Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_O09
(345 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC116455-1|AAI16456.1| 125|Homo sapiens chromosome 1 open readi... 75 8e-14
BC025793-1|AAH25793.1| 106|Homo sapiens C1orf31 protein protein. 75 8e-14
AL355472-3|CAI22929.1| 125|Homo sapiens novel protein protein. 75 8e-14
AL355472-2|CAI22928.1| 155|Homo sapiens novel protein protein. 75 8e-14
AL355472-4|CAI22930.1| 79|Homo sapiens novel protein protein. 74 1e-13
X54473-1|CAA38352.1| 86|Homo sapiens cytochrome oxidase subuni... 41 0.001
X13923-1|CAA32114.1| 86|Homo sapiens protein ( Human mRNA for ... 41 0.001
CR542137-1|CAG46934.1| 86|Homo sapiens COX6B protein. 41 0.001
CR456789-1|CAG33070.1| 86|Homo sapiens COX6B protein. 41 0.001
BT006945-1|AAP35591.1| 86|Homo sapiens cytochrome c oxidase su... 41 0.001
BC002478-1|AAH02478.1| 86|Homo sapiens cytochrome c oxidase su... 41 0.001
BC001015-1|AAH01015.1| 86|Homo sapiens cytochrome c oxidase su... 41 0.001
AC002115-3|AAB57628.1| 86|Homo sapiens COXG protein. 41 0.001
BC100902-1|AAI00903.1| 88|Homo sapiens COX6B2 protein protein. 35 0.078
BC100901-1|AAI00902.1| 88|Homo sapiens cytochrome c oxidase su... 35 0.078
BC100900-1|AAI00901.1| 88|Homo sapiens cytochrome c oxidase su... 35 0.078
BC100899-1|AAI00900.1| 88|Homo sapiens cytochrome c oxidase su... 35 0.078
BC064548-1|AAH64548.1| 88|Homo sapiens cytochrome c oxidase su... 35 0.078
BC026123-1|AAH26123.3| 88|Homo sapiens cytochrome c oxidase su... 35 0.078
AY152398-1|AAN46751.1| 88|Homo sapiens cytochrome c oxidase su... 35 0.078
BC029486-1|AAH29486.1| 207|Homo sapiens TM2 domain containing 1... 30 2.2
AF353990-1|AAK35064.1| 207|Homo sapiens beta-amyloid binding pr... 30 2.2
AY358185-1|AAQ88552.1| 613|Homo sapiens olfactomedin-like protein. 29 2.9
AL354928-4|CAI39635.2| 652|Homo sapiens olfactomedin-like 2A pr... 29 2.9
AL354928-3|CAI39634.1| 318|Homo sapiens olfactomedin-like 2A pr... 29 2.9
AK074709-1|BAC11152.1| 353|Homo sapiens protein ( Homo sapiens ... 29 2.9
AB119055-1|BAD38864.1| 652|Homo sapiens photomedin-1 protein. 29 2.9
>BC116455-1|AAI16456.1| 125|Homo sapiens chromosome 1 open reading
frame 31 protein.
Length = 125
Score = 74.5 bits (175), Expect = 8e-14
Identities = 30/67 (44%), Positives = 46/67 (68%)
Frame = -1
Query: 204 FT*IRMSFPDKEQRKKCWDARDKYWECLDSQNIKDSSQKPLACTNFRKIFEKSCPTQWVT 25
F + M+ P ++R+ CW ARD+YW+CLD +N++D+SQ C R FE SCP QW+
Sbjct: 42 FIAVGMAAPSMKERQVCWGARDEYWKCLD-ENLEDASQ----CKKLRSSFESSCPQQWIK 96
Query: 24 HFERKRD 4
+F+++RD
Sbjct: 97 YFDKRRD 103
>BC025793-1|AAH25793.1| 106|Homo sapiens C1orf31 protein protein.
Length = 106
Score = 74.5 bits (175), Expect = 8e-14
Identities = 30/67 (44%), Positives = 46/67 (68%)
Frame = -1
Query: 204 FT*IRMSFPDKEQRKKCWDARDKYWECLDSQNIKDSSQKPLACTNFRKIFEKSCPTQWVT 25
F + M+ P ++R+ CW ARD+YW+CLD +N++D+SQ C R FE SCP QW+
Sbjct: 23 FIAVGMAAPSMKERQVCWGARDEYWKCLD-ENLEDASQ----CKKLRSSFESSCPQQWIK 77
Query: 24 HFERKRD 4
+F+++RD
Sbjct: 78 YFDKRRD 84
>AL355472-3|CAI22929.1| 125|Homo sapiens novel protein protein.
Length = 125
Score = 74.5 bits (175), Expect = 8e-14
Identities = 30/67 (44%), Positives = 46/67 (68%)
Frame = -1
Query: 204 FT*IRMSFPDKEQRKKCWDARDKYWECLDSQNIKDSSQKPLACTNFRKIFEKSCPTQWVT 25
F + M+ P ++R+ CW ARD+YW+CLD +N++D+SQ C R FE SCP QW+
Sbjct: 42 FIAVGMAAPSMKERQVCWGARDEYWKCLD-ENLEDASQ----CKKLRSSFESSCPQQWIK 96
Query: 24 HFERKRD 4
+F+++RD
Sbjct: 97 YFDKRRD 103
>AL355472-2|CAI22928.1| 155|Homo sapiens novel protein protein.
Length = 155
Score = 74.5 bits (175), Expect = 8e-14
Identities = 30/67 (44%), Positives = 46/67 (68%)
Frame = -1
Query: 204 FT*IRMSFPDKEQRKKCWDARDKYWECLDSQNIKDSSQKPLACTNFRKIFEKSCPTQWVT 25
F + M+ P ++R+ CW ARD+YW+CLD +N++D+SQ C R FE SCP QW+
Sbjct: 72 FIAVGMAAPSMKERQVCWGARDEYWKCLD-ENLEDASQ----CKKLRSSFESSCPQQWIK 126
Query: 24 HFERKRD 4
+F+++RD
Sbjct: 127 YFDKRRD 133
>AL355472-4|CAI22930.1| 79|Homo sapiens novel protein protein.
Length = 79
Score = 73.7 bits (173), Expect = 1e-13
Identities = 29/62 (46%), Positives = 44/62 (70%)
Frame = -1
Query: 189 MSFPDKEQRKKCWDARDKYWECLDSQNIKDSSQKPLACTNFRKIFEKSCPTQWVTHFERK 10
M+ P ++R+ CW ARD+YW+CLD +N++D+SQ C R FE SCP QW+ +F+++
Sbjct: 1 MAAPSMKERQVCWGARDEYWKCLD-ENLEDASQ----CKKLRSSFESSCPQQWIKYFDKR 55
Query: 9 RD 4
RD
Sbjct: 56 RD 57
>X54473-1|CAA38352.1| 86|Homo sapiens cytochrome oxidase subunit
VIb protein.
Length = 86
Score = 41.1 bits (92), Expect = 0.001
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = -1
Query: 183 FPDKEQRKKCWDARDKYWECLDSQNIKDSSQKPLACTNFRKIFEKSCPTQWVTHFERKR 7
FP++ Q + CW + C + K C ++++++ CPT WVT ++ +R
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAKGGDIS--VCEWYQRVYQSLCPTSWVTDWDEQR 77
>X13923-1|CAA32114.1| 86|Homo sapiens protein ( Human mRNA for
cytochrome c oxidase subunit VIb (EC 1.9.3.1). ).
Length = 86
Score = 41.1 bits (92), Expect = 0.001
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = -1
Query: 183 FPDKEQRKKCWDARDKYWECLDSQNIKDSSQKPLACTNFRKIFEKSCPTQWVTHFERKR 7
FP++ Q + CW + C + K C ++++++ CPT WVT ++ +R
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAKGGDIS--VCEWYQRVYQSLCPTSWVTDWDEQR 77
>CR542137-1|CAG46934.1| 86|Homo sapiens COX6B protein.
Length = 86
Score = 41.1 bits (92), Expect = 0.001
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = -1
Query: 183 FPDKEQRKKCWDARDKYWECLDSQNIKDSSQKPLACTNFRKIFEKSCPTQWVTHFERKR 7
FP++ Q + CW + C + K C ++++++ CPT WVT ++ +R
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAKGGDIS--VCEWYQRVYQSLCPTSWVTDWDEQR 77
>CR456789-1|CAG33070.1| 86|Homo sapiens COX6B protein.
Length = 86
Score = 41.1 bits (92), Expect = 0.001
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = -1
Query: 183 FPDKEQRKKCWDARDKYWECLDSQNIKDSSQKPLACTNFRKIFEKSCPTQWVTHFERKR 7
FP++ Q + CW + C + K C ++++++ CPT WVT ++ +R
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAKGGDIS--VCEWYQRVYQSLCPTSWVTDWDEQR 77
>BT006945-1|AAP35591.1| 86|Homo sapiens cytochrome c oxidase
subunit VIb protein.
Length = 86
Score = 41.1 bits (92), Expect = 0.001
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = -1
Query: 183 FPDKEQRKKCWDARDKYWECLDSQNIKDSSQKPLACTNFRKIFEKSCPTQWVTHFERKR 7
FP++ Q + CW + C + K C ++++++ CPT WVT ++ +R
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAKGGDIS--VCEWYQRVYQSLCPTSWVTDWDEQR 77
>BC002478-1|AAH02478.1| 86|Homo sapiens cytochrome c oxidase
subunit Vib polypeptide 1 (ubiquitous) protein.
Length = 86
Score = 41.1 bits (92), Expect = 0.001
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = -1
Query: 183 FPDKEQRKKCWDARDKYWECLDSQNIKDSSQKPLACTNFRKIFEKSCPTQWVTHFERKR 7
FP++ Q + CW + C + K C ++++++ CPT WVT ++ +R
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAKGGDIS--VCEWYQRVYQSLCPTSWVTDWDEQR 77
>BC001015-1|AAH01015.1| 86|Homo sapiens cytochrome c oxidase
subunit Vib polypeptide 1 (ubiquitous) protein.
Length = 86
Score = 41.1 bits (92), Expect = 0.001
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = -1
Query: 183 FPDKEQRKKCWDARDKYWECLDSQNIKDSSQKPLACTNFRKIFEKSCPTQWVTHFERKR 7
FP++ Q + CW + C + K C ++++++ CPT WVT ++ +R
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAKGGDIS--VCEWYQRVYQSLCPTSWVTDWDEQR 77
>AC002115-3|AAB57628.1| 86|Homo sapiens COXG protein.
Length = 86
Score = 41.1 bits (92), Expect = 0.001
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = -1
Query: 183 FPDKEQRKKCWDARDKYWECLDSQNIKDSSQKPLACTNFRKIFEKSCPTQWVTHFERKR 7
FP++ Q + CW + C + K C ++++++ CPT WVT ++ +R
Sbjct: 21 FPNQNQTRNCWQNYLDFHRCQKAMTAKGGDIS--VCEWYQRVYQSLCPTSWVTDWDEQR 77
>BC100902-1|AAI00903.1| 88|Homo sapiens COX6B2 protein protein.
Length = 88
Score = 34.7 bits (76), Expect = 0.078
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -1
Query: 183 FPDKEQRKKCWDARDKYWECLDSQNIKDSSQKPLACTNFRKIFEKSCPTQWV 28
FP + Q + C+ Y CL ++ + S +P C + +++ CP WV
Sbjct: 23 FPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQP--CEYYFRVYHSLCPISWV 72
>BC100901-1|AAI00902.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 34.7 bits (76), Expect = 0.078
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -1
Query: 183 FPDKEQRKKCWDARDKYWECLDSQNIKDSSQKPLACTNFRKIFEKSCPTQWV 28
FP + Q + C+ Y CL ++ + S +P C + +++ CP WV
Sbjct: 23 FPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQP--CEYYFRVYHSLCPISWV 72
>BC100900-1|AAI00901.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 34.7 bits (76), Expect = 0.078
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -1
Query: 183 FPDKEQRKKCWDARDKYWECLDSQNIKDSSQKPLACTNFRKIFEKSCPTQWV 28
FP + Q + C+ Y CL ++ + S +P C + +++ CP WV
Sbjct: 23 FPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQP--CEYYFRVYHSLCPISWV 72
>BC100899-1|AAI00900.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 34.7 bits (76), Expect = 0.078
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -1
Query: 183 FPDKEQRKKCWDARDKYWECLDSQNIKDSSQKPLACTNFRKIFEKSCPTQWV 28
FP + Q + C+ Y CL ++ + S +P C + +++ CP WV
Sbjct: 23 FPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQP--CEYYFRVYHSLCPISWV 72
>BC064548-1|AAH64548.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 34.7 bits (76), Expect = 0.078
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -1
Query: 183 FPDKEQRKKCWDARDKYWECLDSQNIKDSSQKPLACTNFRKIFEKSCPTQWV 28
FP + Q + C+ Y CL ++ + S +P C + +++ CP WV
Sbjct: 23 FPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQP--CEYYFRVYHSLCPISWV 72
>BC026123-1|AAH26123.3| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 34.7 bits (76), Expect = 0.078
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -1
Query: 183 FPDKEQRKKCWDARDKYWECLDSQNIKDSSQKPLACTNFRKIFEKSCPTQWV 28
FP + Q + C+ Y CL ++ + S +P C + +++ CP WV
Sbjct: 23 FPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQP--CEYYFRVYHSLCPISWV 72
>AY152398-1|AAN46751.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb testes-specific isoform precursor protein.
Length = 88
Score = 34.7 bits (76), Expect = 0.078
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -1
Query: 183 FPDKEQRKKCWDARDKYWECLDSQNIKDSSQKPLACTNFRKIFEKSCPTQWV 28
FP + Q + C+ Y CL ++ + S +P C + +++ CP WV
Sbjct: 23 FPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQP--CEYYFRVYHSLCPISWV 72
>BC029486-1|AAH29486.1| 207|Homo sapiens TM2 domain containing 1
protein.
Length = 207
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -1
Query: 171 EQRKKCWDARDKYWECLDSQNIKDSSQKPLACTNF 67
E+ KC D + + C D + I D++Q+P+ CTN+
Sbjct: 43 EESLKCEDLKVGQYICKDPK-INDATQEPVNCTNY 76
>AF353990-1|AAK35064.1| 207|Homo sapiens beta-amyloid binding
protein precursor protein.
Length = 207
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -1
Query: 171 EQRKKCWDARDKYWECLDSQNIKDSSQKPLACTNF 67
E+ KC D + + C D + I D++Q+P+ CTN+
Sbjct: 43 EESLKCEDLKVGQYICKDPK-INDATQEPVNCTNY 76
>AY358185-1|AAQ88552.1| 613|Homo sapiens olfactomedin-like protein.
Length = 613
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -2
Query: 275 IKHLNKYLGIYETYR*LCLSFDFNLRR*GCPFLIKSKEKSAGTPEINTGS 126
++HL++ L YE + + L L R G L K + TP TGS
Sbjct: 132 VRHLSEQLRHYENHSAIMLGIKKELSRLGLQLLQKDAAAAPATPATGTGS 181
>AL354928-4|CAI39635.2| 652|Homo sapiens olfactomedin-like 2A
protein.
Length = 652
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -2
Query: 275 IKHLNKYLGIYETYR*LCLSFDFNLRR*GCPFLIKSKEKSAGTPEINTGS 126
++HL++ L YE + + L L R G L K + TP TGS
Sbjct: 171 VRHLSEQLRHYENHSAIMLGIKKELSRLGLQLLQKDAAAAPATPATGTGS 220
>AL354928-3|CAI39634.1| 318|Homo sapiens olfactomedin-like 2A
protein.
Length = 318
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -2
Query: 275 IKHLNKYLGIYETYR*LCLSFDFNLRR*GCPFLIKSKEKSAGTPEINTGS 126
++HL++ L YE + + L L R G L K + TP TGS
Sbjct: 135 VRHLSEQLRHYENHSAIMLGIKKELSRLGLQLLQKDAAAAPATPATGTGS 184
>AK074709-1|BAC11152.1| 353|Homo sapiens protein ( Homo sapiens
cDNA FLJ90228 fis, clone NT2RM2000241. ).
Length = 353
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -2
Query: 275 IKHLNKYLGIYETYR*LCLSFDFNLRR*GCPFLIKSKEKSAGTPEINTGS 126
++HL++ L YE + + L L R G L K + TP TGS
Sbjct: 135 VRHLSEQLRHYENHSAIMLGIKKELSRLGLQLLQKDAAAAPATPATGTGS 184
>AB119055-1|BAD38864.1| 652|Homo sapiens photomedin-1 protein.
Length = 652
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -2
Query: 275 IKHLNKYLGIYETYR*LCLSFDFNLRR*GCPFLIKSKEKSAGTPEINTGS 126
++HL++ L YE + + L L R G L K + TP TGS
Sbjct: 171 VRHLSEQLRHYENHSAIMLGIKKELSRLGLQLLQKDAAAAPATPATGTGS 220
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,965,861
Number of Sequences: 237096
Number of extensions: 831696
Number of successful extensions: 1422
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1402
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1968306988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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