Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_O20
         (664 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82093-1|CAB05018.1|  229|Caenorhabditis elegans Hypothetical pr...    31   0.73 
Z70207-4|CAA94133.1|  337|Caenorhabditis elegans Hypothetical pr...    30   1.3  
Z72505-1|CAA96608.1|  338|Caenorhabditis elegans Hypothetical pr...    28   5.1  

>Z82093-1|CAB05018.1|  229|Caenorhabditis elegans Hypothetical
           protein ZK39.2 protein.
          Length = 229

 Score = 31.1 bits (67), Expect = 0.73
 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = +1

Query: 403 TSREVTMVFEWRLSSASGNTVGFIKNN---KNSTICLRCMIPH 522
           TS   T  F W  SSASG T GF+ NN    NS +  +C + H
Sbjct: 141 TSCSTTSSFRWTDSSASG-TAGFVWNNVQPDNSDLNSQCAVLH 182


>Z70207-4|CAA94133.1|  337|Caenorhabditis elegans Hypothetical
           protein F15A2.4 protein.
          Length = 337

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
 Frame = +2

Query: 515 SRTFIVYMLTQLTNNMIHFLHLYLNRILGSQYI-------LS*RSDKQTLKH 649
           S+  ++Y++ +  N  +H + +YL  ILG Q+I       L  R  + TLKH
Sbjct: 27  SQLLLLYLMLKCQNRSLHEMRIYLFNILGLQFISTFSAFVLQCRLKRVTLKH 78


>Z72505-1|CAA96608.1|  338|Caenorhabditis elegans Hypothetical
           protein C50C10.2 protein.
          Length = 338

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +1

Query: 565 SFLTFVFKSNFGVTIYPFL 621
           +F+ FV+ SN+GV I PF+
Sbjct: 109 AFIVFVYASNYGVMICPFM 127


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,241,045
Number of Sequences: 27780
Number of extensions: 331236
Number of successful extensions: 725
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)