Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_O16
         (414 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   7.3  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   7.3  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   7.3  

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = +1

Query: 10  HFPFQHVPSIFKLSFTISFASLIRR*EDTEFLQT 111
           H P    PS  + S  I  ASL    E+ E L T
Sbjct: 343 HMPLLADPSFAQFSQEIGLASLGASDEEIEKLST 376


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 159  RNRRYVFWIT 188
            + RRY FW+T
Sbjct: 1244 KTRRYDFWVT 1253


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 211 VYACARRNVIQKTYRRFRN 155
           VY+  RR  ++ T  RF N
Sbjct: 197 VYSKTRRRALEHTLDRFHN 215


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,288
Number of Sequences: 438
Number of extensions: 1873
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10503195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)