Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_N24
         (585 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.   265   3e-73
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    33   0.002

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score =  265 bits (649), Expect = 3e-73
 Identities = 122/153 (79%), Positives = 135/153 (88%)
 Frame = -1

Query: 585 WPTGRGXYHNENKTFLVWCNEEDHLRIISMQMGGDLQQVYKRLVSAVNEIEKKIPFSHHD 406
           WPTGRG YHN++KTFLVWCNEEDHLRIISMQMGGDL QVY+RLV AVNEIEK++ FSH+D
Sbjct: 203 WPTGRGIYHNDDKTFLVWCNEEDHLRIISMQMGGDLGQVYRRLVHAVNEIEKRLLFSHND 262

Query: 405 RLGFLTFCPTNLGTTVRASVHIXXXXXXXXXXXLEEVASKYHLQVRGTRGEHTEAEGGVY 226
           RLGFLTFCPTNLGTTVRASVHI           LEE+A K++LQVRGTRGEHTEAEGG+Y
Sbjct: 263 RLGFLTFCPTNLGTTVRASVHIKLPKLAANRAKLEEIAGKFNLQVRGTRGEHTEAEGGIY 322

Query: 225 DISNKRRMGLTEYDAVKEMYDGIAELIKIEKSL 127
           DISNKRR+GLTEY AVKEM+DGIAELIK+EK L
Sbjct: 323 DISNKRRLGLTEYQAVKEMHDGIAELIKLEKEL 355


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 33.5 bits (73), Expect = 0.002
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = -1

Query: 585 WPTGRGXYHNENKT 544
           WPTGRG YHN++KT
Sbjct: 187 WPTGRGIYHNDDKT 200


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,561
Number of Sequences: 438
Number of extensions: 2040
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)