Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_N16
         (649 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006675-9|AAK84553.1|  431|Caenorhabditis elegans Hypothetical ...    30   1.2  
Z77657-7|CAH60768.1|  320|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl...    28   5.0  
Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>AC006675-9|AAK84553.1|  431|Caenorhabditis elegans Hypothetical
           protein M02H5.3 protein.
          Length = 431

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 539 NNVCNLNSSDYINCMKC 589
           NNVCN + + Y++C KC
Sbjct: 74  NNVCNFDKNGYVSCKKC 90


>Z77657-7|CAH60768.1|  320|Caenorhabditis elegans Hypothetical
           protein F08H9.12 protein.
          Length = 320

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 20/90 (22%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
 Frame = +2

Query: 329 NRKHATSLLIQY--LFISNFIFSI*RYLIHLFICAVPLXXXXXXXXXCY*KN-----MLI 487
           ++ + TS++I +  +F+ ++IF + + +IH+ +  + +             N     + +
Sbjct: 84  SQAYKTSVIISFSLIFVESYIFHVIQQIIHILLFLLAIANSIKYLLTLKFSNSQIFLLNL 143

Query: 488 ITRLNV*IFSKIKQFFINNVCNLNSSDYIN 577
           + +LNV + S  K F +  +C LNS  Y +
Sbjct: 144 VKKLNVVLIS--KDFLLLFLCYLNSIQYFS 171


>AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase
           protein 2 protein.
          Length = 1080

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -2

Query: 423 HINKCIKYLYIENIKFEMNKYCINRDVACFRLYN 322
           H N C+ +  I N K   +++  NR + C RL N
Sbjct: 845 HENVCVMFASIPNFKDFWSEWDTNRKLECLRLLN 878


>Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical
           protein M18.5 protein.
          Length = 1134

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +2

Query: 464 CY*KNMLIITRLNV*IFSKIKQFFINNVCNLNSSDYINCM 583
           C  + ++I +     +FS +    ++ VC+L+SS Y +C+
Sbjct: 654 CSDRPVIIFSASKKLVFSNVNVKLVDTVCSLSSSAYRDCL 693


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,647,705
Number of Sequences: 27780
Number of extensions: 164432
Number of successful extensions: 218
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 218
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)