Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_P03
         (481 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY029256-1|AAK32965.1|   77|Drosophila melanogaster cytochrome c...    76   3e-14
AE014134-909|AAF52241.3|   77|Drosophila melanogaster CG14028-PA...    76   3e-14
AY070808-1|AAL48430.1|   87|Drosophila melanogaster AT20031p pro...    47   1e-05
AE014134-976|AAN10559.1|   87|Drosophila melanogaster CG31644-PA...    47   1e-05
Y12322-1|CAA72991.1| 1191|Drosophila melanogaster u-shaped protein.    28   7.6  
BT015278-1|AAT94507.1| 1191|Drosophila melanogaster LD12631p pro...    28   7.6  
AF145657-1|AAD38632.1|  538|Drosophila melanogaster BcDNA.GH1012...    28   7.6  
AE014298-2503|AAF48682.1|  538|Drosophila melanogaster CG4928-PB...    28   7.6  
AE014298-2502|AAN09429.1|  538|Drosophila melanogaster CG4928-PA...    28   7.6  
AE014134-116|AAF51488.2| 1191|Drosophila melanogaster CG2762-PA ...    28   7.6  

>AY029256-1|AAK32965.1|   77|Drosophila melanogaster cytochrome c
           oxidase subunit VIc protein.
          Length = 77

 Score = 75.8 bits (178), Expect = 3e-14
 Identities = 36/78 (46%), Positives = 49/78 (62%)
 Frame = -3

Query: 290 MAGESAVSTASKPQMRGLLNAVIKRNIIVALALSGVAGFTFKQIIGNERKRKYAEFYRTY 111
           MA   A S+A  P +RGL NA IKRN+ V+L L+ V    +K ++ + +K  YA+FY  Y
Sbjct: 1   MANTPATSSAG-PVLRGLHNATIKRNLAVSLGLTAVVTIAYKILVNDPKKAAYADFYSKY 59

Query: 110 DAEKEFEEMRKKGXFQAC 57
           DA K FE M+  G FQ+C
Sbjct: 60  DANKSFERMKAAGRFQSC 77


>AE014134-909|AAF52241.3|   77|Drosophila melanogaster CG14028-PA
           protein.
          Length = 77

 Score = 75.8 bits (178), Expect = 3e-14
 Identities = 36/78 (46%), Positives = 49/78 (62%)
 Frame = -3

Query: 290 MAGESAVSTASKPQMRGLLNAVIKRNIIVALALSGVAGFTFKQIIGNERKRKYAEFYRTY 111
           MA   A S+A  P +RGL NA IKRN+ V+L L+ V    +K ++ + +K  YA+FY  Y
Sbjct: 1   MANTPATSSAG-PVLRGLHNATIKRNLAVSLGLTAVVTIAYKILVNDPKKAAYADFYSKY 59

Query: 110 DAEKEFEEMRKKGXFQAC 57
           DA K FE M+  G FQ+C
Sbjct: 60  DANKSFERMKAAGRFQSC 77


>AY070808-1|AAL48430.1|   87|Drosophila melanogaster AT20031p
           protein.
          Length = 87

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 23/64 (35%), Positives = 32/64 (50%)
 Frame = -3

Query: 218 RNIIVALALSGVAGFTFKQIIGNERKRKYAEFYRTYDAEKEFEEMRKKGXFQACERXTSR 39
           RN+ +A  L+ +A   F  +  N RKRKY  FY TYD    F+ M   G   +C   +  
Sbjct: 20  RNVKMACTLALLAPLLFYTLHNNPRKRKYRNFYSTYDPMDAFDRMMSGGYLSSCPPGSGP 79

Query: 38  VEDD 27
            +DD
Sbjct: 80  KKDD 83


>AE014134-976|AAN10559.1|   87|Drosophila melanogaster CG31644-PA
           protein.
          Length = 87

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 23/64 (35%), Positives = 32/64 (50%)
 Frame = -3

Query: 218 RNIIVALALSGVAGFTFKQIIGNERKRKYAEFYRTYDAEKEFEEMRKKGXFQACERXTSR 39
           RN+ +A  L+ +A   F  +  N RKRKY  FY TYD    F+ M   G   +C   +  
Sbjct: 20  RNVKMACTLALLAPLLFYTLHNNPRKRKYRNFYSTYDPMDAFDRMMSGGYLSSCPPGSGP 79

Query: 38  VEDD 27
            +DD
Sbjct: 80  KKDD 83


>Y12322-1|CAA72991.1| 1191|Drosophila melanogaster u-shaped protein.
          Length = 1191

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 159 DLLEGKTSDARESQSNNNVTFDDGIEE 239
           D LE + +D+R+ Q+NNN   DD  E+
Sbjct: 42  DQLEDQLNDSRDPQNNNNNIDDDADED 68


>BT015278-1|AAT94507.1| 1191|Drosophila melanogaster LD12631p
           protein.
          Length = 1191

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 159 DLLEGKTSDARESQSNNNVTFDDGIEE 239
           D LE + +D+R+ Q+NNN   DD  E+
Sbjct: 42  DQLEDQLNDSRDPQNNNNNIDDDADED 68


>AF145657-1|AAD38632.1|  538|Drosophila melanogaster BcDNA.GH10120
           protein.
          Length = 538

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
 Frame = -3

Query: 224 IKRNIIVALALSGVAGFTFKQIIGNERKRKYAEFYRTYDAEKEFEEMRKKGX--FQACER 51
           +K  I++A+   G  G+   +I+  +++RK  +  +   AEKE E           A E 
Sbjct: 455 MKLYILLAVLTLGCIGYVIVEILYRKKQRKLKKQEKLEAAEKEKEAAAAAAAAALAAAEA 514

Query: 50  XTSRVEDDDD 21
               VE+ DD
Sbjct: 515 GADGVEETDD 524


>AE014298-2503|AAF48682.1|  538|Drosophila melanogaster CG4928-PB,
           isoform B protein.
          Length = 538

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
 Frame = -3

Query: 224 IKRNIIVALALSGVAGFTFKQIIGNERKRKYAEFYRTYDAEKEFEEMRKKGX--FQACER 51
           +K  I++A+   G  G+   +I+  +++RK  +  +   AEKE E           A E 
Sbjct: 455 MKLYILLAVLTLGCIGYVIVEILYRKKQRKLKKQEKLEAAEKEKEAAAAAAAAALAAAEA 514

Query: 50  XTSRVEDDDD 21
               VE+ DD
Sbjct: 515 GADGVEETDD 524


>AE014298-2502|AAN09429.1|  538|Drosophila melanogaster CG4928-PA,
           isoform A protein.
          Length = 538

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
 Frame = -3

Query: 224 IKRNIIVALALSGVAGFTFKQIIGNERKRKYAEFYRTYDAEKEFEEMRKKGX--FQACER 51
           +K  I++A+   G  G+   +I+  +++RK  +  +   AEKE E           A E 
Sbjct: 455 MKLYILLAVLTLGCIGYVIVEILYRKKQRKLKKQEKLEAAEKEKEAAAAAAAAALAAAEA 514

Query: 50  XTSRVEDDDD 21
               VE+ DD
Sbjct: 515 GADGVEETDD 524


>AE014134-116|AAF51488.2| 1191|Drosophila melanogaster CG2762-PA
           protein.
          Length = 1191

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 159 DLLEGKTSDARESQSNNNVTFDDGIEE 239
           D LE + +D+R+ Q+NNN   DD  E+
Sbjct: 42  DQLEDQLNDSRDPQNNNNNIDDDADED 68


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,553,559
Number of Sequences: 53049
Number of extensions: 336999
Number of successful extensions: 1012
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1663799760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)