SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_N08
         (755 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC010744-1|AAH10744.1|   89|Homo sapiens dynein, light chain, LC...   167   3e-41
AF112997-1|AAP97230.1|   89|Homo sapiens protein inhibitor of ne...   167   3e-41
U32944-1|AAB04149.1|   89|Homo sapiens cytoplasmic dynein light ...   165   2e-40
CR542128-1|CAG46925.1|   89|Homo sapiens DNCL1 protein.               165   2e-40
CR407672-1|CAG28600.1|   89|Homo sapiens DNCL1 protein.               165   2e-40
BC104245-1|AAI04246.1|   89|Homo sapiens dynein, light chain, LC...   165   2e-40
BC104244-1|AAI04245.1|   89|Homo sapiens dynein, light chain, LC...   165   2e-40
BC100289-1|AAI00290.1|   89|Homo sapiens dynein, light chain, LC...   165   2e-40
CR542177-1|CAG46974.1|  105|Homo sapiens DNAL4 protein.                65   3e-10
CR456487-1|CAG30373.1|  105|Homo sapiens DNAL4 protein.                65   3e-10
BT009847-1|AAP88849.1|  105|Homo sapiens dynein, axonemal, light...    65   3e-10
BC002968-1|AAH02968.1|  105|Homo sapiens dynein, axonemal, light...    65   3e-10
AY453399-1|AAS47516.1|  105|Homo sapiens proliferation-inducing ...    65   3e-10
AL035366-1|CAA23018.1|  105|Homo sapiens hypothetical protein pr...    65   3e-10
AL008583-1|CAA15429.1|  105|Homo sapiens dynein, axonemal, light...    65   3e-10
AK223349-1|BAD97069.1|  105|Homo sapiens dynein light chain 4, a...    64   7e-10
CR542195-1|CAG46992.1|  105|Homo sapiens DNAL4 protein.                63   1e-09
D87685-1|BAA13438.2| 2044|Homo sapiens KIAA0244 protein.               32   2.6  
BC113652-1|AAI13653.1| 2039|Homo sapiens PHD finger protein 3 pr...    32   2.6  
BC113650-1|AAI13651.1| 2039|Homo sapiens PHD finger protein 3 pr...    32   2.6  
AL445676-1|CAI16104.1| 2039|Homo sapiens PHD finger protein 3 pr...    32   2.6  
AL050329-1|CAM45842.1| 2039|Homo sapiens PHD finger protein 3 pr...    32   2.6  
AF091622-1|AAF21292.1| 2039|Homo sapiens PHD finger protein 3 pr...    32   2.6  

>BC010744-1|AAH10744.1|   89|Homo sapiens dynein, light chain,
           LC8-type 2 protein.
          Length = 89

 Score =  167 bits (407), Expect = 3e-41
 Identities = 74/81 (91%), Positives = 79/81 (97%)
 Frame = -1

Query: 755 KXADMSEEMQQDAVDCATQALEXFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTH 576
           K ADMSE+MQQDAVDCATQA+E +NIEKDIAA+IKKEFDKKYNPTWHCIVGRNFGSYVTH
Sbjct: 9   KNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTH 68

Query: 575 ETRHFIYFYLGQVAILLFKSG 513
           ET+HFIYFYLGQVAILLFKSG
Sbjct: 69  ETKHFIYFYLGQVAILLFKSG 89


>AF112997-1|AAP97230.1|   89|Homo sapiens protein inhibitor of
           neuronal nitric oxide synthase protein.
          Length = 89

 Score =  167 bits (407), Expect = 3e-41
 Identities = 74/81 (91%), Positives = 79/81 (97%)
 Frame = -1

Query: 755 KXADMSEEMQQDAVDCATQALEXFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTH 576
           K ADMSE+MQQDAVDCATQA+E +NIEKDIAA+IKKEFDKKYNPTWHCIVGRNFGSYVTH
Sbjct: 9   KNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTH 68

Query: 575 ETRHFIYFYLGQVAILLFKSG 513
           ET+HFIYFYLGQVAILLFKSG
Sbjct: 69  ETKHFIYFYLGQVAILLFKSG 89


>U32944-1|AAB04149.1|   89|Homo sapiens cytoplasmic dynein light
           chain 1 protein.
          Length = 89

 Score =  165 bits (401), Expect = 2e-40
 Identities = 74/81 (91%), Positives = 78/81 (96%)
 Frame = -1

Query: 755 KXADMSEEMQQDAVDCATQALEXFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTH 576
           K ADMSEEMQQD+V+CATQALE +NIEKDIAA IKKEFDKKYNPTWHCIVGRNFGSYVTH
Sbjct: 9   KNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVTH 68

Query: 575 ETRHFIYFYLGQVAILLFKSG 513
           ET+HFIYFYLGQVAILLFKSG
Sbjct: 69  ETKHFIYFYLGQVAILLFKSG 89


>CR542128-1|CAG46925.1|   89|Homo sapiens DNCL1 protein.
          Length = 89

 Score =  165 bits (401), Expect = 2e-40
 Identities = 74/81 (91%), Positives = 78/81 (96%)
 Frame = -1

Query: 755 KXADMSEEMQQDAVDCATQALEXFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTH 576
           K ADMSEEMQQD+V+CATQALE +NIEKDIAA IKKEFDKKYNPTWHCIVGRNFGSYVTH
Sbjct: 9   KNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVTH 68

Query: 575 ETRHFIYFYLGQVAILLFKSG 513
           ET+HFIYFYLGQVAILLFKSG
Sbjct: 69  ETKHFIYFYLGQVAILLFKSG 89


>CR407672-1|CAG28600.1|   89|Homo sapiens DNCL1 protein.
          Length = 89

 Score =  165 bits (401), Expect = 2e-40
 Identities = 74/81 (91%), Positives = 78/81 (96%)
 Frame = -1

Query: 755 KXADMSEEMQQDAVDCATQALEXFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTH 576
           K ADMSEEMQQD+V+CATQALE +NIEKDIAA IKKEFDKKYNPTWHCIVGRNFGSYVTH
Sbjct: 9   KNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVTH 68

Query: 575 ETRHFIYFYLGQVAILLFKSG 513
           ET+HFIYFYLGQVAILLFKSG
Sbjct: 69  ETKHFIYFYLGQVAILLFKSG 89


>BC104245-1|AAI04246.1|   89|Homo sapiens dynein, light chain,
           LC8-type 1 protein.
          Length = 89

 Score =  165 bits (401), Expect = 2e-40
 Identities = 74/81 (91%), Positives = 78/81 (96%)
 Frame = -1

Query: 755 KXADMSEEMQQDAVDCATQALEXFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTH 576
           K ADMSEEMQQD+V+CATQALE +NIEKDIAA IKKEFDKKYNPTWHCIVGRNFGSYVTH
Sbjct: 9   KNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVTH 68

Query: 575 ETRHFIYFYLGQVAILLFKSG 513
           ET+HFIYFYLGQVAILLFKSG
Sbjct: 69  ETKHFIYFYLGQVAILLFKSG 89


>BC104244-1|AAI04245.1|   89|Homo sapiens dynein, light chain,
           LC8-type 1 protein.
          Length = 89

 Score =  165 bits (401), Expect = 2e-40
 Identities = 74/81 (91%), Positives = 78/81 (96%)
 Frame = -1

Query: 755 KXADMSEEMQQDAVDCATQALEXFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTH 576
           K ADMSEEMQQD+V+CATQALE +NIEKDIAA IKKEFDKKYNPTWHCIVGRNFGSYVTH
Sbjct: 9   KNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVTH 68

Query: 575 ETRHFIYFYLGQVAILLFKSG 513
           ET+HFIYFYLGQVAILLFKSG
Sbjct: 69  ETKHFIYFYLGQVAILLFKSG 89


>BC100289-1|AAI00290.1|   89|Homo sapiens dynein, light chain,
           LC8-type 1 protein.
          Length = 89

 Score =  165 bits (401), Expect = 2e-40
 Identities = 74/81 (91%), Positives = 78/81 (96%)
 Frame = -1

Query: 755 KXADMSEEMQQDAVDCATQALEXFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTH 576
           K ADMSEEMQQD+V+CATQALE +NIEKDIAA IKKEFDKKYNPTWHCIVGRNFGSYVTH
Sbjct: 9   KNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVTH 68

Query: 575 ETRHFIYFYLGQVAILLFKSG 513
           ET+HFIYFYLGQVAILLFKSG
Sbjct: 69  ETKHFIYFYLGQVAILLFKSG 89


>CR542177-1|CAG46974.1|  105|Homo sapiens DNAL4 protein.
          Length = 105

 Score = 64.9 bits (151), Expect = 3e-10
 Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
 Frame = -1

Query: 755 KXADMSEEMQQDAVDCATQALEXFNIEKDIAA-FIKKEFDKKYNPTWHCIVGRNFGSYVT 579
           + +DM EEM+ + ++    A E F+   + AA  IK+  DKK+  +WH ++G  FG  +T
Sbjct: 23  RHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFEIT 82

Query: 578 HETRHFIYFYL-GQVAILLFK 519
           HE ++ +Y Y  G +A+ ++K
Sbjct: 83  HEVKNLLYLYFGGTLAVCVWK 103


>CR456487-1|CAG30373.1|  105|Homo sapiens DNAL4 protein.
          Length = 105

 Score = 64.9 bits (151), Expect = 3e-10
 Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
 Frame = -1

Query: 755 KXADMSEEMQQDAVDCATQALEXFNIEKDIAA-FIKKEFDKKYNPTWHCIVGRNFGSYVT 579
           + +DM EEM+ + ++    A E F+   + AA  IK+  DKK+  +WH ++G  FG  +T
Sbjct: 23  RHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFEIT 82

Query: 578 HETRHFIYFYL-GQVAILLFK 519
           HE ++ +Y Y  G +A+ ++K
Sbjct: 83  HEVKNLLYLYFGGTLAVCVWK 103


>BT009847-1|AAP88849.1|  105|Homo sapiens dynein, axonemal, light
           polypeptide 4 protein.
          Length = 105

 Score = 64.9 bits (151), Expect = 3e-10
 Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
 Frame = -1

Query: 755 KXADMSEEMQQDAVDCATQALEXFNIEKDIAA-FIKKEFDKKYNPTWHCIVGRNFGSYVT 579
           + +DM EEM+ + ++    A E F+   + AA  IK+  DKK+  +WH ++G  FG  +T
Sbjct: 23  RHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFEIT 82

Query: 578 HETRHFIYFYL-GQVAILLFK 519
           HE ++ +Y Y  G +A+ ++K
Sbjct: 83  HEVKNLLYLYFGGTLAVCVWK 103


>BC002968-1|AAH02968.1|  105|Homo sapiens dynein, axonemal, light
           chain 4 protein.
          Length = 105

 Score = 64.9 bits (151), Expect = 3e-10
 Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
 Frame = -1

Query: 755 KXADMSEEMQQDAVDCATQALEXFNIEKDIAA-FIKKEFDKKYNPTWHCIVGRNFGSYVT 579
           + +DM EEM+ + ++    A E F+   + AA  IK+  DKK+  +WH ++G  FG  +T
Sbjct: 23  RHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFEIT 82

Query: 578 HETRHFIYFYL-GQVAILLFK 519
           HE ++ +Y Y  G +A+ ++K
Sbjct: 83  HEVKNLLYLYFGGTLAVCVWK 103


>AY453399-1|AAS47516.1|  105|Homo sapiens proliferation-inducing
           protein 27 protein.
          Length = 105

 Score = 64.9 bits (151), Expect = 3e-10
 Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
 Frame = -1

Query: 755 KXADMSEEMQQDAVDCATQALEXFNIEKDIAA-FIKKEFDKKYNPTWHCIVGRNFGSYVT 579
           + +DM EEM+ + ++    A E F+   + AA  IK+  DKK+  +WH ++G  FG  +T
Sbjct: 23  RHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFEIT 82

Query: 578 HETRHFIYFYL-GQVAILLFK 519
           HE ++ +Y Y  G +A+ ++K
Sbjct: 83  HEVKNLLYLYFGGTLAVCVWK 103


>AL035366-1|CAA23018.1|  105|Homo sapiens hypothetical protein
           protein.
          Length = 105

 Score = 64.9 bits (151), Expect = 3e-10
 Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
 Frame = -1

Query: 755 KXADMSEEMQQDAVDCATQALEXFNIEKDIAA-FIKKEFDKKYNPTWHCIVGRNFGSYVT 579
           + +DM EEM+ + ++    A E F+   + AA  IK+  DKK+  +WH ++G  FG  +T
Sbjct: 23  RHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFEIT 82

Query: 578 HETRHFIYFYL-GQVAILLFK 519
           HE ++ +Y Y  G +A+ ++K
Sbjct: 83  HEVKNLLYLYFGGTLAVCVWK 103


>AL008583-1|CAA15429.1|  105|Homo sapiens dynein, axonemal, light
           chain 4 protein.
          Length = 105

 Score = 64.9 bits (151), Expect = 3e-10
 Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
 Frame = -1

Query: 755 KXADMSEEMQQDAVDCATQALEXFNIEKDIAA-FIKKEFDKKYNPTWHCIVGRNFGSYVT 579
           + +DM EEM+ + ++    A E F+   + AA  IK+  DKK+  +WH ++G  FG  +T
Sbjct: 23  RHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFEIT 82

Query: 578 HETRHFIYFYL-GQVAILLFK 519
           HE ++ +Y Y  G +A+ ++K
Sbjct: 83  HEVKNLLYLYFGGTLAVCVWK 103


>AK223349-1|BAD97069.1|  105|Homo sapiens dynein light chain 4,
           axonemal variant protein.
          Length = 105

 Score = 63.7 bits (148), Expect = 7e-10
 Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
 Frame = -1

Query: 755 KXADMSEEMQQDAVDCATQALEXFNIEKDIAA-FIKKEFDKKYNPTWHCIVGRNFGSYVT 579
           + +DM EEM+   ++    A E F+   + AA  IK+  DKK+  +WH ++G  FG  +T
Sbjct: 23  RHSDMPEEMRVGTMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFEIT 82

Query: 578 HETRHFIYFYL-GQVAILLFK 519
           HE ++ +Y Y  G +A+ ++K
Sbjct: 83  HEVKNLLYLYFGGTLAVCVWK 103


>CR542195-1|CAG46992.1|  105|Homo sapiens DNAL4 protein.
          Length = 105

 Score = 62.9 bits (146), Expect = 1e-09
 Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
 Frame = -1

Query: 755 KXADMSEEMQQDAVDCATQALEXFNIEKDIAA-FIKKEFDKKYNPTWHCIVGRNFGSYVT 579
           + +DM EEM+ + ++    A E F+   + AA  I +  DKK+  +WH ++G  FG  +T
Sbjct: 23  RHSDMPEEMRVETMELCVTACEKFSNNNESAAKMINETMDKKFGSSWHVVIGEGFGFEIT 82

Query: 578 HETRHFIYFYL-GQVAILLFK 519
           HE ++ +Y Y  G +A+ ++K
Sbjct: 83  HEVKNLLYLYFGGTLAVCVWK 103


>D87685-1|BAA13438.2| 2044|Homo sapiens KIAA0244 protein.
          Length = 2044

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 307 VKTVHPLSHSLENRSHQH*PCLLLPH 384
           V+   PL+HSL ++SH H  CL  PH
Sbjct: 591 VQIFKPLTHSLSDKSHAHPGCLKEPH 616


>BC113652-1|AAI13653.1| 2039|Homo sapiens PHD finger protein 3
           protein.
          Length = 2039

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 307 VKTVHPLSHSLENRSHQH*PCLLLPH 384
           V+   PL+HSL ++SH H  CL  PH
Sbjct: 586 VQIFKPLTHSLSDKSHAHPGCLKEPH 611


>BC113650-1|AAI13651.1| 2039|Homo sapiens PHD finger protein 3
           protein.
          Length = 2039

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 307 VKTVHPLSHSLENRSHQH*PCLLLPH 384
           V+   PL+HSL ++SH H  CL  PH
Sbjct: 586 VQIFKPLTHSLSDKSHAHPGCLKEPH 611


>AL445676-1|CAI16104.1| 2039|Homo sapiens PHD finger protein 3
           protein.
          Length = 2039

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 307 VKTVHPLSHSLENRSHQH*PCLLLPH 384
           V+   PL+HSL ++SH H  CL  PH
Sbjct: 586 VQIFKPLTHSLSDKSHAHPGCLKEPH 611


>AL050329-1|CAM45842.1| 2039|Homo sapiens PHD finger protein 3
           protein.
          Length = 2039

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 307 VKTVHPLSHSLENRSHQH*PCLLLPH 384
           V+   PL+HSL ++SH H  CL  PH
Sbjct: 586 VQIFKPLTHSLSDKSHAHPGCLKEPH 611


>AF091622-1|AAF21292.1| 2039|Homo sapiens PHD finger protein 3
           protein.
          Length = 2039

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +1

Query: 307 VKTVHPLSHSLENRSHQH*PCLLLPH 384
           V+   PL+HSL ++SH H  CL  PH
Sbjct: 586 VQIFKPLTHSLSDKSHAHPGCLKEPH 611


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,988,246
Number of Sequences: 237096
Number of extensions: 2105870
Number of successful extensions: 7130
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 7042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7121
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -