Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_N06
(696 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456886-1|CAG33167.1| 308|Homo sapiens COPE protein. 180 4e-45
BC017285-1|AAH17285.1| 308|Homo sapiens coatomer protein comple... 180 4e-45
BC007250-1|AAH07250.1| 308|Homo sapiens coatomer protein comple... 180 4e-45
BC003155-1|AAH03155.1| 308|Homo sapiens coatomer protein comple... 180 4e-45
AJ249366-1|CAB55628.1| 308|Homo sapiens epsilon-COP protein pro... 180 4e-45
AF092438-1|AAP97213.1| 307|Homo sapiens epsilon-COP protein. 180 4e-45
AC005197-2|AAC24612.1| 245|Homo sapiens COPE_HUMAN protein. 180 4e-45
AK222584-1|BAD96304.1| 308|Homo sapiens epsilon subunit of coat... 180 6e-45
AJ131182-1|CAA10316.1| 308|Homo sapiens Epsilon COP protein. 179 8e-45
AC002985-1|AAB81543.1| 147|Homo sapiens epsilon-COP protein. 60 6e-09
BC126459-1|AAI26460.1| 257|Homo sapiens chromosome 10 open read... 30 6.9
AL121928-10|CAI12523.1| 257|Homo sapiens novel protein protein. 30 6.9
AK024342-1|BAB14892.1| 257|Homo sapiens protein ( Homo sapiens ... 30 6.9
AF010315-1|AAC39533.1| 177|Homo sapiens Pig11 protein. 30 9.1
>CR456886-1|CAG33167.1| 308|Homo sapiens COPE protein.
Length = 308
Score = 180 bits (438), Expect = 4e-45
Identities = 90/226 (39%), Positives = 135/226 (59%)
Frame = -3
Query: 694 QPLKSLVDYLXPDANKSAIVADIDARVAKGTELSNEIXLIVAATIYYHEDNYEAALKILH 515
Q ++ DYL ++ + +IVA++D +++ +++N L++AA+IY H+ N +AAL+ LH
Sbjct: 82 QAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALH 141
Query: 514 NAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDA 335
+SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA
Sbjct: 142 QGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDA 201
Query: 334 HYSVMELSEXXXXXXXXXXXXXXXXXXXXGMWEEAEQQLTDAASRAPQXXXXXXXXXXXX 155
+Y E+++ G WE AE L +A +
Sbjct: 202 YYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLS 260
Query: 154 XXXGKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQP 17
GKPPEV+ RYL+QL D+H HPF+KEY+AK ++F RL QY P
Sbjct: 261 QHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAP 306
>BC017285-1|AAH17285.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 180 bits (438), Expect = 4e-45
Identities = 90/226 (39%), Positives = 135/226 (59%)
Frame = -3
Query: 694 QPLKSLVDYLXPDANKSAIVADIDARVAKGTELSNEIXLIVAATIYYHEDNYEAALKILH 515
Q ++ DYL ++ + +IVA++D +++ +++N L++AA+IY H+ N +AAL+ LH
Sbjct: 82 QAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALH 141
Query: 514 NAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDA 335
+SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA
Sbjct: 142 QGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDA 201
Query: 334 HYSVMELSEXXXXXXXXXXXXXXXXXXXXGMWEEAEQQLTDAASRAPQXXXXXXXXXXXX 155
+Y E+++ G WE AE L +A +
Sbjct: 202 YYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLS 260
Query: 154 XXXGKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQP 17
GKPPEV+ RYL+QL D+H HPF+KEY+AK ++F RL QY P
Sbjct: 261 QHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAP 306
>BC007250-1|AAH07250.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 180 bits (438), Expect = 4e-45
Identities = 90/226 (39%), Positives = 135/226 (59%)
Frame = -3
Query: 694 QPLKSLVDYLXPDANKSAIVADIDARVAKGTELSNEIXLIVAATIYYHEDNYEAALKILH 515
Q ++ DYL ++ + +IVA++D +++ +++N L++AA+IY H+ N +AAL+ LH
Sbjct: 82 QAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALH 141
Query: 514 NAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDA 335
+SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA
Sbjct: 142 QGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDA 201
Query: 334 HYSVMELSEXXXXXXXXXXXXXXXXXXXXGMWEEAEQQLTDAASRAPQXXXXXXXXXXXX 155
+Y E+++ G WE AE L +A +
Sbjct: 202 YYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLS 260
Query: 154 XXXGKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQP 17
GKPPEV+ RYL+QL D+H HPF+KEY+AK ++F RL QY P
Sbjct: 261 QHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAP 306
>BC003155-1|AAH03155.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 180 bits (438), Expect = 4e-45
Identities = 90/226 (39%), Positives = 135/226 (59%)
Frame = -3
Query: 694 QPLKSLVDYLXPDANKSAIVADIDARVAKGTELSNEIXLIVAATIYYHEDNYEAALKILH 515
Q ++ DYL ++ + +IVA++D +++ +++N L++AA+IY H+ N +AAL+ LH
Sbjct: 82 QAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALH 141
Query: 514 NAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDA 335
+SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA
Sbjct: 142 QGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDA 201
Query: 334 HYSVMELSEXXXXXXXXXXXXXXXXXXXXGMWEEAEQQLTDAASRAPQXXXXXXXXXXXX 155
+Y E+++ G WE AE L +A +
Sbjct: 202 YYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLS 260
Query: 154 XXXGKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQP 17
GKPPEV+ RYL+QL D+H HPF+KEY+AK ++F RL QY P
Sbjct: 261 QHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAP 306
>AJ249366-1|CAB55628.1| 308|Homo sapiens epsilon-COP protein
protein.
Length = 308
Score = 180 bits (438), Expect = 4e-45
Identities = 90/226 (39%), Positives = 135/226 (59%)
Frame = -3
Query: 694 QPLKSLVDYLXPDANKSAIVADIDARVAKGTELSNEIXLIVAATIYYHEDNYEAALKILH 515
Q ++ DYL ++ + +IVA++D +++ +++N L++AA+IY H+ N +AAL+ LH
Sbjct: 82 QAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALH 141
Query: 514 NAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDA 335
+SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA
Sbjct: 142 QGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDA 201
Query: 334 HYSVMELSEXXXXXXXXXXXXXXXXXXXXGMWEEAEQQLTDAASRAPQXXXXXXXXXXXX 155
+Y E+++ G WE AE L +A +
Sbjct: 202 YYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLS 260
Query: 154 XXXGKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQP 17
GKPPEV+ RYL+QL D+H HPF+KEY+AK ++F RL QY P
Sbjct: 261 QHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAP 306
>AF092438-1|AAP97213.1| 307|Homo sapiens epsilon-COP protein.
Length = 307
Score = 180 bits (438), Expect = 4e-45
Identities = 90/226 (39%), Positives = 135/226 (59%)
Frame = -3
Query: 694 QPLKSLVDYLXPDANKSAIVADIDARVAKGTELSNEIXLIVAATIYYHEDNYEAALKILH 515
Q ++ DYL ++ + +IVA++D +++ +++N L++AA+IY H+ N +AAL+ LH
Sbjct: 81 QAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALH 140
Query: 514 NAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDA 335
+SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA
Sbjct: 141 QGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDA 200
Query: 334 HYSVMELSEXXXXXXXXXXXXXXXXXXXXGMWEEAEQQLTDAASRAPQXXXXXXXXXXXX 155
+Y E+++ G WE AE L +A +
Sbjct: 201 YYIFQEMAD-KCSPTLLLLNGQAACHIAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLS 259
Query: 154 XXXGKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQP 17
GKPPEV+ RYL+QL D+H HPF+KEY+AK ++F RL QY P
Sbjct: 260 QHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAP 305
>AC005197-2|AAC24612.1| 245|Homo sapiens COPE_HUMAN protein.
Length = 245
Score = 180 bits (438), Expect = 4e-45
Identities = 90/226 (39%), Positives = 135/226 (59%)
Frame = -3
Query: 694 QPLKSLVDYLXPDANKSAIVADIDARVAKGTELSNEIXLIVAATIYYHEDNYEAALKILH 515
Q ++ DYL ++ + +IVA++D +++ +++N L++AA+IY H+ N +AAL+ LH
Sbjct: 19 QAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALH 78
Query: 514 NAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDA 335
+SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA
Sbjct: 79 QGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDA 138
Query: 334 HYSVMELSEXXXXXXXXXXXXXXXXXXXXGMWEEAEQQLTDAASRAPQXXXXXXXXXXXX 155
+Y E+++ G WE AE L +A +
Sbjct: 139 YYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLS 197
Query: 154 XXXGKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQP 17
GKPPEV+ RYL+QL D+H HPF+KEY+AK ++F RL QY P
Sbjct: 198 QHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAP 243
>AK222584-1|BAD96304.1| 308|Homo sapiens epsilon subunit of
coatomer protein complex isoform a variant protein.
Length = 308
Score = 180 bits (437), Expect = 6e-45
Identities = 90/226 (39%), Positives = 135/226 (59%)
Frame = -3
Query: 694 QPLKSLVDYLXPDANKSAIVADIDARVAKGTELSNEIXLIVAATIYYHEDNYEAALKILH 515
Q ++ DYL ++ + +IVA++D +++ +++N L++AA+IY H+ N +AAL+ LH
Sbjct: 82 QAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALH 141
Query: 514 NAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDA 335
+SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA
Sbjct: 142 QGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDA 201
Query: 334 HYSVMELSEXXXXXXXXXXXXXXXXXXXXGMWEEAEQQLTDAASRAPQXXXXXXXXXXXX 155
+Y E+++ G WE AE L +A +
Sbjct: 202 YYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSCYPETLVNLIVLS 260
Query: 154 XXXGKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQP 17
GKPPEV+ RYL+QL D+H HPF+KEY+AK ++F RL QY P
Sbjct: 261 QHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAP 306
>AJ131182-1|CAA10316.1| 308|Homo sapiens Epsilon COP protein.
Length = 308
Score = 179 bits (436), Expect = 8e-45
Identities = 90/226 (39%), Positives = 135/226 (59%)
Frame = -3
Query: 694 QPLKSLVDYLXPDANKSAIVADIDARVAKGTELSNEIXLIVAATIYYHEDNYEAALKILH 515
Q ++ DYL ++ + +IVA++D +++ +++N L++AA+IY H+ N +AAL+ LH
Sbjct: 82 QAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNITFLLMAASIYLHDQNPDAALRALH 141
Query: 514 NAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDA 335
+SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA
Sbjct: 142 QGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDA 201
Query: 334 HYSVMELSEXXXXXXXXXXXXXXXXXXXXGMWEEAEQQLTDAASRAPQXXXXXXXXXXXX 155
+Y E+++ G WE AE L +A +
Sbjct: 202 YYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLS 260
Query: 154 XXXGKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQP 17
GKPPEV+ RYL+QL D+H HPF+KEY+AK ++F RL QY P
Sbjct: 261 QHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAP 306
>AC002985-1|AAB81543.1| 147|Homo sapiens epsilon-COP protein.
Length = 147
Score = 60.5 bits (140), Expect = 6e-09
Identities = 24/66 (36%), Positives = 45/66 (68%)
Frame = -3
Query: 694 QPLKSLVDYLXPDANKSAIVADIDARVAKGTELSNEIXLIVAATIYYHEDNYEAALKILH 515
Q ++ DYL ++ + +IVA++D +++ +++N L++AA+IY H+ N +AAL+ LH
Sbjct: 82 QAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALH 141
Query: 514 NAESLE 497
+SLE
Sbjct: 142 QGDSLE 147
>BC126459-1|AAI26460.1| 257|Homo sapiens chromosome 10 open reading
frame 95 protein.
Length = 257
Score = 30.3 bits (65), Expect = 6.9
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = -1
Query: 186 PTCCSALRSPRRISGNHRR-CRP-DTWP 109
P C+A R P R SG RR C P TWP
Sbjct: 46 PCMCTAGRRPNRASGRRRRSCSPAPTWP 73
>AL121928-10|CAI12523.1| 257|Homo sapiens novel protein protein.
Length = 257
Score = 30.3 bits (65), Expect = 6.9
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = -1
Query: 186 PTCCSALRSPRRISGNHRR-CRP-DTWP 109
P C+A R P R SG RR C P TWP
Sbjct: 46 PCMCTAGRRPNRASGRRRRSCSPAPTWP 73
>AK024342-1|BAB14892.1| 257|Homo sapiens protein ( Homo sapiens
cDNA FLJ14280 fis, clone PLACE1005584, weakly similar to
TRANS-ACTING TRANSCRIPTIONAL PROTEIN ICP0. ).
Length = 257
Score = 30.3 bits (65), Expect = 6.9
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = -1
Query: 186 PTCCSALRSPRRISGNHRR-CRP-DTWP 109
P C+A R P R SG RR C P TWP
Sbjct: 46 PCMCTAGRRPNRASGRRRRSCSPAPTWP 73
>AF010315-1|AAC39533.1| 177|Homo sapiens Pig11 protein.
Length = 177
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -1
Query: 204 PAPHSTPTCCSALRSPRRISGNHR-RCRP 121
P P P CC AL PR + +HR C P
Sbjct: 127 PLPKELPPCCRALVWPRATTASHRHHCLP 155
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,465,950
Number of Sequences: 237096
Number of extensions: 2020469
Number of successful extensions: 5264
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5248
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -