Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_P05
         (663 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0522 - 4506667-4507254,4507474-4507824,4507967-4508163,450...    28   5.8  
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468...    28   7.6  
01_02_0109 + 11206740-11207693                                         28   7.6  

>05_01_0522 -
           4506667-4507254,4507474-4507824,4507967-4508163,
           4508324-4508582,4508656-4508868,4508946-4509071,
           4509159-4509296,4509376-4509721,4509822-4510088,
           4510427-4510616,4510700-4510784,4510885-4511072,
           4511262-4511457,4512027-4512113
          Length = 1076

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 5/31 (16%)
 Frame = +3

Query: 201 NCMHYFNSNHKNRQAICY-----IGKKTICF 278
           +C HYFNS+   R+A+C+     +G+KT C+
Sbjct: 558 DCDHYFNSSKALREAMCFMMDPALGRKT-CY 587


>08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,
            4683834-4684204,4684290-4684835,4684927-4685027,
            4685117-4685933,4686025-4686213,4686313-4686384,
            4686477-4686587,4686647-4686652,4686694-4686794,
            4687714-4687813,4687891-4687986,4688157-4688273,
            4688367-4688492,4688566-4688619,4688745-4688992,
            4689087-4689195,4689284-4689583,4689799-4689963
          Length = 2240

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 23/74 (31%), Positives = 33/74 (44%)
 Frame = -2

Query: 464  NKIWSIAPVPECDHVCNGLEFYVEKGDIVFLDTRIWYHSTRIPAGEFSLTVQSEYG*VSD 285
            +K  S+  +P+ DHVC   E  V+ GD  +LD       T    G FS +   E      
Sbjct: 867  HKSKSVPNIPK-DHVCTVEELSVKVGDWYYLD------GTGHERGPFSYSELQELAKKGT 919

Query: 284  KFETNSLFTNITNS 243
              E +S+F  I N+
Sbjct: 920  ILEGSSVFRKIDNT 933


>01_02_0109 + 11206740-11207693
          Length = 317

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/50 (24%), Positives = 25/50 (50%)
 Frame = -2

Query: 536 GYEIGAVMHLDYISRLMWQGQVSGNKIWSIAPVPECDHVCNGLEFYVEKG 387
           GY + +   + +++R +W+  + G         P  D V +G++F +E G
Sbjct: 116 GYSLASKQDVSHLARYLWESFLGGRPSAPGGRRPLGDAVLDGVDFDIEGG 165


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,234,595
Number of Sequences: 37544
Number of extensions: 290965
Number of successful extensions: 574
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 574
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)