Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_O16
         (414 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024805-12|AAK39343.1|  557|Caenorhabditis elegans Hypothetical...    29   1.3  
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr...    27   5.4  
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re...    27   5.4  
AF022967-1|AAY86215.1|  370|Caenorhabditis elegans Hypothetical ...    27   5.4  
Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical pr...    27   7.1  
Z49073-5|CAA88890.1| 1122|Caenorhabditis elegans Hypothetical pr...    26   9.4  

>AC024805-12|AAK39343.1|  557|Caenorhabditis elegans Hypothetical
           protein Y51H7C.12 protein.
          Length = 557

 Score = 29.1 bits (62), Expect = 1.3
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = -2

Query: 170 STISQFLCPNQAHLGVACCYV*RNSVSSYRRMREANEMVKLSLKIEG 30
           STI  +LC   +H G  C ++  +  SS+       EMV + ++I+G
Sbjct: 428 STIMSYLC---SHQGYKCKFLPHSISSSFNYFESPREMVPVLIQIDG 471


>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
            F29D11.1 protein.
          Length = 4753

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -2

Query: 245  PFSEEDCIRQGGICVRTEECDPENISTISQFLCP 144
            P S   CI Q  +C    +C  E +S  S   CP
Sbjct: 2880 PCSNGHCINQTKVCDGHNDCHDEQVSDESLATCP 2913


>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
            protein protein.
          Length = 4753

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -2

Query: 245  PFSEEDCIRQGGICVRTEECDPENISTISQFLCP 144
            P S   CI Q  +C    +C  E +S  S   CP
Sbjct: 2880 PCSNGHCINQTKVCDGHNDCHDEQVSDESLATCP 2913


>AF022967-1|AAY86215.1|  370|Caenorhabditis elegans Hypothetical
           protein C13A2.12 protein.
          Length = 370

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -3

Query: 253 HKHHSVRRIASDKEVYACARRNVIQKTYRRFRN 155
           HK  ++ R+ + K  +A ARRN IQ+  R   N
Sbjct: 332 HKKKALARLNALKRKHAVARRNAIQRQARAAAN 364


>Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical protein
            ZC84.1 protein.
          Length = 1556

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -2

Query: 215  GGICVRTEECDPENISTISQFLCPNQAHLGVACCYV 108
            GG C    +C    +  +   LC N+A LG AC  V
Sbjct: 1211 GGFCQEEIQCSSNQV--LHNGLCHNKAKLGEACLTV 1244


>Z49073-5|CAA88890.1| 1122|Caenorhabditis elegans Hypothetical protein
            ZK970.6 protein.
          Length = 1122

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = +1

Query: 163  IVDMFSGSHSSVRTHIPPCLMQSSSLNGVCVSKGLLHTVTAISKTMTKTHCIS 321
            ++ M   +HS +  H P     SS    +   KG++ T   + KT + T  +S
Sbjct: 1025 MIHMSEAAHSLLTDHYPHQYETSSRGEVIIKGKGVMETFWVLGKTDSDTKSLS 1077


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,191,259
Number of Sequences: 27780
Number of extensions: 183582
Number of successful extensions: 423
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 423
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)