Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_O09
         (345 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75714-9|CAN86912.1|   90|Caenorhabditis elegans Hypothetical pr...    58   2e-09
AF125459-5|AAD12844.1|  345|Caenorhabditis elegans Hypothetical ...    29   1.2  
Z36948-1|CAA85409.1|  180|Caenorhabditis elegans Hypothetical pr...    27   2.7  
U41991-9|AAA83349.1|  297|Caenorhabditis elegans Hypothetical pr...    27   4.8  
U41556-3|AAM51519.1|  378|Caenorhabditis elegans Cysteine protea...    27   4.8  
U41556-2|ABS19475.1|  369|Caenorhabditis elegans Cysteine protea...    27   4.8  
U41556-1|AAK39189.1|  379|Caenorhabditis elegans Cysteine protea...    27   4.8  
L39939-1|AAA98789.1|  379|Caenorhabditis elegans cathepsin B-lik...    27   4.8  
L39894-1|AAA98787.1|  379|Caenorhabditis elegans cathepsin B-lik...    27   4.8  

>Z75714-9|CAN86912.1|   90|Caenorhabditis elegans Hypothetical
           protein ZC434.7b protein.
          Length = 90

 Score = 58.0 bits (134), Expect = 2e-09
 Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
 Frame = -1

Query: 174 KEQRKKCWDARDKYWECLDSQNIKDSSQKPL--ACTNFRKIFEKSCPTQWVTHFERK 10
           K +R+KC++ARD+Y  C+D    +  S+K    +C + RK F+ +CPT WV HF RK
Sbjct: 9   KSERRKCYEARDQYAACIDKFLSQGKSEKEATNSCRSERKNFDGNCPTSWVNHFIRK 65


>AF125459-5|AAD12844.1|  345|Caenorhabditis elegans Hypothetical
           protein Y25C1A.8a protein.
          Length = 345

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = -1

Query: 177 DKEQRKKCWDARDKYWECLDSQNIKDSSQKPLACTNFRK 61
           D+EQ+++    +D  W C+DS+  K + +  L C  + K
Sbjct: 8   DREQKRRA--LKDGEWACVDSKCAKVNEESLLVCDEYGK 44


>Z36948-1|CAA85409.1|  180|Caenorhabditis elegans Hypothetical
           protein D2089.2 protein.
          Length = 180

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = -1

Query: 126 CLDSQNIKDSSQKPLACTNFRKIFEKSCPTQWV 28
           C D+    DS  KP +C+         C  QWV
Sbjct: 28  CFDNDTSSDSLIKPCSCSGTVAYVHNGCLEQWV 60


>U41991-9|AAA83349.1|  297|Caenorhabditis elegans Hypothetical
           protein C42D4.11 protein.
          Length = 297

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -1

Query: 72  NFRKIFEKSCPTQWVTHFERKR 7
           NF     KSCP QW  HF+R R
Sbjct: 119 NFSYSAMKSCPPQW-EHFDRAR 139


>U41556-3|AAM51519.1|  378|Caenorhabditis elegans Cysteine protease
           related protein6, isoform b protein.
          Length = 378

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +2

Query: 173 LSGKDILIYVN*NQNLDKASDRFRIFPNIY 262
           L G D++ YVN NQNL  A  + R F ++Y
Sbjct: 40  LDGDDLIDYVNENQNLWTAKKQ-RRFSSVY 68


>U41556-2|ABS19475.1|  369|Caenorhabditis elegans Cysteine protease
           related protein6, isoform c protein.
          Length = 369

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +2

Query: 173 LSGKDILIYVN*NQNLDKASDRFRIFPNIY 262
           L G D++ YVN NQNL  A  + R F ++Y
Sbjct: 31  LDGDDLIDYVNENQNLWTAKKQ-RRFSSVY 59


>U41556-1|AAK39189.1|  379|Caenorhabditis elegans Cysteine protease
           related protein6, isoform a protein.
          Length = 379

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +2

Query: 173 LSGKDILIYVN*NQNLDKASDRFRIFPNIY 262
           L G D++ YVN NQNL  A  + R F ++Y
Sbjct: 41  LDGDDLIDYVNENQNLWTAKKQ-RRFSSVY 69


>L39939-1|AAA98789.1|  379|Caenorhabditis elegans cathepsin B-like
           cysteine proteinaseprotein.
          Length = 379

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +2

Query: 173 LSGKDILIYVN*NQNLDKASDRFRIFPNIY 262
           L G D++ YVN NQNL  A  + R F ++Y
Sbjct: 41  LDGDDLIDYVNENQNLWTAKKQ-RRFSSVY 69


>L39894-1|AAA98787.1|  379|Caenorhabditis elegans cathepsin B-like
           cysteine proteinaseprotein.
          Length = 379

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +2

Query: 173 LSGKDILIYVN*NQNLDKASDRFRIFPNIY 262
           L G D++ YVN NQNL  A  + R F ++Y
Sbjct: 41  LDGDDLIDYVNENQNLWTAKKQ-RRFSSVY 69


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,342,335
Number of Sequences: 27780
Number of extensions: 142674
Number of successful extensions: 294
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 293
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 451081596
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)