Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_P08
         (388 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81124-9|CAB03379.2|  328|Caenorhabditis elegans Hypothetical pr...    27   3.5  
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr...    27   4.6  
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr...    27   4.6  
AL032657-8|CAB63370.1|  389|Caenorhabditis elegans Hypothetical ...    26   8.1  

>Z81124-9|CAB03379.2|  328|Caenorhabditis elegans Hypothetical
           protein T21B4.12 protein.
          Length = 328

 Score = 27.5 bits (58), Expect = 3.5
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +3

Query: 147 Q*TFQVEFQDFLKETTCCSLLRFIRVI 227
           Q TF V        TTCCS+L FI++I
Sbjct: 182 QKTFLVVMMTICALTTCCSVLLFIKLI 208


>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
           protein C18C4.5b protein.
          Length = 1046

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = -2

Query: 210 SIKNSMSSPLENLETQLEMFIENVRQIRIIVSDFQPXGAKCTESKKCKLK 61
           S K++M   +ENL+ QL +   +++ + +  SD         E++  KLK
Sbjct: 103 SEKDAMEQEIENLQRQLNIKTASLQSLMLAKSDSSKTDKLSEENETLKLK 152


>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
           protein C18C4.5a protein.
          Length = 1022

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = -2

Query: 210 SIKNSMSSPLENLETQLEMFIENVRQIRIIVSDFQPXGAKCTESKKCKLK 61
           S K++M   +ENL+ QL +   +++ + +  SD         E++  KLK
Sbjct: 103 SEKDAMEQEIENLQRQLNIKTASLQSLMLAKSDSSKTDKLSEENETLKLK 152


>AL032657-8|CAB63370.1|  389|Caenorhabditis elegans Hypothetical
           protein Y47H9C.8 protein.
          Length = 389

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -2

Query: 189 SPLENLETQLEMFIENVRQIRIIVSD 112
           SP+E+LE QLE    NV ++  I++D
Sbjct: 39  SPIEDLELQLEQPEINVEEVGRIIAD 64


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,999,301
Number of Sequences: 27780
Number of extensions: 115771
Number of successful extensions: 206
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)