Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_O18
         (681 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              23   3.6  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   4.7  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   6.2  

>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 399 NGEWPXKRRMTC 364
           NG+WP  R++ C
Sbjct: 60  NGQWPETRQLKC 71


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 230  IMQILTYTQYALLDSSF 180
            IM + TYTQY+++  +F
Sbjct: 1044 IMNLKTYTQYSVVVQAF 1060


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -3

Query: 373 NDMCASRHLSAM**IALKIATLLFSKYPKLVLNLF 269
           ND+   R  + M  ++     LLFSKY     N F
Sbjct: 349 NDLSIDRSTNTMYVLSDNFQQLLFSKYDAKKRNFF 383


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,852
Number of Sequences: 438
Number of extensions: 3270
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)