Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_O02
(765 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0201 - 1441063-1443836,1444658-1445758,1446367-1447179,144... 32 0.44
09_04_0559 + 18516732-18516746,18516893-18517330 31 0.76
01_05_0629 + 23809899-23810720 30 1.8
10_08_0015 + 14116129-14116691,14116810-14117128,14117588-141186... 30 2.3
09_04_0507 + 18194320-18195081 29 3.1
08_02_1034 + 23823194-23823307,23823399-23823620,23823984-238243... 29 3.1
10_08_0491 - 18283404-18283482,18283590-18283658,18283767-182838... 29 5.4
03_05_0478 - 24712157-24712177,24712206-24712260,24712377-247124... 29 5.4
12_01_0419 - 3316866-3318172,3318249-3318360 28 7.1
01_06_0765 - 31808775-31809443,31809547-31809703,31809777-318098... 28 7.1
03_06_0157 - 32039020-32039175,32039267-32039338,32039478-320396... 28 9.4
>05_01_0201 -
1441063-1443836,1444658-1445758,1446367-1447179,
1447386-1447440
Length = 1580
Score = 32.3 bits (70), Expect = 0.44
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = -1
Query: 723 EDSKTEVQATVAEISKEXKPSATDAEGSADSAAIIPXMVKKIDLAPTVESDAAAVPE--- 553
E K + A AE E P+AT+ +G + A P + +PT + A P
Sbjct: 213 EKQKVQGPAESAEAVAEGSPTATEQKGITHTPAPAPCVSPVAAPSPTPCASPVAAPSPAP 272
Query: 552 IKTPEAADAP-KLADNPVDEDKPADI 478
+P AA +P +PV EDK ++
Sbjct: 273 CVSPVAAPSPAPPCKSPVPEDKSCEL 298
>09_04_0559 + 18516732-18516746,18516893-18517330
Length = 150
Score = 31.5 bits (68), Expect = 0.76
Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
Frame = -1
Query: 744 EGPXGQPEDSKTEVQATVAEISKEXKPSATDAEGSADSAAIIPXMVKKIDL-APTVESDA 568
E + ++++ AE KE +P + E + P + A E A
Sbjct: 53 EAEVAETKEAEPAAAEPAAEEVKEAEPEPAEPEAEPAKEEVAPEPAAAAEAEAKEAEPAA 112
Query: 567 AAVPEIKTPEAADAPKLADNPVDEDKP 487
E+K EAA AP + V+E P
Sbjct: 113 QVAEEVKEEEAAPAPAAEEVKVEEAAP 139
>01_05_0629 + 23809899-23810720
Length = 273
Score = 30.3 bits (65), Expect = 1.8
Identities = 25/77 (32%), Positives = 32/77 (41%)
Frame = -1
Query: 723 EDSKTEVQATVAEISKEXKPSATDAEGSADSAAIIPXMVKKIDLAPTVESDAAAVPEIKT 544
E S+ + AT A E P+ATDA S S A D + E+D AA +
Sbjct: 99 EPSEADPAATDASEPSEADPAATDA--SEPSEADPAPRATSADASEPSEADPAATDASEP 156
Query: 543 PEAADAPKLADNPVDED 493
EA A A P + D
Sbjct: 157 SEADPAATDASEPSEAD 173
>10_08_0015 +
14116129-14116691,14116810-14117128,14117588-14118664,
14118754-14119056
Length = 753
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = -1
Query: 729 QPEDSKTEVQATVAEISKEXKPSATDAEGSADSAAIIPXMVKKIDLAPTVESDAAAVPEI 550
+P D +TE++ TV ++ E + G D+ + IDL SD A PEI
Sbjct: 49 EPNDGETEIETTVDDVLSESTHEQVENHGDGDN---VDDSSVHIDLD---SSDTAFQPEI 102
Query: 549 KTPEAADA 526
P D+
Sbjct: 103 FDPRCWDS 110
>09_04_0507 + 18194320-18195081
Length = 253
Score = 29.5 bits (63), Expect = 3.1
Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 5/95 (5%)
Frame = -1
Query: 765 KSADIKVEGPXGQPEDSKTEVQATVAEISKEXKPSATDA-----EGSADSAAIIPXMVKK 601
+ A+ + E P G P+ E + +E S E +PSA A G + A
Sbjct: 133 EEAEGEEEAPAGAPDAEAEEAASGPSEASSE-EPSAAAAAAPEESGGGEEAEPASGEAPT 191
Query: 600 IDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDE 496
+ A + AAV + P P AD DE
Sbjct: 192 AEAATAADVSPAAVTVSEGPAEGPGPSAADEEEDE 226
>08_02_1034 +
23823194-23823307,23823399-23823620,23823984-23824309,
23824648-23824777,23825145-23825441,23825550-23825815,
23827835-23828333,23828902-23828993,23829571-23829735,
23829817-23830204,23830275-23830393,23830494-23830524,
23830675-23830880,23830970-23831014,23831120-23831201,
23832210-23832398,23834499-23834602,23834669-23834759,
23835097-23835225,23835425-23835556,23835779-23835949,
23836143-23836171,23836214-23836301,23836313-23836391,
23836666-23836844
Length = 1390
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = +2
Query: 125 TPLSLTWGSFTHICYS*SLALAAEHELM 208
TPL L WGSF CY SL EH M
Sbjct: 236 TPLQLQWGSFQSYCYR-SLIDGMEHIAM 262
>10_08_0491 -
18283404-18283482,18283590-18283658,18283767-18283883,
18283953-18284068,18284149-18284223,18284248-18284430,
18284530-18284591,18284668-18285606,18285723-18285846,
18285917-18286060,18286151-18286225,18286359-18286382,
18287025-18287095,18287305-18287407,18287555-18287781,
18287910-18288027,18288220-18288311,18288793-18288874
Length = 899
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/87 (22%), Positives = 35/87 (40%)
Frame = -1
Query: 750 KVEGPXGQPEDSKTEVQATVAEISKEXKPSATDAEGSADSAAIIPXMVKKIDLAPTVESD 571
KV+ G + V + K SA +EGS+ ++P + K+D P +
Sbjct: 437 KVDLSIGARAFHRNSVPSVAPTNRSRSKISAYSSEGSSFIPVVVPRHIPKVDSGPNLSKV 496
Query: 570 AAAVPEIKTPEAADAPKLADNPVDEDK 490
I P+ + LA + ++DK
Sbjct: 497 LTTDLTIVEPQDIERGGLAVDCGEDDK 523
>03_05_0478 -
24712157-24712177,24712206-24712260,24712377-24712473,
24712558-24713302,24713822-24714189,24714279-24714419,
24715480-24715849
Length = 598
Score = 28.7 bits (61), Expect = 5.4
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = -1
Query: 717 SKTEVQATVAEISKEXKPSATDAEGSADSAAIIPXMVKKIDLAPTVESDAAAVPEIKTPE 538
S A A+ S E P A++ + S +IP LAP S AA+ E+ E
Sbjct: 53 SSAAAAAAQAQASSEGSPPASELSPGSLSPVMIPPPRHADHLAPGSPSPAASPSELGDDE 112
Query: 537 A-ADAPKLADNPVDEDKPADI 478
+ + AP A+ + + A+I
Sbjct: 113 SWSRAPSAAELESNNNDLAEI 133
>12_01_0419 - 3316866-3318172,3318249-3318360
Length = 472
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/71 (26%), Positives = 28/71 (39%)
Frame = -1
Query: 699 ATVAEISKEXKPSATDAEGSADSAAIIPXMVKKIDLAPTVESDAAAVPEIKTPEAADAPK 520
ATV E + P+A + A P + P E AA PE + P+ P
Sbjct: 306 ATVDEPEQPKPPAAVEPPVQEPPAEETPTATEPEPEPPAAEEPPAAEPE-QEPQPETPPV 364
Query: 519 LADNPVDEDKP 487
++ P +E P
Sbjct: 365 ESETPAEEQAP 375
>01_06_0765 -
31808775-31809443,31809547-31809703,31809777-31809894,
31810170-31810308
Length = 360
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/76 (22%), Positives = 32/76 (42%)
Frame = -1
Query: 714 KTEVQATVAEISKEXKPSATDAEGSADSAAIIPXMVKKIDLAPTVESDAAAVPEIKTPEA 535
+T++ E+ K + AT D+ + K++ + S AAA P +P A
Sbjct: 150 ETKLGKVQDELKKLREQLATAEAAKKDAQVALEEAKKRVGTKGSPASAAAASPRSPSPVA 209
Query: 534 ADAPKLADNPVDEDKP 487
+ PK + + +P
Sbjct: 210 VETPKKTEQQLKVTEP 225
>03_06_0157 -
32039020-32039175,32039267-32039338,32039478-32039602,
32039678-32040559,32040623-32040692,32041248-32041739,
32041985-32042044,32042541-32042618,32043322-32044344
Length = 985
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -1
Query: 756 DIKVEGPXGQPEDSKTEVQATVAEISKEXKPSATDAEGSADSAAII 619
D++ + G+ E+ + EVQ V E +P DAEG+A A ++
Sbjct: 260 DVEEQKGEGE-EEMEEEVQVEVQEKRGRGRPRKADAEGNALQARVL 304
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,464,618
Number of Sequences: 37544
Number of extensions: 233243
Number of successful extensions: 714
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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