Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_N15
         (623 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0318 - 21999640-21999705,21999706-21999768,21999822-219998...    31   0.56 
03_05_1096 - 30364144-30365310,30365825-30365971,30366087-303663...    30   1.7  

>02_04_0318 -
           21999640-21999705,21999706-21999768,21999822-21999884,
           21999938-22000000,22001097-22001141,22001914-22002325,
           22003313-22003475,22004086-22004132,22004458-22004564,
           22004651-22004684,22004754-22004807,22005599-22005723
          Length = 413

 Score = 31.5 bits (68), Expect = 0.56
 Identities = 23/72 (31%), Positives = 36/72 (50%)
 Frame = -3

Query: 582 VRRPNLVRCSVLLLTYK*ILIYRCSFFIRIMNSCLSCQNNNSEHMNKTVLSQTVLLFI*T 403
           VR+  +V   VL +    + +Y  SF+    NS L     N + +  ++L+QT LLF   
Sbjct: 41  VRQEVIVTTLVLSIEVAKVWLYVQSFYWWQKNSLLQISYKNLDSLTFSILNQTKLLFT-A 99

Query: 402 FRTIVINVYTSF 367
           F T +I  +T F
Sbjct: 100 FFTYLILGFTMF 111


>03_05_1096 - 30364144-30365310,30365825-30365971,30366087-30366393,
            30366541-30366849,30367544-30370567,30370640-30372290,
            30372373-30373463,30373544-30373646,30373737-30374439,
            30374654-30375783,30375913-30376027,30376504-30376695,
            30377443-30377616,30378438-30378494,30378581-30378716,
            30378842-30378927,30379023-30379092,30379993-30380021,
            30380444-30380456,30380762-30381006
          Length = 3582

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -3

Query: 528  ILIYRCSFFIRIMNSCLSCQNNNSEHMNKTVLSQTV 421
            I + + +F   IM S L+ QNNN  H+N T+++  V
Sbjct: 1823 IAMAKATFDSLIMKSMLAHQNNNLSHLNGTLVADLV 1858


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,096,179
Number of Sequences: 37544
Number of extensions: 163237
Number of successful extensions: 222
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)