Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_P12
         (663 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M29863-1|AAA35820.1|  346|Homo sapiens protein ( Human farnesyl ...    58   2e-08
J05262-1|AAA52423.1|  353|Homo sapiens FDPS protein.                   58   2e-08
D14697-1|BAA03523.2|  420|Homo sapiens KIAA1293 protein.               58   2e-08
BC010004-1|AAH10004.1|  419|Homo sapiens farnesyl diphosphate sy...    58   2e-08
AL139410-1|CAI12715.1|  419|Homo sapiens farnesyl diphosphate sy...    58   2e-08
Z47055-1|CAA87327.1|  348|Homo sapiens farnesyl pyrophosphate sy...    56   9e-08
BC050292-1|AAH50292.1|  298|Homo sapiens LOC619190 protein protein.    42   0.002

>M29863-1|AAA35820.1|  346|Homo sapiens protein ( Human farnesyl
           pyrophosphate synthetase mRNA (hpt807), 3' end. ).
          Length = 346

 Score = 58.4 bits (135), Expect = 2e-08
 Identities = 26/68 (38%), Positives = 41/68 (60%)
 Frame = -1

Query: 660 QIMEDNYGVNKPEAIARIKDLYEELQLPHTYSVFEETTYDLLRTQIQQVTRGLPHELFFK 481
           QI+++NYG  + E +AR+K LYEEL LP  +  +EE +Y  +   I+Q    LP  +F  
Sbjct: 277 QILKENYGQKEAEKVARVKALYEELDLPAVFLQYEEDSYSHIMALIEQYAAPLPPAVFLG 336

Query: 480 ILDNIFRR 457
           +   I++R
Sbjct: 337 LARKIYKR 344


>J05262-1|AAA52423.1|  353|Homo sapiens FDPS protein.
          Length = 353

 Score = 58.4 bits (135), Expect = 2e-08
 Identities = 26/68 (38%), Positives = 41/68 (60%)
 Frame = -1

Query: 660 QIMEDNYGVNKPEAIARIKDLYEELQLPHTYSVFEETTYDLLRTQIQQVTRGLPHELFFK 481
           QI+++NYG  + E +AR+K LYEEL LP  +  +EE +Y  +   I+Q    LP  +F  
Sbjct: 284 QILKENYGQKEAEKVARVKALYEELDLPAVFLQYEEDSYSHIMALIEQYAAPLPPAVFLG 343

Query: 480 ILDNIFRR 457
           +   I++R
Sbjct: 344 LARKIYKR 351


>D14697-1|BAA03523.2|  420|Homo sapiens KIAA1293 protein.
          Length = 420

 Score = 58.4 bits (135), Expect = 2e-08
 Identities = 26/68 (38%), Positives = 41/68 (60%)
 Frame = -1

Query: 660 QIMEDNYGVNKPEAIARIKDLYEELQLPHTYSVFEETTYDLLRTQIQQVTRGLPHELFFK 481
           QI+++NYG  + E +AR+K LYEEL LP  +  +EE +Y  +   I+Q    LP  +F  
Sbjct: 351 QILKENYGQKEAEKVARVKALYEELDLPAVFLQYEEDSYSHIMALIEQYAAPLPPAVFLG 410

Query: 480 ILDNIFRR 457
           +   I++R
Sbjct: 411 LARKIYKR 418


>BC010004-1|AAH10004.1|  419|Homo sapiens farnesyl diphosphate
           synthase (farnesyl pyrophosphate synthetase,
           dimethylallyl protein.
          Length = 419

 Score = 58.4 bits (135), Expect = 2e-08
 Identities = 26/68 (38%), Positives = 41/68 (60%)
 Frame = -1

Query: 660 QIMEDNYGVNKPEAIARIKDLYEELQLPHTYSVFEETTYDLLRTQIQQVTRGLPHELFFK 481
           QI+++NYG  + E +AR+K LYEEL LP  +  +EE +Y  +   I+Q    LP  +F  
Sbjct: 350 QILKENYGQKEAEKVARVKALYEELDLPAVFLQYEEDSYSHIMALIEQYAAPLPPAVFLG 409

Query: 480 ILDNIFRR 457
           +   I++R
Sbjct: 410 LARKIYKR 417


>AL139410-1|CAI12715.1|  419|Homo sapiens farnesyl diphosphate
           synthase (farnesyl pyrophosphate synthetase,
           dimethylallyl protein.
          Length = 419

 Score = 58.4 bits (135), Expect = 2e-08
 Identities = 26/68 (38%), Positives = 41/68 (60%)
 Frame = -1

Query: 660 QIMEDNYGVNKPEAIARIKDLYEELQLPHTYSVFEETTYDLLRTQIQQVTRGLPHELFFK 481
           QI+++NYG  + E +AR+K LYEEL LP  +  +EE +Y  +   I+Q    LP  +F  
Sbjct: 350 QILKENYGQKEAEKVARVKALYEELDLPAVFLQYEEDSYSHIMALIEQYAAPLPPAVFLG 409

Query: 480 ILDNIFRR 457
           +   I++R
Sbjct: 410 LARKIYKR 417


>Z47055-1|CAA87327.1|  348|Homo sapiens farnesyl pyrophosphate
           synthetase like-4 protein.
          Length = 348

 Score = 56.4 bits (130), Expect = 9e-08
 Identities = 25/68 (36%), Positives = 40/68 (58%)
 Frame = -1

Query: 660 QIMEDNYGVNKPEAIARIKDLYEELQLPHTYSVFEETTYDLLRTQIQQVTRGLPHELFFK 481
           QI+++NYG  + E + R+K LYEEL LP  +  +EE +Y  +   I+Q    LP  +F  
Sbjct: 279 QILKENYGQKEAEKVPRVKALYEELDLPAVFLQYEEDSYSHIMALIEQYAAPLPPAVFLG 338

Query: 480 ILDNIFRR 457
           +   I++R
Sbjct: 339 LARQIYKR 346


>BC050292-1|AAH50292.1|  298|Homo sapiens LOC619190 protein protein.
          Length = 298

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 17/39 (43%), Positives = 27/39 (69%)
 Frame = -1

Query: 660 QIMEDNYGVNKPEAIARIKDLYEELQLPHTYSVFEETTY 544
           QI+++NY   + E +AR+K LYEEL LP  +  +E+ +Y
Sbjct: 252 QILKENYRQKEAEKVARVKALYEELDLPAVFLQYEKDSY 290


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,750,194
Number of Sequences: 237096
Number of extensions: 1149682
Number of successful extensions: 3606
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3606
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)