Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_N08
         (755 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00043-8|AAC77510.1|   89|Caenorhabditis elegans Dynein light ch...   167   1e-41
AC084197-38|AAU87807.1|  186|Caenorhabditis elegans Hypothetical...    85   5e-17
Z68507-5|CAA92827.2|   90|Caenorhabditis elegans Hypothetical pr...    78   6e-15
AL161711-3|CAL63993.1|  129|Caenorhabditis elegans Hypothetical ...    64   1e-10
AL161711-2|CAD31700.1|  111|Caenorhabditis elegans Hypothetical ...    64   1e-10
AL032639-6|CAA21630.1|  405|Caenorhabditis elegans Hypothetical ...    29   4.7  
AF053067-1|AAC35273.1|  405|Caenorhabditis elegans cyclin D prot...    29   4.7  
AL161711-1|CAE17960.1|  134|Caenorhabditis elegans Hypothetical ...    28   8.2  
AC024791-14|AAF60658.1|  767|Caenorhabditis elegans P300/cbp ass...    28   8.2  

>U00043-8|AAC77510.1|   89|Caenorhabditis elegans Dynein light chain
           protein 1 protein.
          Length = 89

 Score =  167 bits (405), Expect = 1e-41
 Identities = 73/81 (90%), Positives = 79/81 (97%)
 Frame = -1

Query: 755 KXADMSEEMQQDAVDCATQALEXFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTH 576
           K ADMS++MQQDA+DCATQALE +NIEKDIAA+IKKEFDKKYNPTWHCIVGRNFGSYVTH
Sbjct: 9   KNADMSDDMQQDAIDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTH 68

Query: 575 ETRHFIYFYLGQVAILLFKSG 513
           ET+HFIYFYLGQVAILLFKSG
Sbjct: 69  ETKHFIYFYLGQVAILLFKSG 89


>AC084197-38|AAU87807.1|  186|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.43 protein.
          Length = 186

 Score = 85.0 bits (201), Expect = 5e-17
 Identities = 34/76 (44%), Positives = 52/76 (68%)
 Frame = -1

Query: 743 MSEEMQQDAVDCATQALEXFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRH 564
           M   M+Q+A   A +++  +++E DIA  +K  FD++Y P WHCI G++FGS+VT E   
Sbjct: 65  MPRHMEQEACSLAAKSIMTYHLEHDIARHLKMAFDREYGPDWHCICGKHFGSFVTFEPDS 124

Query: 563 FIYFYLGQVAILLFKS 516
           FIYF +G +A +LFK+
Sbjct: 125 FIYFRIGTIAFMLFKT 140


>Z68507-5|CAA92827.2|   90|Caenorhabditis elegans Hypothetical
           protein M18.2 protein.
          Length = 90

 Score = 78.2 bits (184), Expect = 6e-15
 Identities = 32/81 (39%), Positives = 50/81 (61%)
 Frame = -1

Query: 755 KXADMSEEMQQDAVDCATQALEXFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTH 576
           K  DM +  +   +    +A   +NI+KD+AAF+K+E DKK+  TWH I G+ FGS V++
Sbjct: 9   KETDMEDPQRDMVISVVREAQRLYNIDKDVAAFVKEELDKKFGATWHVICGKCFGSRVSY 68

Query: 575 ETRHFIYFYLGQVAILLFKSG 513
           E  HFI     +V ++++K G
Sbjct: 69  EMGHFILLKCNKVNVMIYKCG 89


>AL161711-3|CAL63993.1|  129|Caenorhabditis elegans Hypothetical
           protein Y10G11A.2b protein.
          Length = 129

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 27/72 (37%), Positives = 48/72 (66%)
 Frame = -1

Query: 734 EMQQDAVDCATQALEXFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIY 555
           E  +++      AL+   IE +IA+F+K++FD KY   W C+VGRNFGS++  +   FI+
Sbjct: 60  EQVEESKKMLGDALQLCGIENEIASFMKRKFDAKYGGHWQCVVGRNFGSHL--DPIQFIH 117

Query: 554 FYLGQVAILLFK 519
           F + +++++LF+
Sbjct: 118 FTVSKISVILFR 129


>AL161711-2|CAD31700.1|  111|Caenorhabditis elegans Hypothetical
           protein Y10G11A.2a protein.
          Length = 111

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 27/72 (37%), Positives = 48/72 (66%)
 Frame = -1

Query: 734 EMQQDAVDCATQALEXFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIY 555
           E  +++      AL+   IE +IA+F+K++FD KY   W C+VGRNFGS++  +   FI+
Sbjct: 42  EQVEESKKMLGDALQLCGIENEIASFMKRKFDAKYGGHWQCVVGRNFGSHL--DPIQFIH 99

Query: 554 FYLGQVAILLFK 519
           F + +++++LF+
Sbjct: 100 FTVSKISVILFR 111


>AL032639-6|CAA21630.1|  405|Caenorhabditis elegans Hypothetical
           protein Y38F1A.5 protein.
          Length = 405

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = +1

Query: 598 LRPTMQCQVGLYFLSN 645
           L P+MQC +GLY++SN
Sbjct: 242 LFPSMQCAIGLYYVSN 257


>AF053067-1|AAC35273.1|  405|Caenorhabditis elegans cyclin D
           protein.
          Length = 405

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = +1

Query: 598 LRPTMQCQVGLYFLSN 645
           L P+MQC +GLY++SN
Sbjct: 242 LFPSMQCAIGLYYVSN 257


>AL161711-1|CAE17960.1|  134|Caenorhabditis elegans Hypothetical
           protein Y10G11A.3 protein.
          Length = 134

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -1

Query: 734 EMQQDAVDCATQALEXFNIEKDIAAFIKKEFDKK 633
           E  +++      AL+   IE +IA+F+K++FD K
Sbjct: 59  EQVEESKKMLGDALQLCGIENEIASFMKRKFDAK 92


>AC024791-14|AAF60658.1|  767|Caenorhabditis elegans P300/cbp
           associated factor homologprotein 1 protein.
          Length = 767

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +3

Query: 450 YPSDNTASAANKKIEVMLNGLTALKEQYSHLSQVEVDEVASLVCHIRAKI 599
           Y  D    + + KI  +L  LTA K  +   S V+V EV     HI+  I
Sbjct: 642 YHLDERDDSLDSKIGAILKKLTADKNAWPFASPVDVKEVPEYYDHIKHPI 691


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,999,067
Number of Sequences: 27780
Number of extensions: 316315
Number of successful extensions: 661
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)