Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_P19
(676 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0805 - 27839576-27839667,27839763-27839823,27840082-278401... 192 2e-49
04_04_1283 - 32373774-32373821,32373834-32373958,32375717-32376227 92 3e-19
11_05_0016 - 18410889-18411104,18411326-18411381,18412883-184130... 55 5e-08
01_05_0667 + 24142121-24142319,24142742-24142864,24144522-24144739 45 6e-05
03_02_0081 - 5506194-5506197,5506310-5507170,5507299-5507456,550... 36 0.030
04_04_0166 - 23250473-23250746,23251349-23252025 35 0.068
02_01_0602 + 4481869-4482111,4482315-4482472,4482603-4483467 32 0.36
03_06_0062 + 31384440-31384619,31384788-31384957,31385143-31385992 31 0.64
12_02_0870 - 23852923-23853228,23853416-23853728,23853813-238539... 29 2.6
06_03_0946 - 26208253-26209075,26209181-26209329,26209525-26209812 29 3.4
07_01_0119 - 908600-909592,909685-909885 28 5.9
03_01_0366 - 2848449-2849032,2849155-2849233,2849346-2849608,284... 28 7.8
01_01_0485 - 3576989-3577173,3577476-3577795,3577895-3578178,357... 28 7.8
>03_05_0805 -
27839576-27839667,27839763-27839823,27840082-27840151,
27841167-27841299,27841928-27842018,27842097-27842174
Length = 174
Score = 192 bits (468), Expect = 2e-49
Identities = 86/137 (62%), Positives = 106/137 (77%), Gaps = 1/137 (0%)
Frame = -3
Query: 503 MTTLRPFTCEDMLRFNNVNLDPLTETYGLSFYTQYLAHWPEYFQVVESPSGEIMGYIMGK 324
MTT+R F C+D+LRF++VNLD LTET+ +SFY Y+A WP+YF SP +MGYIMGK
Sbjct: 1 MTTIRRFCCDDLLRFSSVNLDHLTETFNMSFYMTYMARWPDYFHAAVSPGDRVMGYIMGK 60
Query: 323 AEGHGENWHGHVTALTVSPDYRRLGLAATLMNLLEEVSEK-KKAYFVDLFVRVSNKVAIN 147
EG GE+WHGHVTA++V+ ++RR LA LMNLLEE+S+K KAYFVDLFVR SN AI
Sbjct: 61 VEGQGESWHGHVTAVSVATEFRRQKLAKKLMNLLEEISDKMDKAYFVDLFVRASNMPAIR 120
Query: 146 MYKNLGYIVXRTVLEYY 96
MY+ LGY+V R VL YY
Sbjct: 121 MYEKLGYVVYRRVLRYY 137
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = -1
Query: 82 DEDAYDMRKACSRDIXKQAVRPM 14
+ED DMRKA S+D+ K+++ P+
Sbjct: 140 EEDGLDMRKALSQDVEKKSIIPL 162
>04_04_1283 - 32373774-32373821,32373834-32373958,32375717-32376227
Length = 227
Score = 92.3 bits (219), Expect = 3e-19
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 3/139 (2%)
Frame = -3
Query: 503 MTTLRPFTCEDMLRFNNVNLDPLTETYGLSFYTQYLAHWPEYFQVVESPSGEIMGYIMGK 324
M +R T +D+L NL L E Y + +Y ++ WP+ V E G I+GY++ K
Sbjct: 1 MVCIRQATIDDLLAMQACNLMCLPENYQMKYYLYHMLSWPQLLFVAEDYGGRIVGYVLAK 60
Query: 323 -AEGHGENWHGHVTALTVSPDYRRLGLAATLMNLLEEVSEKK-KAYFVDLFVRVSNKVAI 150
E E HGH+T+L V +R+LGLA LM+ + ++ A +V L VR SN+ A
Sbjct: 61 MEEDPSEPCHGHITSLAVLRSHRKLGLATKLMSAAQAAMDQVFGAEYVSLHVRRSNRAAF 120
Query: 149 NMY-KNLGYIVXRTVLEYY 96
N+Y LGY + +YY
Sbjct: 121 NLYTSTLGYQIHDVEAKYY 139
>11_05_0016 -
18410889-18411104,18411326-18411381,18412883-18413009,
18413113-18413307
Length = 197
Score = 55.2 bits (127), Expect = 5e-08
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Frame = -3
Query: 443 DPLTETYGLSFYTQYLAHWPEY-FQVVESPSGEIMGYIMGKAEGHGENWHGHVTALTVSP 267
+ L+E Y + Y ++ WP+ F + G+ +G ++ K H + G++ L V
Sbjct: 41 EELSEPYSIFTYRYFVYLWPQLTFLAFDPKDGKCVGTVVCKMGEHRGAFRGYIAMLVVLK 100
Query: 266 DYRRLGLAATLMNLLEEVSEKKKAYFVDLFVRVSNKVAINMYKNLGYIVXRTVLEYY 96
YR G+A L+ V + V L V+NK A+ +Y LG+I + + YY
Sbjct: 101 PYRGRGIATELVTRSIRVMMESGCEEVTLEAEVTNKGALALYGRLGFIRAKRLYRYY 157
>01_05_0667 + 24142121-24142319,24142742-24142864,24144522-24144739
Length = 179
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/66 (31%), Positives = 38/66 (57%)
Frame = -3
Query: 293 HVTALTVSPDYRRLGLAATLMNLLEEVSEKKKAYFVDLFVRVSNKVAINMYKNLGYIVXR 114
++ L V YR LG+ + L+N + ++ EK+ + L V+ +N AI YK G+ + +
Sbjct: 92 YIMTLGVLAPYRSLGIGSKLLNHVIDLCEKQNIPEIYLHVQTNNDDAIAFYKKFGFEITK 151
Query: 113 TVLEYY 96
T+ +YY
Sbjct: 152 TIEKYY 157
>03_02_0081 -
5506194-5506197,5506310-5507170,5507299-5507456,
5507549-5507740
Length = 404
Score = 35.9 bits (79), Expect = 0.030
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = -3
Query: 296 GHVTALTVSPDYRRLGLAATLMNLLEEVSEKKKAYFVDLFVRVSNKVAINMYK-NLGYIV 120
G++ L V+P +RR+GLA ++ +E E+ A + + SN+ ++ ++ GY
Sbjct: 105 GYILGLRVAPSHRRMGLALRMVRRMEAWFERMGAEYAYMATDKSNEASLRLFTVRCGYSK 164
Query: 119 XRT 111
RT
Sbjct: 165 FRT 167
>04_04_0166 - 23250473-23250746,23251349-23252025
Length = 316
Score = 34.7 bits (76), Expect = 0.068
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = -3
Query: 293 HVTALTVSPDYRRLGLAATLMNLLEEVSEKKKAY-FVDLFVRVSNKVAINMYKNLGYIVX 117
++ +TV RR G+ L+ E++ K A V L R+ ++V NMY+ GY +
Sbjct: 214 YICNMTVKTSLRRRGIGKQLLKACEDLIIKMDAKRHVYLHCRIIDQVPFNMYRKAGYNIV 273
Query: 116 RT 111
+T
Sbjct: 274 QT 275
>02_01_0602 + 4481869-4482111,4482315-4482472,4482603-4483467
Length = 421
Score = 32.3 bits (70), Expect = 0.36
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -3
Query: 281 LTVSPDYRRLGLAATLMNLLEEVSEKKKAYFVDLFVRVSNKVAINMYK 138
L VSP +RRLG+A L+ EE + A + + SN ++ +++
Sbjct: 127 LRVSPSHRRLGIATELVRRAEEWCAARGAAYATMATTASNAASLALFQ 174
>03_06_0062 + 31384440-31384619,31384788-31384957,31385143-31385992
Length = 399
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -3
Query: 293 HVTALTVSPDYRRLGLAATLMNLLEEVSEKKKAYFVDLFVRVSNKVAINMYK-NLGYIVX 117
++ L VSP YRR G+ L+ +EE + A + + N+ ++ ++ GY
Sbjct: 106 YILGLRVSPRYRRKGVGKKLVGRMEEWFRQSGAEYSYMATEQDNEASVRLFTGRCGYSKF 165
Query: 116 RT 111
RT
Sbjct: 166 RT 167
>12_02_0870 - 23852923-23853228,23853416-23853728,23853813-23853938,
23854038-23854243,23854311-23854443,23854607-23854688,
23854785-23854914,23855034-23855126,23855211-23855333,
23855786-23855977,23858230-23858394,23858697-23858768,
23858826-23858945,23859873-23859949,23860032-23860398,
23860738-23861871
Length = 1212
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = -3
Query: 449 NLDPLTETYGLSFYTQYLAHWPEYFQVVESPSGEIMGYIMGKAEGHGENWHG 294
++D + LS+ YL+ W ++ Q +E P + Y++G H +W G
Sbjct: 925 SIDMVIHIGDLSYANGYLSQWDQFTQQIE-PIASTVPYMIGSG-NHERDWPG 974
>06_03_0946 - 26208253-26209075,26209181-26209329,26209525-26209812
Length = 419
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -3
Query: 293 HVTALTVSPDYRRLGLAATLMNLLEEVSEKKKAYFVDLFVRVSNKVAINMYK-NLGYIVX 117
++ L VSP +RRLG+ L+ EE + A + SN ++ ++ GY
Sbjct: 135 NLLGLRVSPSHRRLGIGTALVRRAEEWCVARGAEHATMATTESNAASLALFTGRFGYAPF 194
Query: 116 R 114
R
Sbjct: 195 R 195
>07_01_0119 - 908600-909592,909685-909885
Length = 397
Score = 28.3 bits (60), Expect = 5.9
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 12/106 (11%)
Frame = -3
Query: 392 HWPEYFQVVESPSG-----EIMGYIMGKAE----GHGENWH--GHVTALTVSPDYRRLGL 246
H P Y +V G EI+G + G + G + + ++ L VSP +RR G+
Sbjct: 60 HSPAYLMLVAEAVGGPLGTEIVGVVRGCVKTVACGRSQLFSKVAYLLGLRVSPRHRRRGI 119
Query: 245 AATLMNLLEEVSEKKKAYFVDLFVRVSNKVAINMYKN-LGYIVXRT 111
L+ +EE + A + + N+ ++ ++ GY RT
Sbjct: 120 GRRLVERMEEWFREMGAEYAYVATDRDNEPSVRLFTGACGYAKFRT 165
>03_01_0366 -
2848449-2849032,2849155-2849233,2849346-2849608,
2849742-2849862
Length = 348
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -3
Query: 425 YGLSFYTQYLAHWPEYFQVVESPSGEIMGYIMGKAEGHGENWHGH 291
+G Y Q P Y+Q +G+ +GY A G G +H H
Sbjct: 264 HGYFAYPQQQGPPPSYYQYYGGGNGDGVGYANPNAGGAGGYYHPH 308
>01_01_0485 -
3576989-3577173,3577476-3577795,3577895-3578178,
3579780-3580095,3580441-3580859
Length = 507
Score = 27.9 bits (59), Expect = 7.8
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -3
Query: 392 HWPEYFQVVESPSGEIMGYIMGKAEGH 312
+WP+Y + + S +IM + + K+ GH
Sbjct: 308 YWPQYTPITKRASHDIMLFTVSKSTGH 334
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,991,409
Number of Sequences: 37544
Number of extensions: 270731
Number of successful extensions: 541
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 538
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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