Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_O07
(748 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80442-1|AAB37663.1| 202|Caenorhabditis elegans Proteasome beta... 153 1e-37
Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical pr... 63 2e-10
Z81564-1|CAB04567.1| 284|Caenorhabditis elegans Hypothetical pr... 60 2e-09
L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome bet... 51 8e-07
AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome co... 51 8e-07
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 49 4e-06
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z77668-3|CAI46576.1| 284|Caenorhabditis elegans Hypothetical pr... 32 0.50
Z77655-9|CAI46567.1| 284|Caenorhabditis elegans Hypothetical pr... 32 0.50
AC006603-1|AAF39749.1| 772|Caenorhabditis elegans Hypothetical ... 31 0.87
Z54270-8|CAA91029.2| 301|Caenorhabditis elegans Hypothetical pr... 29 4.6
U58727-2|AAB00582.2| 462|Caenorhabditis elegans Hypothetical pr... 28 6.1
>U80442-1|AAB37663.1| 202|Caenorhabditis elegans Proteasome beta
subunit protein 4 protein.
Length = 202
Score = 153 bits (371), Expect = 1e-37
Identities = 76/191 (39%), Positives = 121/191 (63%), Gaps = 3/191 (1%)
Frame = -3
Query: 587 LLGIQCNDFVMIAADQSNSHSIMIMKDDE-EKIYKISDRLVMGVIGDSGDTNQFAEYIAK 411
L+GI ++V++AAD++ I+ D E +K Y++ +L M IG+ GD QF ++ +
Sbjct: 7 LVGISTENYVILAADKATFAYGAILADSENDKEYRLGKKLTMMCIGEEGDVAQFGDWTKR 66
Query: 410 NIQLYKMRNGYELGPSAAASFTRRNLAEYLRSSTPYFVNVLMGGY-DKENGPELYFMDYL 234
N+QLY +RNGYE+ PS A F RR++AE LRS Y V+VL+GGY DKE+ L +DYL
Sbjct: 67 NLQLYSVRNGYEVSPSCAHHFVRRSIAEGLRSQDHYTVDVLIGGYDDKEDKAFLGSVDYL 126
Query: 233 ASSV-KVPFAAHGYGGYLSLSIMDRYHKKDATETEAYDILKKCVQEVHKRLFVSLPNFQV 57
A+ + + P+ G+ G +IMDR +KKD TE E ++ KC+ E +R ++P ++V
Sbjct: 127 ANGLGQQPYLFRGFCGRFCYAIMDREYKKDMTEAEGLALMNKCIGEAKRRFVANIPGYKV 186
Query: 56 TVVNRDGIKVL 24
++++ G + L
Sbjct: 187 VIIDKKGYRKL 197
>Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical
protein C47B2.4 protein.
Length = 277
Score = 63.3 bits (147), Expect = 2e-10
Identities = 37/153 (24%), Positives = 78/153 (50%)
Frame = -3
Query: 560 VMIAADQSNSHSIMIMKDDEEKIYKISDRLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNG 381
+++ AD + +I EK++K+++ + G + D +Q + ++ N++L ++ G
Sbjct: 58 LVMGADSRATAGNIIADKHCEKVHKLTESIYACGAGTAADLDQVTKMLSGNLRLLELNTG 117
Query: 380 YELGPSAAASFTRRNLAEYLRSSTPYFVNVLMGGYDKENGPELYFMDYLASSVKVPFAAH 201
+ A +++L Y Y +L+GG D GP LY +++ PF A
Sbjct: 118 RKARVITALRQAKQHLFNYQGYIGAY---LLIGGVDP-TGPHLYMCSANGTTMAFPFTAQ 173
Query: 200 GYGGYLSLSIMDRYHKKDATETEAYDILKKCVQ 102
G G Y +++I++R K D T+ EA ++++ ++
Sbjct: 174 GSGSYAAITILERDFKVDMTKDEAEKLVQRALE 206
>Z81564-1|CAB04567.1| 284|Caenorhabditis elegans Hypothetical
protein K05C4.1 protein.
Length = 284
Score = 60.1 bits (139), Expect = 2e-09
Identities = 38/144 (26%), Positives = 66/144 (45%)
Frame = -3
Query: 560 VMIAADQSNSHSIMIMKDDEEKIYKISDRLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNG 381
+++A D S I KI I DR+V + G + D + +AK LY++R
Sbjct: 83 IIVAVDSRASSGEYISSKSVMKILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYELREK 142
Query: 380 YELGPSAAASFTRRNLAEYLRSSTPYFVNVLMGGYDKENGPELYFMDYLASSVKVPFAAH 201
+ SAA+ + L Y V ++ GYDK+ GP+++ +D ++ +
Sbjct: 143 TSITVSAASKYFANTLYGYRGQGLS--VGSMVAGYDKK-GPQIFKVDSEGDRCQLKVCSV 199
Query: 200 GYGGYLSLSIMDRYHKKDATETEA 129
G G + I+D ++K T+ EA
Sbjct: 200 GSGSLNAYGILDNHYKPKMTDDEA 223
>L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome beta
subunit protein 6 protein.
Length = 258
Score = 51.2 bits (117), Expect = 8e-07
Identities = 30/139 (21%), Positives = 62/139 (44%), Gaps = 1/139 (0%)
Frame = -3
Query: 578 IQCNDFVMIAAD-QSNSHSIMIMKDDEEKIYKISDRLVMGVIGDSGDTNQFAEYIAKNIQ 402
I +F ++A+D + + I I+ D EKI ++D +++ G GD Q + + +
Sbjct: 57 ISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQLKKVLQSRLH 116
Query: 401 LYKMRNGYELGPSAAASFTRRNLAEYLRSSTPYFVNVLMGGYDKENGPELYFMDYLASSV 222
Y+ ++ A RNL Y R PY+ ++ G D+ ++ D +
Sbjct: 117 KYRFDYRSDMSVDLCAELLSRNL--YYRRFFPYYTGAILAGIDEHGKGAVFSYDPIGCIE 174
Query: 221 KVPFAAHGYGGYLSLSIMD 165
++ ++A G + + +D
Sbjct: 175 RLGYSASGAAEPMIIPFLD 193
>AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome
component C5 protein.
Length = 258
Score = 51.2 bits (117), Expect = 8e-07
Identities = 30/139 (21%), Positives = 62/139 (44%), Gaps = 1/139 (0%)
Frame = -3
Query: 578 IQCNDFVMIAAD-QSNSHSIMIMKDDEEKIYKISDRLVMGVIGDSGDTNQFAEYIAKNIQ 402
I +F ++A+D + + I I+ D EKI ++D +++ G GD Q + + +
Sbjct: 57 ISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQLKKVLQSRLH 116
Query: 401 LYKMRNGYELGPSAAASFTRRNLAEYLRSSTPYFVNVLMGGYDKENGPELYFMDYLASSV 222
Y+ ++ A RNL Y R PY+ ++ G D+ ++ D +
Sbjct: 117 KYRFDYRSDMSVDLCAELLSRNL--YYRRFFPYYTGAILAGIDEHGKGAVFSYDPIGCIE 174
Query: 221 KVPFAAHGYGGYLSLSIMD 165
++ ++A G + + +D
Sbjct: 175 RLGYSASGAAEPMIIPFLD 193
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 48.8 bits (111), Expect = 4e-06
Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 5/192 (2%)
Frame = -3
Query: 584 LGIQCNDFVMIAADQSNSHSIMIMKDDEEKIYKISDRLVMGVIGDSGDTNQFAEYIAKNI 405
LGI ++ +++AA++ N H ++ EK+Y++SD + V G + D N ++
Sbjct: 35 LGILSSEGIVVAAERKNVHKLLDDSVMTEKVYRLSDNISCTVAGITADANILINHLRWWA 94
Query: 404 QLYKMRNGYELGPSAAASFTRRNLAEY--LRSSTPYFVNVLMGGYDKENGPELYFMDYLA 231
Y+ G E+ Y + P+ V++L G+DK G +LY D
Sbjct: 95 ASYRNSYGEEMPVEQLVQNLCNEKQRYTQIGGKRPFGVSLLYIGWDKHYGYQLYQSDPSG 154
Query: 230 SSVKVPFAAHGYGGYLSLSIMDRYHKKDATETEAYDILKKCVQEVHKRLFVSLPNFQV-- 57
+ G +++++ + +K E EA + ++ + K L V L + +V
Sbjct: 155 NYTGWKATCIGSNHQAAVTLLKQEYKSPNLE-EAKQL---AIKVLWKTLDVKLASEKVEM 210
Query: 56 -TVVNRDGIKVL 24
+ RDG VL
Sbjct: 211 AVLTRRDGKTVL 222
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 38.7 bits (86), Expect = 0.004
Identities = 46/203 (22%), Positives = 83/203 (40%), Gaps = 5/203 (2%)
Frame = -3
Query: 623 YDCKMSNINLQCLLGIQCNDFVMIAADQSNSHSIMIMKDDEEKIYKISDRLVMGVIGDSG 444
Y K N + ++ D +IA + S+ I+ D +Y+IS + IG
Sbjct: 27 YAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSL-IVADTVTSVYQISQSVGCCAIGMIP 85
Query: 443 DTNQFAEYIAKNIQLYKMRNGYELGPSAAASFTRRNLAEYLRSSTPYF---VNVLMGGYD 273
D + +K +NGY++ P + +L +Y + +L YD
Sbjct: 86 DAKFQIKRAQGEAASWKYKNGYDM-PCELLAKKMADLNQYYTQNAEMRSLGCALLFISYD 144
Query: 272 KENGPELYFMDYLASSVKVPFAAHGYGGYLSLSIMDRYHKK--DATETEAYDILKKCVQE 99
E GPE+Y +D + + G + S +++ KK + T TEA ++ + +Q
Sbjct: 145 DEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKKKSELTSTEAIELAIEALQ- 203
Query: 98 VHKRLFVSLPNFQVTVVNRDGIK 30
+ V + +V VV +D K
Sbjct: 204 TSLGIDVRSKDLEVVVVTKDNSK 226
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 38.3 bits (85), Expect = 0.006
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 2/120 (1%)
Frame = -3
Query: 599 NLQCLLGIQCNDFVMIAADQSNSHSIMIMKDDEEKIYKISDRLVMGVIGDSGDTNQFAEY 420
N Q +G++ D V++A + S ++ DD+ K+ +IS + G D +
Sbjct: 30 NGQPSVGLRAKDGVVLATENVGS----VLTDDQPKVEQISKHIGCVYSGMGPDFRILVKK 85
Query: 419 IAKNIQLYKMRNGYELGPSAAASFTRRNLAEYLRSS--TPYFVNVLMGGYDKENGPELYF 246
K Y+M G E+ + + EY +S P+ ++L+ G+DK G L F
Sbjct: 86 ARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEYTQSGGVRPFGASLLIAGWDKNPGRPLLF 145
>Z77668-3|CAI46576.1| 284|Caenorhabditis elegans Hypothetical
protein R11G10.3 protein.
Length = 284
Score = 31.9 bits (69), Expect = 0.50
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +3
Query: 78 NKQSFVNFLNTLLKDVICLCFCSIFFMVTIHNTQT*ISTITMSCKWYL 221
+++SFVN + L VICLC + F+V + T + T++ ++ L
Sbjct: 149 HEESFVNNIQVALSFVICLCLV-VLFLVNRYKTANSVGKSTLTTRYQL 195
>Z77655-9|CAI46567.1| 284|Caenorhabditis elegans Hypothetical
protein R11G10.3 protein.
Length = 284
Score = 31.9 bits (69), Expect = 0.50
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +3
Query: 78 NKQSFVNFLNTLLKDVICLCFCSIFFMVTIHNTQT*ISTITMSCKWYL 221
+++SFVN + L VICLC + F+V + T + T++ ++ L
Sbjct: 149 HEESFVNNIQVALSFVICLCLV-VLFLVNRYKTANSVGKSTLTTRYQL 195
>AC006603-1|AAF39749.1| 772|Caenorhabditis elegans Hypothetical
protein B0524.4 protein.
Length = 772
Score = 31.1 bits (67), Expect = 0.87
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = -3
Query: 197 YGGYLSLSIMDRYHKKDATETEAYDILKKCVQEVHKRLFVSLPNFQVTVVNRDGIKVLPT 18
+ GYL+ + + HK T +A+DILK ++ + K F + + + VLP
Sbjct: 187 FNGYLNAMTLLKKHKDQDTIEKAFDILKASIRAMQKLNFKDVEKYTTDASLKTLDSVLPE 246
Query: 17 MNA 9
+ A
Sbjct: 247 LVA 249
>Z54270-8|CAA91029.2| 301|Caenorhabditis elegans Hypothetical
protein F11C1.4 protein.
Length = 301
Score = 28.7 bits (61), Expect = 4.6
Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 3/111 (2%)
Frame = -3
Query: 470 VMGVIGDSGDTNQFAEYIAKNIQLYKMRNGYELGPSAAASFTRRN---LAEYLRSSTPYF 300
V+G G+ G F + +N+ + R G + + N L LR S +
Sbjct: 24 VLGNPGNDGFYTDFGRRLIRNLIAREERLGTRRVQFVFYTLSHLNHVLLPTSLRCSESHK 83
Query: 299 VNVLMGGYDKENGPELYFMDYLASSVKVPFAAHGYGGYLSLSIMDRYHKKD 147
VN D+ + +YL +V HG G Y+ LSI+ Y K D
Sbjct: 84 VNERFSLADQVQHKLDFVKEYLPRGNRVYMFGHGDGAYMLLSILP-YIKDD 133
>U58727-2|AAB00582.2| 462|Caenorhabditis elegans Hypothetical
protein D1005.2 protein.
Length = 462
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 173 YSNLDIHHNHELQMVPSRLMLNSP*NTVQVHFLYHNHP 286
+S +HHNHEL P + S N+V+V L HP
Sbjct: 372 HSTFKVHHNHELGAPPVISLDPSIYNSVEVVDLKFPHP 409
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,978,698
Number of Sequences: 27780
Number of extensions: 333312
Number of successful extensions: 895
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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