BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_O20
(664 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT010101-1|AAQ22570.1| 1111|Drosophila melanogaster GH15653p pro... 29 7.5
AE014134-3530|AAN11133.3| 975|Drosophila melanogaster CG2225-PF... 29 7.5
AE014134-3529|AAS64734.2| 1111|Drosophila melanogaster CG2225-PE... 29 7.5
AE014134-3528|AAF57225.3| 1111|Drosophila melanogaster CG2225-PA... 29 7.5
AE014134-3527|AAN11134.2| 1100|Drosophila melanogaster CG2225-PB... 29 7.5
>BT010101-1|AAQ22570.1| 1111|Drosophila melanogaster GH15653p
protein.
Length = 1111
Score = 28.7 bits (61), Expect = 7.5
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 449 AEDSRHSNTIVTSRL-VKTNTMSWLIHLRR*TKKS 348
+EDS +TI T VK N ++W IH R KKS
Sbjct: 336 SEDSLEESTISTELTPVKQNGVAWEIHFRNSKKKS 370
>AE014134-3530|AAN11133.3| 975|Drosophila melanogaster CG2225-PF,
isoform F protein.
Length = 975
Score = 28.7 bits (61), Expect = 7.5
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 449 AEDSRHSNTIVTSRL-VKTNTMSWLIHLRR*TKKS 348
+EDS +TI T VK N ++W IH R KKS
Sbjct: 211 SEDSLEESTISTELTPVKQNGVAWEIHFRNSKKKS 245
>AE014134-3529|AAS64734.2| 1111|Drosophila melanogaster CG2225-PE,
isoform E protein.
Length = 1111
Score = 28.7 bits (61), Expect = 7.5
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 449 AEDSRHSNTIVTSRL-VKTNTMSWLIHLRR*TKKS 348
+EDS +TI T VK N ++W IH R KKS
Sbjct: 336 SEDSLEESTISTELTPVKQNGVAWEIHFRNSKKKS 370
>AE014134-3528|AAF57225.3| 1111|Drosophila melanogaster CG2225-PA,
isoform A protein.
Length = 1111
Score = 28.7 bits (61), Expect = 7.5
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 449 AEDSRHSNTIVTSRL-VKTNTMSWLIHLRR*TKKS 348
+EDS +TI T VK N ++W IH R KKS
Sbjct: 336 SEDSLEESTISTELTPVKQNGVAWEIHFRNSKKKS 370
>AE014134-3527|AAN11134.2| 1100|Drosophila melanogaster CG2225-PB,
isoform B protein.
Length = 1100
Score = 28.7 bits (61), Expect = 7.5
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 449 AEDSRHSNTIVTSRL-VKTNTMSWLIHLRR*TKKS 348
+EDS +TI T VK N ++W IH R KKS
Sbjct: 336 SEDSLEESTISTELTPVKQNGVAWEIHFRNSKKKS 370
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,608,254
Number of Sequences: 53049
Number of extensions: 601020
Number of successful extensions: 1171
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -