Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_N21
         (666 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.5  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    23   2.6  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   4.6  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   6.0  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   8.0  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 10  QMSHQILHXNQSSHP 54
           Q  HQ LH +QS+HP
Sbjct: 808 QPPHQQLHHHQSTHP 822


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -2

Query: 269 KNQPYLVSQYRLKVYLSLIR 210
           KN P+ V Q+R K +++++R
Sbjct: 64  KNYPFDVDQWRDKTFVTILR 83


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -1

Query: 516 EGYVPQEEVPLYESKGKQFRARQNDGLPVG 427
           E +   EE  L  SK K+  +  ND LP+G
Sbjct: 440 EAHWELEEESLQGSKIKESNSCSNDQLPMG 469


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 1   HAHQMSHQILHXNQS 45
           + HQ SH  LH N S
Sbjct: 804 YGHQQSHHGLHINSS 818


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -3

Query: 625 YYNVNTNG 602
           YYNVN+NG
Sbjct: 455 YYNVNSNG 462


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,990
Number of Sequences: 438
Number of extensions: 2760
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)