Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_N19
         (884 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X76112-1|CAA53718.1|  300|Caenorhabditis elegans ADP/ATP translo...    56   4e-08
Z82059-6|CAB04874.1|  300|Caenorhabditis elegans Hypothetical pr...    53   2e-07
Z68218-2|CAA92472.1|  313|Caenorhabditis elegans Hypothetical pr...    52   4e-07
U80931-5|AAB38001.1|  313|Caenorhabditis elegans Hypothetical pr...    52   4e-07
AF003141-4|AAK21485.1|  300|Caenorhabditis elegans Hypothetical ...    44   1e-04
Z68882-2|CAA93110.1|  306|Caenorhabditis elegans Hypothetical pr...    39   0.004
U64842-4|AAB37086.2|  306|Caenorhabditis elegans Hypothetical pr...    39   0.004
Z49207-2|CAA89069.1|  298|Caenorhabditis elegans Hypothetical pr...    34   0.12 
Z81577-1|CAB04651.3|  289|Caenorhabditis elegans Hypothetical pr...    33   0.36 
Z99288-8|CAB16550.1|  231|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>X76112-1|CAA53718.1|  300|Caenorhabditis elegans ADP/ATP
           translocase protein.
          Length = 300

 Score = 55.6 bits (128), Expect = 4e-08
 Identities = 25/36 (69%), Positives = 28/36 (77%)
 Frame = -2

Query: 871 PDRGTSAXFKGAFSNVLRGTGGAFVLVLYDEIKKVL 764
           P+ G SA FKGA SNV RGTGGA VL +YDEI+K L
Sbjct: 265 PNEGMSAMFKGALSNVFRGTGGALVLAIYDEIQKFL 300


>Z82059-6|CAB04874.1|  300|Caenorhabditis elegans Hypothetical
           protein T27E9.1a protein.
          Length = 300

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 24/37 (64%), Positives = 28/37 (75%)
 Frame = -2

Query: 874 LPDRGTSAXFKGAFSNVLRGTGGAFVLVLYDEIKKVL 764
           + + G SA FKGA SNV RGTGGA VL +YDEI+K L
Sbjct: 264 IQNEGMSAMFKGALSNVFRGTGGALVLAIYDEIQKFL 300


>Z68218-2|CAA92472.1|  313|Caenorhabditis elegans Hypothetical
           protein K01H12.2 protein.
          Length = 313

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 23/37 (62%), Positives = 28/37 (75%)
 Frame = -2

Query: 874 LPDRGTSAXFKGAFSNVLRGTGGAFVLVLYDEIKKVL 764
           + + G SA FKGA SNV RGTGGA VL +YDEI+K +
Sbjct: 277 IKNEGMSAMFKGALSNVFRGTGGALVLAIYDEIQKFI 313


>U80931-5|AAB38001.1|  313|Caenorhabditis elegans Hypothetical
           protein T01B11.4 protein.
          Length = 313

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 23/37 (62%), Positives = 28/37 (75%)
 Frame = -2

Query: 874 LPDRGTSAXFKGAFSNVLRGTGGAFVLVLYDEIKKVL 764
           + + G SA FKGA SNV RGTGGA VL +YDEI+K +
Sbjct: 277 IKNEGMSAMFKGALSNVFRGTGGALVLAIYDEIQKFI 313


>AF003141-4|AAK21485.1|  300|Caenorhabditis elegans Hypothetical
           protein W02D3.6 protein.
          Length = 300

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 18/35 (51%), Positives = 25/35 (71%)
 Frame = -2

Query: 868 DRGTSAXFKGAFSNVLRGTGGAFVLVLYDEIKKVL 764
           + G +A +KG  SNV R TGGA VL +YDEI+ ++
Sbjct: 266 NEGITALYKGGLSNVFRATGGALVLTIYDEIQHLI 300


>Z68882-2|CAA93110.1|  306|Caenorhabditis elegans Hypothetical
           protein C47E12.2 protein.
          Length = 306

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = -2

Query: 868 DRGTSAXFKGAFSNVLRGTGGAFVLVLYDEIKK 770
           + G    +KGA +N+ R  GGA V+ LY+EI K
Sbjct: 272 EEGVRGLYKGALANIFRSAGGALVMALYEEIHK 304


>U64842-4|AAB37086.2|  306|Caenorhabditis elegans Hypothetical
           protein F25B4.7 protein.
          Length = 306

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 16/33 (48%), Positives = 22/33 (66%)
 Frame = -2

Query: 862 GTSAXFKGAFSNVLRGTGGAFVLVLYDEIKKVL 764
           G  A F GA  N +RGTG A VL +Y+E++K +
Sbjct: 274 GPKAFFHGALVNAIRGTGAALVLAIYNELQKYM 306


>Z49207-2|CAA89069.1|  298|Caenorhabditis elegans Hypothetical
           protein R07E3.4 protein.
          Length = 298

 Score = 34.3 bits (75), Expect = 0.12
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 862 GTSAXFKGAFSNVLRGTGGAFVLVLYDEIKKVL 764
           G +  ++GA +N LR TGGA ++  Y E  K +
Sbjct: 266 GINGFYRGALTNSLRSTGGALIITFYYEFSKYM 298


>Z81577-1|CAB04651.3|  289|Caenorhabditis elegans Hypothetical
           protein R11.1 protein.
          Length = 289

 Score = 32.7 bits (71), Expect = 0.36
 Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -2

Query: 868 DRGTSAXFKGAFSNVLR-GTGGAFVLVLYDEI 776
           + G  A +KG    V+R G GGA +L++YDE+
Sbjct: 250 EEGFGALYKGLLPKVMRLGPGGAVMLIVYDEV 281


>Z99288-8|CAB16550.1|  231|Caenorhabditis elegans Hypothetical
           protein ZK262.9 protein.
          Length = 231

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +3

Query: 801 KAPPVPLRTLEKAPLXKAEVPRSG 872
           KAPPVPL+  EK     A+VP  G
Sbjct: 22  KAPPVPLKKEEKPVQSSAKVPTMG 45


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,954,788
Number of Sequences: 27780
Number of extensions: 355568
Number of successful extensions: 575
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)