322.13 |ade6|min1|phosphoribosylaminoimidazole carboxylase ...    26   5.7  
SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier ...    25   7.6  
SPAC4C5.03 |||CTNS domain protein |Schizosaccharomyces pombe|chr...    25   10.0 
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb...    25   10.0 
SPBC428.14 |||1-acylglycerol-3-phosphate acyltransferase |Schizo...    25   10.0 

>SPCC16C4.12 |||NatB N-acetyltransferase complex catalytic subunit
           Nat3 |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 180

 Score =  166 bits (403), Expect = 3e-42
 Identities = 78/138 (56%), Positives = 96/138 (69%), Gaps = 2/138 (1%)
 Frame = -3

Query: 503 MTTLRPFTCEDMLRFNNVNLDPLTETYGLSFYTQYLAHWPEYFQVVESPSGE--IMGYIM 330
           MT  R F   D+  FNN+NLDPLTET+ +SFY  YL  WP    V ES   +  +MGYIM
Sbjct: 1   MTDTRKFKATDLFSFNNINLDPLTETFNISFYLSYLNKWPSLCVVQESDLSDPTLMGYIM 60

Query: 329 GKAEGHGENWHGHVTALTVSPDYRRLGLAATLMNLLEEVSEKKKAYFVDLFVRVSNKVAI 150
           GK+EG G+ WH HVTA+TV+P+ RRLGLA T+M+ LE V   + A+FVDLFVR SN +AI
Sbjct: 61  GKSEGTGKEWHTHVTAITVAPNSRRLGLARTMMDYLETVGNSENAFFVDLFVRASNALAI 120

Query: 149 NMYKNLGYIVXRTVLEYY 96
           + YK LGY V R V+ YY
Sbjct: 121 DFYKGLGYSVYRRVIGYY 138



 Score = 32.3 bits (70), Expect = 0.066
 Identities = 11/21 (52%), Positives = 18/21 (85%)
 Frame = -1

Query: 82  DEDAYDMRKACSRDIXKQAVR 20
           DED++DMRK  SRD+ ++++R
Sbjct: 145 DEDSFDMRKPLSRDVNRESIR 165


>SPAC15E1.08 |||NatA N-acetyltransferase complex subunit Ard1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 177

 Score = 83.4 bits (197), Expect = 3e-17
 Identities = 47/137 (34%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
 Frame = -3

Query: 494 LRPFTCEDMLRFNNVNLDPLTETYGLSFYTQYLAHWPEYFQVVESPSGEIMGYIMGKAEG 315
           +RP    D+    N NL  L E Y L +Y  +   WP    V   P G ++GY++ K E 
Sbjct: 3   IRPARISDLTGMQNCNLHNLPENYQLKYYLYHAISWPMLSYVATDPKGRVVGYVLAKMEE 62

Query: 314 HGENW--HGHVTALTVSPDYRRLGLAATLM-NLLEEVSEKKKAYFVDLFVRVSNKVAINM 144
             ++   HGH+T+++V   YR LGLA  LM      + E   A ++ L VR SN+ AI++
Sbjct: 63  EPKDGIPHGHITSVSVMRSYRHLGLAKRLMVQSQRAMVEVYGAKYMSLHVRKSNRAAIHL 122

Query: 143 YKN-LGYIVXRTVLEYY 96
           Y++ L + V     +YY
Sbjct: 123 YRDTLQFDVQGIESKYY 139


>SPBC15D4.06 |||NatC N-acetyltransferase complex catalytic subunit
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 150

 Score = 58.8 bits (136), Expect = 7e-10
 Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 1/137 (0%)
 Frame = -3

Query: 503 MTTLRPFTCEDMLRFNNVNLDPLTETYGLSFYTQYLAHWPEYFQVVESPSGEIMGYIMGK 324
           M T+ P++ + +     +    L+E Y    Y  ++  WPE F  V   +   +G ++ K
Sbjct: 1   MVTIVPYSHQYLKDICQLIQKDLSEPYSKYVYRYFVHQWPE-FSFVALDNDRFIGAVICK 59

Query: 323 AEGH-GENWHGHVTALTVSPDYRRLGLAATLMNLLEEVSEKKKAYFVDLFVRVSNKVAIN 147
            + H G    G++  L +  +YR  G+A  L     +V + + A  + L   V N+ A++
Sbjct: 60  QDVHRGTTLRGYIAMLAIVKEYRGQGIATKLTQASLDVMKNRGAQEIVLETEVDNEAAMS 119

Query: 146 MYKNLGYIVXRTVLEYY 96
            Y+ LG+   + +  YY
Sbjct: 120 FYERLGFCRYKRLYRYY 136


>SPAC56E4.07 |||N-acetyltransferase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 235

 Score = 28.7 bits (61), Expect = 0.81
 Identities = 15/56 (26%), Positives = 32/56 (57%)
 Frame = -3

Query: 293 HVTALTVSPDYRRLGLAATLMNLLEEVSEKKKAYFVDLFVRVSNKVAINMYKNLGY 126
           H+  + V P  +  G+   L+++  +++++   Y +  F+  S K+A  MY++LGY
Sbjct: 149 HIHFVCVDPALQGNGVGGYLLDMAHDLADE---YQIPCFLMAS-KMAFKMYEHLGY 200


>SPCC191.11 |inv1||beta-fructofuranosidase|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 581

 Score = 27.1 bits (57), Expect = 2.5
 Identities = 9/20 (45%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = -3

Query: 437 LTETYGLSFYTQY-LAHWPE 381
           +++ YG++FY+ Y L HW E
Sbjct: 246 MSQNYGIAFYSSYDLIHWTE 265


>SPCC1672.05c |||tyrosine-tRNA ligase |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 401

 Score = 26.6 bits (56), Expect = 3.3
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -3

Query: 281 LTVSPDYRRLGLAATLMNLLEEVSEKKKAY 192
           LT+SP   +LGL +++  LL  V E+ K Y
Sbjct: 306 LTLSPQDLKLGLESSVNTLLAGVQEQLKQY 335


>SPBC651.05c |dot2||EAP30 family protein Dot2|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 252

 Score = 26.2 bits (55), Expect = 4.3
 Identities = 13/53 (24%), Positives = 26/53 (49%)
 Frame = -3

Query: 227 LLEEVSEKKKAYFVDLFVRVSNKVAINMYKNLGYIVXRTVLEYYXWRSR*RCL 69
           +LE+++ K+    + L +     V +   + LGY+    + + Y W  R RC+
Sbjct: 159 VLEKIAGKQYIRSLPLELNTDQNVVLEAVEILGYVTISILRDNYAW-ERSRCI 210


>SPBC725.07 |pex5||peroxisomal targeting signal receptor
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 598

 Score = 26.2 bits (55), Expect = 4.3
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 476 EDMLRFNNVNLDPLTETYGLSFYTQYLAH 390
           ED L+ NN++ DP T +   SF    LAH
Sbjct: 222 EDFLKSNNISDDPYTSSVN-SFANDNLAH 249


>SPCC1322.13 |ade6|min1|phosphoribosylaminoimidazole carboxylase
           Ade6|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 552

 Score = 25.8 bits (54), Expect = 5.7
 Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
 Frame = -3

Query: 467 LRFNNVNLDPLTETYGLSFYTQYLAHWPEYFQVVESPSGEIMG---YIMGKAEGHGENWH 297
           L F+ +N    T T             P+Y   +   S  I G   ++ GKAE       
Sbjct: 297 LPFSEINTQLSTSTTHALMVNILGTDDPDYVSKIAKRSLSIPGATLHLYGKAESRKGRKM 356

Query: 296 GHVTALTVSP 267
           GHVT ++ SP
Sbjct: 357 GHVTIISDSP 366


>SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier for
           pyridoxine, pyridoxal, and pyridoxamine
           Bsu1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 526

 Score = 25.4 bits (53), Expect = 7.6
 Identities = 13/58 (22%), Positives = 25/58 (43%)
 Frame = -3

Query: 305 NWHGHVTALTVSPDYRRLGLAATLMNLLEEVSEKKKAYFVDLFVRVSNKVAINMYKNL 132
           N    V  L +S +    GL    +  L ++  +K  YF  +FV     ++  + +N+
Sbjct: 113 NVSAQVATLCLSMNILGSGLGPMFLGPLSDIGGRKPVYFCSIFVYTVFNISCALPRNI 170


>SPAC4C5.03 |||CTNS domain protein |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 302

 Score = 25.0 bits (52), Expect = 10.0
 Identities = 15/58 (25%), Positives = 32/58 (55%)
 Frame = -3

Query: 371 VVESPSGEIMGYIMGKAEGHGENWHGHVTALTVSPDYRRLGLAATLMNLLEEVSEKKK 198
           ++++P G ++GY++ +    G NW  ++  + VS   + L L   +  L +E S +K+
Sbjct: 222 MMQTPGGFLIGYLLSRLP--GTNWTTYMMYI-VSACLQGLLLMLCMFYLHKEKSRRKR 276


>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pombe|chr
            2|||Manual
          Length = 2386

 Score = 25.0 bits (52), Expect = 10.0
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 347  IMGYIMGKAEGHGEN 303
            I+GY++G  + HGEN
Sbjct: 2221 IVGYVLGLGDRHGEN 2235


>SPBC428.14 |||1-acylglycerol-3-phosphate acyltransferase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 350

 Score = 25.0 bits (52), Expect = 10.0
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +1

Query: 193 YAFFFSDTSSSKFINVAAS-PSLL*SGLTVK 282
           Y F+FSD S  K+   A S P L   G+ +K
Sbjct: 234 YTFYFSDPSPKKYAADAFSLPKLFFEGVPIK 264


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,520,579
Number of Sequences: 5004
Number of extensions: 48308
Number of successful extensions: 116
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 114
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 309878492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)