Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_O18
         (681 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC080620-1|AAH80620.1|   56|Homo sapiens C2orf12 protein protein.      31   3.8  
BC069763-1|AAH69763.1|   56|Homo sapiens chromosome 2 open readi...    31   3.8  
BC069706-1|AAH69706.1|   56|Homo sapiens chromosome 2 open readi...    31   3.8  
BC069687-1|AAH69687.1|   56|Homo sapiens chromosome 2 open readi...    31   3.8  
BC065192-1|AAH65192.1|   56|Homo sapiens C2orf12 protein protein.      31   3.8  
AF358454-1|AAM00228.1|   56|Homo sapiens cervical cancer oncogen...    31   3.8  
AC092153-2|AAX93094.1|   56|Homo sapiens unknown protein.              31   3.8  

>BC080620-1|AAH80620.1|   56|Homo sapiens C2orf12 protein protein.
          Length = 56

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = +3

Query: 81  KNNFETLKFILLKFTVIAXL 140
           K NFET+KF++ K+TVI+ L
Sbjct: 33  KTNFETMKFLIHKYTVISTL 52


>BC069763-1|AAH69763.1|   56|Homo sapiens chromosome 2 open reading
           frame 12 protein.
          Length = 56

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = +3

Query: 81  KNNFETLKFILLKFTVIAXL 140
           K NFET+KF++ K+TVI+ L
Sbjct: 33  KTNFETMKFLIHKYTVISTL 52


>BC069706-1|AAH69706.1|   56|Homo sapiens chromosome 2 open reading
           frame 12 protein.
          Length = 56

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = +3

Query: 81  KNNFETLKFILLKFTVIAXL 140
           K NFET+KF++ K+TVI+ L
Sbjct: 33  KTNFETMKFLIHKYTVISTL 52


>BC069687-1|AAH69687.1|   56|Homo sapiens chromosome 2 open reading
           frame 12 protein.
          Length = 56

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = +3

Query: 81  KNNFETLKFILLKFTVIAXL 140
           K NFET+KF++ K+TVI+ L
Sbjct: 33  KTNFETMKFLIHKYTVISTL 52


>BC065192-1|AAH65192.1|   56|Homo sapiens C2orf12 protein protein.
          Length = 56

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = +3

Query: 81  KNNFETLKFILLKFTVIAXL 140
           K NFET+KF++ K+TVI+ L
Sbjct: 33  KTNFETMKFLIHKYTVISTL 52


>AF358454-1|AAM00228.1|   56|Homo sapiens cervical cancer oncogene 4
           protein.
          Length = 56

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = +3

Query: 81  KNNFETLKFILLKFTVIAXL 140
           K NFET+KF++ K+TVI+ L
Sbjct: 33  KTNFETMKFLIHKYTVISTL 52


>AC092153-2|AAX93094.1|   56|Homo sapiens unknown protein.
          Length = 56

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = +3

Query: 81  KNNFETLKFILLKFTVIAXL 140
           K NFET+KF++ K+TVI+ L
Sbjct: 33  KTNFETMKFLIHKYTVISTL 52


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,073,632
Number of Sequences: 237096
Number of extensions: 1258132
Number of successful extensions: 1681
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1681
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)