Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_O17
         (743 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF022985-1|AAB69971.1|  231|Caenorhabditis elegans Hypothetical ...    30   2.0  
Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AC006769-9|AAF60585.2|  779|Caenorhabditis elegans Hypothetical ...    28   8.0  
AC006645-2|AAF39844.2|  796|Caenorhabditis elegans Hypothetical ...    28   8.0  

>AF022985-1|AAB69971.1|  231|Caenorhabditis elegans Hypothetical
           protein T15B7.10 protein.
          Length = 231

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = +3

Query: 498 VELFLWKSFLFDNNIHIKQILFTFCLYNLCVNSNVKNKICYKLSQYSLTSL 650
           V+LF+  S L+D N  I   L +F  +NL V +++K  + +KL      S+
Sbjct: 119 VKLFVAISMLYDLNAKIVHRLASFVDWNLVVVADIKTPLDWKLENVHFLSV 169


>Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical protein
            F15D4.1 protein.
          Length = 1529

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
 Frame = -3

Query: 270  KLIQKKVARIKKKQMIV*SVLLARRGLRQAXKQ--IECLLKRDLIEELE 130
            KL+   +A+I   Q I+   L A+ G  +A KQ  IEC + ++  EE+E
Sbjct: 1260 KLVHDTLAKIGAPQYILSKALAAKSGKMEALKQLLIECEICKNPDEEVE 1308


>Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical protein
            F15D4.1 protein.
          Length = 1529

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
 Frame = -3

Query: 270  KLIQKKVARIKKKQMIV*SVLLARRGLRQAXKQ--IECLLKRDLIEELE 130
            KL+   +A+I   Q I+   L A+ G  +A KQ  IEC + ++  EE+E
Sbjct: 1260 KLVHDTLAKIGAPQYILSKALAAKSGKMEALKQLLIECEICKNPDEEVE 1308


>AC006769-9|AAF60585.2|  779|Caenorhabditis elegans Hypothetical
           protein Y45G12C.11 protein.
          Length = 779

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +2

Query: 56  IQSIXLSQISPFFV-CIKHXAVSQFPSNSSIKSRFSKH 166
           I S+    ++ F V C+ H   S +P N + K  FS H
Sbjct: 10  IHSLKFLLVAVFMVTCLSHLYSSYYPENFTFKEGFSSH 47


>AC006645-2|AAF39844.2|  796|Caenorhabditis elegans Hypothetical
           protein F56A4.6 protein.
          Length = 796

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +2

Query: 56  IQSIXLSQISPFFV-CIKHXAVSQFPSNSSIKSRFSKH 166
           I S+    ++ F V C+ H   S +P N + K  FS H
Sbjct: 10  IHSLKFLLVAVFMVTCLSHLYSSYYPENFTFKEGFSSH 47


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,555,800
Number of Sequences: 27780
Number of extensions: 251937
Number of successful extensions: 545
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)