Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_O02
(765 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical pr... 31 0.90
AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein. 31 1.2
AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein. 31 1.2
AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cel... 31 1.2
AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cel... 31 1.2
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical ... 30 2.1
U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical pr... 29 2.7
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z68117-4|CAA92180.1| 589|Caenorhabditis elegans Hypothetical pr... 28 8.4
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 28 8.4
AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical ... 28 8.4
>U80442-4|AAB37667.1| 226|Caenorhabditis elegans Hypothetical
protein T20F5.5 protein.
Length = 226
Score = 31.1 bits (67), Expect = 0.90
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = -1
Query: 765 KSADIKVEGPXGQPEDSK-TEVQATVAEISKEXKPSATDAEGSADSAAIIPXMVKKIDLA 589
KSA K+ P + ED++ T+ A+ E S + KP T E SAD + + + LA
Sbjct: 66 KSASKKLRVPSKESEDTQPTKSDASQTEKSTK-KPPVTLVESSADVTTAVESISSQQQLA 124
Query: 588 PTVESDAAAVPEIKTPEAADAPKLADNPVDE-DKPAD 481
P AA V + +A+ AP V E +K AD
Sbjct: 125 P-----AAPVAPPQLTQASPAPVAPAVLVPEKEKTAD 156
>AY818713-1|AAX35669.1| 691|Caenorhabditis elegans LIN-65S protein.
Length = 691
Score = 30.7 bits (66), Expect = 1.2
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Frame = -1
Query: 762 SADIKVEGPXGQPEDSKTEVQATVAEISKEXKPSATDAEGSADSAAIIPXMVKKIDLAPT 583
SA + P+ EVQ V + S SA +E S SA +P + D
Sbjct: 62 SAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEVPGSTEAQDAQDV 120
Query: 582 VES----DAAAVPEIKTPEAADAPKLADNPVDED 493
+S DA+A + PEA +AP++A +DE+
Sbjct: 121 PDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEE 153
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/73 (23%), Positives = 29/73 (39%)
Frame = -1
Query: 723 EDSKTEVQATVAEISKEXKPSATDAEGSADSAAIIPXMVKKIDLAPTVESDAAAVPEIKT 544
+D T V ++ ++ + E + AA P AP E+ A+ P+ +
Sbjct: 19 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 78
Query: 543 PEAADAPKLADNP 505
PE D P + P
Sbjct: 79 PEVQDVPDSSGAP 91
>AY818712-1|AAX35668.1| 728|Caenorhabditis elegans LIN-65L protein.
Length = 728
Score = 30.7 bits (66), Expect = 1.2
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Frame = -1
Query: 762 SADIKVEGPXGQPEDSKTEVQATVAEISKEXKPSATDAEGSADSAAIIPXMVKKIDLAPT 583
SA + P+ EVQ V + S SA +E S SA +P + D
Sbjct: 99 SAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEVPGSTEAQDAQDV 157
Query: 582 VES----DAAAVPEIKTPEAADAPKLADNPVDED 493
+S DA+A + PEA +AP++A +DE+
Sbjct: 158 PDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEE 190
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/73 (23%), Positives = 29/73 (39%)
Frame = -1
Query: 723 EDSKTEVQATVAEISKEXKPSATDAEGSADSAAIIPXMVKKIDLAPTVESDAAAVPEIKT 544
+D T V ++ ++ + E + AA P AP E+ A+ P+ +
Sbjct: 56 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 115
Query: 543 PEAADAPKLADNP 505
PE D P + P
Sbjct: 116 PEVQDVPDSSGAP 128
>AC025726-22|AAN73851.2| 512|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform b protein.
Length = 512
Score = 30.7 bits (66), Expect = 1.2
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Frame = -1
Query: 762 SADIKVEGPXGQPEDSKTEVQATVAEISKEXKPSATDAEGSADSAAIIPXMVKKIDLAPT 583
SA + P+ EVQ V + S SA +E S SA +P + D
Sbjct: 99 SAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEVPGSTEAQDAQDV 157
Query: 582 VES----DAAAVPEIKTPEAADAPKLADNPVDED 493
+S DA+A + PEA +AP++A +DE+
Sbjct: 158 PDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEE 190
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/73 (23%), Positives = 29/73 (39%)
Frame = -1
Query: 723 EDSKTEVQATVAEISKEXKPSATDAEGSADSAAIIPXMVKKIDLAPTVESDAAAVPEIKT 544
+D T V ++ ++ + E + AA P AP E+ A+ P+ +
Sbjct: 56 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 115
Query: 543 PEAADAPKLADNP 505
PE D P + P
Sbjct: 116 PEVQDVPDSSGAP 128
>AC025726-21|AAK73935.3| 728|Caenorhabditis elegans Abnormal cell
lineage protein 65,isoform a protein.
Length = 728
Score = 30.7 bits (66), Expect = 1.2
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Frame = -1
Query: 762 SADIKVEGPXGQPEDSKTEVQATVAEISKEXKPSATDAEGSADSAAIIPXMVKKIDLAPT 583
SA + P+ EVQ V + S SA +E S SA +P + D
Sbjct: 99 SAPAQEASEASAPDQEAPEVQ-DVPDSSGAPDASAQASEASDASAPEVPGSTEAQDAQDV 157
Query: 582 VES----DAAAVPEIKTPEAADAPKLADNPVDED 493
+S DA+A + PEA +AP++A +DE+
Sbjct: 158 PDSLGASDASAQEIPEAPEAPEAPEIAAE-IDEE 190
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/73 (23%), Positives = 29/73 (39%)
Frame = -1
Query: 723 EDSKTEVQATVAEISKEXKPSATDAEGSADSAAIIPXMVKKIDLAPTVESDAAAVPEIKT 544
+D T V ++ ++ + E + AA P AP E+ A+ P+ +
Sbjct: 56 DDDDTPEPILVIDMDEDEDVTTDGPESQEELAADAPAPGAPEASAPAQEASEASAPDQEA 115
Query: 543 PEAADAPKLADNP 505
PE D P + P
Sbjct: 116 PEVQDVPDSSGAP 128
>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical
protein H03E18.1 protein.
Length = 1147
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/92 (26%), Positives = 38/92 (41%)
Frame = -1
Query: 765 KSADIKVEGPXGQPEDSKTEVQATVAEISKEXKPSATDAEGSADSAAIIPXMVKKIDLAP 586
K D K E P +P+ + E + KP +T + + +AA K+ P
Sbjct: 344 KKPDTKKETPTKKPKVELVTAKTVEGEKKETKKPKSTTKKPTKTAAA----STKR---PP 396
Query: 585 TVESDAAAVPEIKTPEAADAPKLADNPVDEDK 490
T E A E+K+ AA P ++ P D+
Sbjct: 397 TTEKPTATTEEVKSTTAAAKP--SERPTGHDE 426
>AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical
protein M70.1 protein.
Length = 931
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -1
Query: 606 KKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADI 478
KK D P+ VP TP+ A P P ++KP D+
Sbjct: 812 KKKDTKPSAPKPKPDVPVNPTPQTAKVPVAPAPPAKDEKPKDV 854
>U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical
protein F32E10.6 protein.
Length = 374
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/92 (25%), Positives = 40/92 (43%)
Frame = -1
Query: 765 KSADIKVEGPXGQPEDSKTEVQATVAEISKEXKPSATDAEGSADSAAIIPXMVKKIDLAP 586
KSA K + + E+ + + + + + SK K +A+D + + A K P
Sbjct: 191 KSAKSKDDDSSDEEEEEEVK-EKSPKKSSKSTKRAASDDDEEEEPVATKKSKKSKRAETP 249
Query: 585 TVESDAAAVPEIKTPEAADAPKLADNPVDEDK 490
E D +KTP+ K A+ P +ED+
Sbjct: 250 EEEDDEEE-EVVKTPKKTKKSKRAETPEEEDE 280
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = -1
Query: 723 EDSKTEVQATVAEISKEXKPSATDAEGSADSAAIIPXMVKKIDLAPTVESDAAAVPEIKT 544
E+ K ++Q+ A D S D +IP VK I PT+ + V +++
Sbjct: 445 EEEKDKLQSAAAPEDDSPASPPMDCPASPDMVPVIPQTVKIIPTVPTIPLETQDV-DMRE 503
Query: 543 PEA 535
P A
Sbjct: 504 PSA 506
>Z37093-3|CAA85465.1| 448|Caenorhabditis elegans Hypothetical
protein ZK669.4 protein.
Length = 448
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = -1
Query: 756 DIKVEGPXGQPEDSKTEVQATVAEISKEXKPSATDAEGSADSAAIIP 616
D+++EG +PE K E ++ E K P A ++ S P
Sbjct: 103 DVEIEGNVEEPEQPKKEAASSSPEAPKSSAPKAPESAHSEGKVLATP 149
>Z73102-6|CAA97412.1| 522|Caenorhabditis elegans Hypothetical
protein B0035.5 protein.
Length = 522
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = -1
Query: 669 KPSATDAEGSADSAAIIPXMVKKIDLAPTVESDAAAVPEIKTPEAADAPKLADN-PVDED 493
KP++ +AE D + K ++L V A PE PEA+ K + P D
Sbjct: 281 KPASLNAEDIRDEKVKVLKAAKVVELKDVVVGQYIASPEFDHPEASQGYKDDKSVPADST 340
Query: 492 KP 487
P
Sbjct: 341 TP 342
>Z68117-4|CAA92180.1| 589|Caenorhabditis elegans Hypothetical
protein F45E6.2 protein.
Length = 589
Score = 27.9 bits (59), Expect = 8.4
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Frame = -2
Query: 338 PQKVRNHLTNPNLKKTNLR*TAEALSGGRVLTVFDTRPLLAANTLTRAPL---PTREIN- 171
P V N+L N T+ GRV+T D+ P+ A T+ P+ P N
Sbjct: 342 PFNVDNNLNINNQIMAISNETSMVARHGRVITYEDSAPV--AKIPTQQPIHNYPNSTQND 399
Query: 170 CSIYV*NYPM*VRVAFSTPRWITVYFLD 87
C +Y N +RV RW+ V+ D
Sbjct: 400 CDMYKLNATETIRVNNDIERWVQVHSFD 427
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 27.9 bits (59), Expect = 8.4
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
Frame = -1
Query: 720 DSKTEVQATVAEISKEXKPSA--TDAEGSADSAAIIPXMVKKIDLAPTVESDAAAVPEIK 547
DS AT S E +A TD+ SAD+ A + A + E+ A + +
Sbjct: 311 DSAGGDAATAPAPSSEAADAAAPTDSAASADTTAALVDTSSSEHAAESTEAPATDIAATE 370
Query: 546 TPEAADAP-KLADNPVDEDKPADI 478
T A P +AD D P+ I
Sbjct: 371 TTPAPSVPAPVADAAAGYDSPSSI 394
>AC024807-1|AAF59529.5| 704|Caenorhabditis elegans Hypothetical
protein Y53G8AL.1 protein.
Length = 704
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -1
Query: 609 VKKIDLAPTVESDAAAVPEIKTPEAADAPKLADNPVDEDKPADI 478
V +DL T E+ +PEI TP D+ + +N V+ + ++I
Sbjct: 289 VPSLDLEETTENPE--IPEISTPREEDSAENLENLVENSEKSEI 330
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,185,858
Number of Sequences: 27780
Number of extensions: 196275
Number of successful extensions: 556
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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